From 0c45bf42f8a1f08f46f69140769fa141ac44453f Mon Sep 17 00:00:00 2001 From: Magnus Wahlberg Date: Wed, 18 Oct 2023 15:48:34 +0200 Subject: [PATCH] Rename to pca_matrix --- pipelines/annotations.snakefile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pipelines/annotations.snakefile b/pipelines/annotations.snakefile index 07d28df8..83beca76 100644 --- a/pipelines/annotations.snakefile +++ b/pipelines/annotations.snakefile @@ -278,9 +278,9 @@ rule deepSea_PCA: "python", f"{annotation_python_file}", "deepsea-pca", - "--n-components 100", + "--n-components 10", # TODO read from config? "{input}", - str(anno_dir / "deepSea_pca"/ "pca.pkl"), + str(anno_dir / "deepSea_pca"/ "pca_matrix"), str(anno_dir / "deepSea_pca"), ] )