fix evaluation alpha key

PMBio · May 29, 2024 · 0dd831d · 0dd831d
1 parent f56b90a
commit 0dd831d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/deeprvat/deeprvat/config.py b/deeprvat/deeprvat/config.py
@@ -324,7 +324,7 @@ def update_config(
             else:
                 logger.info("Not performing EAC filtering of baseline results")
             logger.info(f"  Correcting p-values using {correction_method} method")
-            alpha = config["baseline_results"].get("alpha_seed_genes", config.get("alpha"))
+            alpha = config["baseline_results"].get("alpha_seed_genes", config["evaluation"].get("alpha"))
             baseline_df = pval_correction(
                 baseline_df, alpha, correction_type=correction_method
             )