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bug fix
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bfclarke committed Feb 21, 2024
1 parent 52b66e5 commit 039bd74
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion dnanexus/deeprvat_compute_burdens/src/run.sh
Original file line number Diff line number Diff line change
Expand Up @@ -45,7 +45,7 @@ main() {
python deeprvat/deeprvat/deeprvat/associate.py compute-burdens \
--n-chunks $n_chunks --chunk $chunk \
--dataset-file $BASE/$expdir/Calcium/deeprvat/association_dataset.pkl \
$BASE/workdir/pretrained_scoring/Calcium/deeprvat/hpopt_config.yaml \
$BASE/$expdir/Calcium/deeprvat/hpopt_config.yaml \
$BASE/$expdir/pretrained_models/config.yaml \
$BASE/$expdir/pretrained_models/repeat_0/best/bag_0.ckpt $BASE/$expdir/pretrained_models/repeat_1/best/bag_0.ckpt $BASE/$expdir/pretrained_models/repeat_2/best/bag_0.ckpt $BASE/$expdir/pretrained_models/repeat_3/best/bag_0.ckpt $BASE/$expdir/pretrained_models/repeat_4/best/bag_0.ckpt $BASE/$expdir/pretrained_models/repeat_5/best/bag_0.ckpt \
Calcium/deeprvat/burdens_chunk_$chunk
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