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corrected corrupt sphinx docstring
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Marcel-Mueck authored Feb 26, 2024
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Showing 1 changed file with 8 additions and 8 deletions.
16 changes: 8 additions & 8 deletions deeprvat/annotations/annotations.py
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Expand Up @@ -1086,16 +1086,16 @@ def deepripe_score_variant_onlyseq_all(
Compute variant scores using a deep learning model for each specified variant.
Parameters:
- model_group (dict): A dictionary containing deep learning models for different choices. Each entry should be a key-value pair, where the key is the choice name and the value is a tuple containing the model and additional information.
- variant_bed (list): A list of variant bedlines, where each bedline represents a variant.
- genomefasta (str): Path to the reference genome in FASTA format.
- seq_len (int, optional): The length of the sequence to use around each variant. Default is 200.
- batch_size (int, optional): Batch size for parallelization. Default is 1024.
- n_jobs (int, optional): Number of parallel jobs for processing variant bedlines. Default is 32.
- model_group (dict): A dictionary containing deep learning models for different choices. Each entry should be a key-value pair, where the key is the choice name and the value is a tuple containing the model and additional information.
- variant_bed (list): A list of variant bedlines, where each bedline represents a variant.
- genomefasta (str): Path to the reference genome in FASTA format.
- seq_len (int, optional): The length of the sequence to use around each variant. Default is 200.
- batch_size (int, optional): Batch size for parallelization. Default is 1024.
- n_jobs (int, optional): Number of parallel jobs for processing variant bedlines. Default is 32.
Returns:
dict: A dictionary containing variant scores for each choice in the model_group.
Each entry has the choice name as the key and the corresponding scores as the value.
dict: A dictionary containing variant scores for each choice in the model_group.
Each entry has the choice name as the key and the corresponding scores as the value.
"""
predictions = {}

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