From 15f50bc2a2f5809f1f12cf235b3e638aeb11b054 Mon Sep 17 00:00:00 2001 From: Magnus Wahlberg Date: Fri, 13 Oct 2023 16:37:40 +0200 Subject: [PATCH] Fix snakemake typos --- pipelines/annotations.snakefile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pipelines/annotations.snakefile b/pipelines/annotations.snakefile index 651dcf01..8d3f17e3 100644 --- a/pipelines/annotations.snakefile +++ b/pipelines/annotations.snakefile @@ -111,7 +111,7 @@ rule aggregate_and_merge_absplice: ), current_annotation_file=anno_dir / "vep_deepripe_deepsea.parquet" output: - annotations=anno_dir / "vcomplete_annotations.parquet.parquet" + annotations=anno_dir / "vcomplete_annotations.parquet.parquet", scores=anno_tmp_dir / "abSplice_score_file.parquet", shell: @@ -129,7 +129,7 @@ rule aggregate_and_merge_absplice: rule merge_deepsea_pcas: input: - annotations=anno_dir / "vep_deepripe.parquet" + annotations=anno_dir / "vep_deepripe.parquet", deepsea_pcas=anno_dir / "deepSea_pca" / "deepsea_pca.parquet", output: anno_dir / "vep_deepripe_deepsea.parquet"