From cd217f551ac324bdb9376ecdf11702675519b904 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Marcel=20M=C3=BCck?= Date: Tue, 20 Feb 2024 10:52:20 +0100 Subject: [PATCH] Update deeprvat_annotation_config.yaml --- pipelines/config/deeprvat_annotation_config.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pipelines/config/deeprvat_annotation_config.yaml b/pipelines/config/deeprvat_annotation_config.yaml index 145b37b7..cc7ffb17 100644 --- a/pipelines/config/deeprvat_annotation_config.yaml +++ b/pipelines/config/deeprvat_annotation_config.yaml @@ -31,6 +31,6 @@ preprocessing_workdir : preprocessing_workdir additional_vep_plugin_cmds: cadd : CADD,annotation_data/cadd/whole_genome_SNVs.tsv.gz,annotation_data/cadd/gnomad.genomes.r3.0.indel.tsv.gz spliceAI : SpliceAI,snv=annotation_data/spliceAI/spliceai_scores.raw.snv.hg38.vcf.gz,indel=annotation_data/spliceAI/spliceai_scores.raw.indel.hg38.vcf.gz - primateAI : PrimateAI,PrimateAI,annotation_data/primateAI/PrimateAI_scores_v0.2_GRCh38_sorted.tsv.bgz + primateAI : PrimateAI,annotation_data/primateAI/PrimateAI_scores_v0.2_GRCh38_sorted.tsv.bgz condel: Condel,repo_dir/ensembl-vep/Plugin/config/Condel/config,s,2 alphamissense : AlphaMissense,file=annotation_data/AlphaMissense/AlphaMissense_hg38.tsv.gz