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Fix githubaction yaml
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endast committed Dec 14, 2023
1 parent e0e67cd commit 6aa160c
Showing 1 changed file with 6 additions and 8 deletions.
14 changes: 6 additions & 8 deletions .github/workflows/test-runner.yml
Original file line number Diff line number Diff line change
@@ -1,12 +1,11 @@
name: DeepRVAT test runner
run-name: DeepRVAT Tests πŸ§‘πŸΌβ€πŸ’»βœ…
on: [ push ]
​

jobs:
DeepRVAT-Tests-Runner:
runs-on: ubuntu-latest
steps:
​
- name: Check out repository code
uses: actions/checkout@v3
- uses: mamba-org/setup-micromamba@v1.4.3
Expand All @@ -15,19 +14,18 @@ jobs:
environment-file: ${{ github.workspace }}/deeprvat_env_no_gpu.yml
cache-environment: true
cache-downloads: true
​

- name: Install DeepRVAT
run: pip install -e ${{ github.workspace }}
shell: micromamba-shell {0}
​
- name: Run pytest deeprvat
run: pytest -v ${{ github.workspace }}/tests/deeprvat
shell: micromamba-shell {0}
​

DeepRVAT-Tests-Runner-Preprocessing:
runs-on: ubuntu-latest
steps:
​

- name: Check out repository code
uses: actions/checkout@v3
- uses: mamba-org/setup-micromamba@v1.4.3
Expand All @@ -36,11 +34,11 @@ jobs:
environment-file: ${{ github.workspace }}/deeprvat_preprocessing_env.yml
cache-environment: true
cache-downloads: true
​

- name: Install DeepRVAT
run: pip install -e ${{ github.workspace }}
shell: micromamba-shell {0}
​

- name: Run pytest preprocessing
run: pytest -v ${{ github.workspace }}/tests/preprocessing
shell: micromamba-shell {0}

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