From 9fe7df6decf92161a443d8334307c630da23d884 Mon Sep 17 00:00:00 2001
From: Danilo Horta <danilo.horta@gmail.com>
Date: Tue, 12 Apr 2016 12:56:00 +0100
Subject: [PATCH] Proper bash wget inline installation.

---
 .bumpversion.cfg         | 2 +-
 README.md                | 6 +++---
 conda-recipe/meta.yaml   | 2 +-
 deploy/apt_limix_install | 6 ++----
 deploy/test.pypi.apt     | 2 +-
 deploy/test.pypi.dnf     | 2 +-
 deploy/test.pypi.zypper  | 2 +-
 setup.py                 | 2 +-
 8 files changed, 11 insertions(+), 13 deletions(-)

diff --git a/.bumpversion.cfg b/.bumpversion.cfg
index b4dcb6b7..116df9ba 100644
--- a/.bumpversion.cfg
+++ b/.bumpversion.cfg
@@ -1,4 +1,4 @@
 [bumpversion]
-current_version = 0.7.68
+current_version = 0.7.69
 files = setup.py conda-recipe/meta.yaml
 
diff --git a/README.md b/README.md
index 4fda96b6..18a2f7e3 100644
--- a/README.md
+++ b/README.md
@@ -37,17 +37,17 @@ tool.
 - Ubuntu
 
     ```
-    wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/apt_limix_install | bash
+    bash <(wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/apt_limix_install)
     ```
 
 - Fedora
     ```
-    wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/dnf_limix_install | bash
+    bash <(wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/dnf_limix_install)
     ```
 
 - OpenSUSE
     ```
-    wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/zypper_limix_install | bash
+    bash <(wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/zypper_limix_install)
     ```
 
 ### From source
diff --git a/conda-recipe/meta.yaml b/conda-recipe/meta.yaml
index 8e3c7f8a..0a43cf73 100644
--- a/conda-recipe/meta.yaml
+++ b/conda-recipe/meta.yaml
@@ -1,6 +1,6 @@
 package:
     name: limix
-    version: "0.7.68"
+    version: "0.7.69"
 
 source:
     path: ../
diff --git a/deploy/apt_limix_install b/deploy/apt_limix_install
index 30f3346f..7bf3fa07 100755
--- a/deploy/apt_limix_install
+++ b/deploy/apt_limix_install
@@ -3,11 +3,9 @@
 echo "Installing Limix."
 
 sudo apt-get update
-sudo apt-get install build-essential libc6 gfortran g++ \
+sudo apt-get -y -q install build-essential libc6 gfortran g++ \
      python python-setuptools cython python-numpy python-scipy \
      python-matplotlib pkg-config libfreetype6-dev libpng12-dev \
      python-h5py liblapack-dev python-pip python-pandas swig \
-     python-sklearn-lib -y
-pip install limix
-hash -r
+     python-sklearn-lib
 pip install limix
diff --git a/deploy/test.pypi.apt b/deploy/test.pypi.apt
index 1049dee4..e9be00d6 100755
--- a/deploy/test.pypi.apt
+++ b/deploy/test.pypi.apt
@@ -2,5 +2,5 @@
 
 sudo apt-get update -y -q
 sudo apt-get install wget -y -q
-wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/apt_limix_install | bash
+bash <(wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/apt_limix_install)
 python -c "import limix; print(limix.__version__)"
diff --git a/deploy/test.pypi.dnf b/deploy/test.pypi.dnf
index e4223bda..ad7370b7 100755
--- a/deploy/test.pypi.dnf
+++ b/deploy/test.pypi.dnf
@@ -6,5 +6,5 @@ if type "sudo" > /dev/null 2>&1; then
 fi
 eval "${prefix}dnf update -y -q"
 eval "${prefix}dnf install wget -y -q"
-wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/dnf_limix_install | bash
+bash <(wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/dnf_limix_install)
 python -c "import limix; print(limix.__version__)"
diff --git a/deploy/test.pypi.zypper b/deploy/test.pypi.zypper
index 5b4bb44e..84e437d7 100755
--- a/deploy/test.pypi.zypper
+++ b/deploy/test.pypi.zypper
@@ -2,5 +2,5 @@
 
 zypper -n update
 zypper -n install wget
-wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/zypper_limix_install | bash
+bash <(wget -O - https://raw.githubusercontent.com/PMBio/limix/master/deploy/zypper_limix_install)
 python -c "import limix; print(limix.__version__)"
diff --git a/setup.py b/setup.py
index 142e50e0..57067fee 100755
--- a/setup.py
+++ b/setup.py
@@ -5,7 +5,7 @@
 import importlib
 
 PKG_NAME = 'limix'
-VERSION  = '0.7.68'
+VERSION  = '0.7.69'
 
 WORKDIR = os.path.abspath(os.path.dirname(__file__))