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In this folder, you will find all the codes which were used to create the database from the files that the researchers of each group sent to the I2D.


Note: in the future we will integrate the code for building the database from the data publicly available from the I2D.


  1. file reinitialize_base.R is a R script which calls all the main operation on the databases (it calls SQL files and render rmarkdown documents containing the codes for building the database)
  2. file rawdata.Rmd contains the codes to read raw files
  3. file taxonomy.Rmd contains the codes to treat taxonomy of every group
  4. file integración_estructura_muestreo.Rmd contains the code to integrate all the main data of every group in the database structure
  5. file correction_misc.Rmd contains supplementary corrections which have been made on the raw data
  6. file datos_registros_suplementarios.Rmd contains the treatment of supplementary data which have been integrated in the database for some groups
  7. file puntos_referencia_habitats.Rmd contains the integration of spatial habitat data
  8. file variables_ambientales.Rmd contains the reading and importing of environmental variables
  9. file exportación_datos.Rmd contains the creation of VIEWS for exporting treatable data for each group