Merge pull request #3 from PhysiciansDataCollaborative/dev

Added 3rd Next

3rdNext_import.sh

@@ -0,0 +1,25 @@
+#!/bin/bash
+#
+# Import 3rd Next
+#
+#
+# Exit on errors or uninitialized variables
+set -e -o nounset
+
+
+# Start in data folder
+#
+cd /data/3rdNext
+
+
+# Create a list of text files
+#
+FILES=$(find . -maxdepth 1 -type f -name "*.txt")
+
+
+# Import each text file and move it to archived
+#
+for f in ${FILES}
+do
+  mongoimport --db query_composer_development --collection thirdnexts --type json --file ${f}
+done

filterProviders.js

@@ -0,0 +1,47 @@
+/*
+* Filters out providers based on id's and the initiative they are in.
+*
+* @param providerId {string} - the provider identifier to filter against.
+* @param initiative {string} - the initiative identifier. One of: 
+*       - "PPh" : polypharmacy
+* 
+* @returns - true if the provider is part of the specified initiative
+*               false otherwise. 
+*/
+function filterProviders(providerId, initiative){
+
+    //check that we have valid inputs
+    if ( !providerId  || !initiative ) {
+
+        return false; 
+
+    }
+
+    var inits = {
+
+        "PPh" : [
+            "cpsid",  //currently contains some test values.
+            "PROVIDER1",
+            "PROVIDER2"
+        ]
+    }; 
+
+
+    //check that the initiative is valid.
+    if ( inits[initiative] === undefined ){
+
+        return false; 
+
+    }
+
+    if( inits[initiative].indexOf(providerId) > -1 ){
+
+        return true;
+
+    }else{
+
+        return false; 
+
+    }
+
+}

mongodb_init.sh

@@ -13,12 +13,19 @@ set -e -o nounset
 sleep 5
 
 
+# Create thirdnexts collection
+#
+mongo query_composer_development --eval 'db.createCollection("thirdnexts")'
+
+
 # Set db keys to prevent duplicates
 #
 mongo query_composer_development --eval \
   'printjson( db.users.ensureIndex({ username : 1 }, { unique : true }))'
 mongo query_composer_development --eval \
   'printjson( db.endpoints.ensureIndex({ base_url : 1 }, { unique : true }))'
+mongo query_composer_development --eval \
+  'printjson( db.thirdnexts.ensureIndex({ clinic: 1, date:1 }, { unique: true }))'
 
 
 # Import admin and user accounts

provider_add.sh

@@ -0,0 +1,43 @@
+#!/bin/bash
+#
+# Halt on errors or uninitialized variables
+#
+set -e -o nounset
+
+
+# Expected input
+#
+# $0 this script
+# $1 Doctor (clinician) ID
+
+
+# Check parameters
+#
+if([ $# -lt 1 ]||[ $# -gt 1 ])
+then
+        echo
+        echo "Unexpected number of parameters."
+        echo
+        echo "Usage: providers_add.sh [doctorID]"
+        echo
+        exit
+fi
+
+
+# Set variables from parameters
+#
+DOCTOR=${1}
+
+
+# Get script directory and target file
+#
+DIR=$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )
+TARGET=${DIR}/providers.txt
+
+
+# Add provider
+#
+if(! grep --quiet ${DOCTOR} ${TARGET} )
+then
+        echo ${DOCTOR} | sudo tee -a ${TARGET}
+fi

providers.txt

@@ -0,0 +1,4 @@
+# List provider IDs here
+#
+cpsid
+91604