Remove artificial columns in gsheet.py

PavlidisLab · Oct 26, 2021 · 6d1aecc · 6d1aecc
1 parent 8d47b3d
commit 6d1aecc
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/rnaseq_pipeline/gsheet.py b/rnaseq_pipeline/gsheet.py
@@ -48,7 +48,7 @@ def retrieve_spreadsheet(spreadsheet_id, sheet_name):
     rnaseq_pipeline_queue = service.spreadsheets().values().get(spreadsheetId=spreadsheet_id, range=sheet_name).execute()
 
     # this will fail if people add new columns
-    df = pd.DataFrame(rnaseq_pipeline_queue['values'][1:], columns=rnaseq_pipeline_queue['values'][0]+list(range(2)))
+    df = pd.DataFrame(rnaseq_pipeline_queue['values'][1:], columns=rnaseq_pipeline_queue['values'][0])
 
     # type adjustment
     df['priority'] = df.priority.fillna(0).replace('', '0').astype('int')