From 948b7d43be552ccdece7592caf3cdbc95afe0c34 Mon Sep 17 00:00:00 2001
From: Michael Franklin <michael@illusional.net>
Date: Wed, 1 Sep 2021 22:45:59 +1000
Subject: [PATCH] Fix find-replace error

---
 janisdk/fromwdl/__init__.py | 37 +++++++++++++++++++++++++++++++++++++
 1 file changed, 37 insertions(+)
 create mode 100644 janisdk/fromwdl/__init__.py

diff --git a/janisdk/fromwdl/__init__.py b/janisdk/fromwdl/__init__.py
new file mode 100644
index 00000000..68a55a3d
--- /dev/null
+++ b/janisdk/fromwdl/__init__.py
@@ -0,0 +1,37 @@
+def add_fromwdl_args(parser):
+    parser.description = (
+        "Parse a WDL command line tool / workflow and write it as a Janis file"
+    )
+
+    parser.add_argument(
+        "-o",
+        "--output",
+        help="Directory to output the workflow / tools to, otherwise this is written to stdout",
+    )
+
+    parser.add_argument("wdlfile", help="The path to the WDL file")
+
+    parser.add_argument(
+        "translation", default="janis", choices=["cwl", "wdl", "janis"], nargs="?"
+    )
+
+    return parser
+
+
+def do_fromwdl(args):
+    from janis_core import WdlParser, Logger
+
+
+    Logger.info(f"Loading WDL file: {args.wdlfile}")
+    tool = WdlParser.from_doc(args.wdlfile)
+
+    Logger.info(f"Loaded {tool.type()}: {tool.versioned_id()}")
+
+    translated = tool.translate(
+        args.translation,
+        to_console=args.output is None,
+        to_disk=args.output is not None,
+        export_path=args.output,
+    )
+
+    return translated