diff --git a/pipelines/config/deeprvat_annotation_config.yaml b/pipelines/config/deeprvat_annotation_config.yaml index 35aec1c7..f76348eb 100644 --- a/pipelines/config/deeprvat_annotation_config.yaml +++ b/pipelines/config/deeprvat_annotation_config.yaml @@ -25,7 +25,7 @@ cadd_snv_file : annotation_data/cadd/whole_genome_SNVs.tsv.gz cadd_indel_file : annotation_data/cadd/gnomad.genomes.r3.0.indel.tsv.gz absplice_repo_dir : repo_dir/absplice deeprvat_repo_dir : deeprvat_repo_dir -kipoi_repo_dir : repo_dir/kipoi-veff2 +kipoiveff_repo_dir : repo_dir/kipoi-veff2 variant_file_path : preprocessing_workdir/norm/variants/variants.tsv.gz pybedtools_tmp_path : output_dir/annotations/tmp/pybedtools n_jobs_deepripe : 32