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Update deeprvat_annotation_config.yaml
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Marcel-Mueck authored Feb 20, 2024
1 parent 8f3560e commit cd217f5
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion pipelines/config/deeprvat_annotation_config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -31,6 +31,6 @@ preprocessing_workdir : preprocessing_workdir
additional_vep_plugin_cmds:
cadd : CADD,annotation_data/cadd/whole_genome_SNVs.tsv.gz,annotation_data/cadd/gnomad.genomes.r3.0.indel.tsv.gz
spliceAI : SpliceAI,snv=annotation_data/spliceAI/spliceai_scores.raw.snv.hg38.vcf.gz,indel=annotation_data/spliceAI/spliceai_scores.raw.indel.hg38.vcf.gz
primateAI : PrimateAI,PrimateAI,annotation_data/primateAI/PrimateAI_scores_v0.2_GRCh38_sorted.tsv.bgz
primateAI : PrimateAI,annotation_data/primateAI/PrimateAI_scores_v0.2_GRCh38_sorted.tsv.bgz
condel: Condel,repo_dir/ensembl-vep/Plugin/config/Condel/config,s,2
alphamissense : AlphaMissense,file=annotation_data/AlphaMissense/AlphaMissense_hg38.tsv.gz

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