DeepRVAT Tests 🧑🏼💻✅ #562
Workflow file for this run
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| name: DeepRVAT test runner | |
| run-name: DeepRVAT Tests 🧑🏼💻✅ | |
| on: [ push ] | |
| jobs: | |
| DeepRVAT-Tests-Runner: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - uses: mamba-org/setup-micromamba@v1.8.0 | |
| with: | |
| environment-name: deeprvat-preprocess-gh-action | |
| environment-file: ${{ github.workspace }}/deeprvat_env_no_gpu.yml | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Install DeepRVAT | |
| run: pip install -e ${{ github.workspace }} | |
| shell: micromamba-shell {0} | |
| - name: Run pytest deeprvat | |
| run: pytest -v ${{ github.workspace }}/tests/deeprvat | |
| shell: micromamba-shell {0} | |
| DeepRVAT-Tests-Runner-Preprocessing: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - uses: mamba-org/setup-micromamba@v1.8.0 | |
| with: | |
| environment-name: deeprvat-preprocess-gh-action | |
| environment-file: ${{ github.workspace }}/deeprvat_preprocessing_env.yml | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Install DeepRVAT | |
| run: pip install -e ${{ github.workspace }} | |
| shell: micromamba-shell {0} | |
| - name: Run pytest preprocessing | |
| run: pytest -v ${{ github.workspace }}/tests/preprocessing | |
| shell: micromamba-shell {0} | |
| DeepRVAT-Tests-Runner-Annotations: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - uses: mamba-org/setup-micromamba@v1.8.0 | |
| with: | |
| environment-name: deeprvat-annotation-gh-action | |
| environment-file: ${{ github.workspace }}/deeprvat_annotations.yml | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Install DeepRVAT | |
| run: pip install -e ${{ github.workspace }} | |
| shell: micromamba-shell {0} | |
| - name: Run pytest annotations | |
| run: pytest -v ${{ github.workspace }}/tests/annotations | |
| shell: micromamba-shell {0} |