Rename to pca_matrix

PMBio · Oct 18, 2023 · 0c45bf4 · 0c45bf4
1 parent c723aa0
commit 0c45bf4
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/pipelines/annotations.snakefile b/pipelines/annotations.snakefile
@@ -278,9 +278,9 @@ rule deepSea_PCA:
                 "python",
                 f"{annotation_python_file}",
                 "deepsea-pca",
-                "--n-components 100",
+                "--n-components 10", # TODO read from config?
                 "{input}",
-                str(anno_dir / "deepSea_pca"/ "pca.pkl"),
+                str(anno_dir / "deepSea_pca"/ "pca_matrix"),
                 str(anno_dir / "deepSea_pca"),
             ]
         )