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Add vignette and additional tests #16

Merged
merged 31 commits into from
Oct 12, 2023
Merged

Add vignette and additional tests #16

merged 31 commits into from
Oct 12, 2023

Commits on Sep 1, 2023

  1. Add vignette with lots of README stuff

    @Ulthran
    Ulthran committed Sep 1, 2023
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  2. Add sim data e2e tests

    @Ulthran
    Ulthran committed Sep 1, 2023
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  3. Fix badge

    @Ulthran
    Ulthran committed Sep 1, 2023
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Commits on Sep 21, 2023

  1. Reformat

    @Ulthran
    Ulthran committed Sep 21, 2023
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  2. Add linter and fix DESC

    @Ulthran
    Ulthran committed Sep 21, 2023
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  3. Add .lintr

    @Ulthran
    Ulthran committed Sep 21, 2023
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  4. Update .lintr

    @Ulthran
    Ulthran committed Sep 21, 2023
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  5. Allow UPPERCASE var names in linting

    @Ulthran
    Ulthran committed Sep 21, 2023
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  6. Update formatting

    @Ulthran
    Ulthran committed Sep 21, 2023
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  7. Reformat simulate_zero_inflated_beta_data

    @Ulthran
    Ulthran committed Sep 21, 2023
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  8. Fix .lintr typo

    @Ulthran
    Ulthran committed Sep 21, 2023
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Commits on Sep 22, 2023

  1. Revert "Reformat simulate_zero_inflated_beta_data" 

    This reverts commit 09f502b.
    @Ulthran
    Ulthran committed Sep 22, 2023
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  2. Add tests for sims

    @Ulthran
    Ulthran committed Sep 22, 2023
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  3. All should actually be working now

    @Ulthran
    Ulthran committed Sep 22, 2023
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  4. Increase test cov and don't fail on linter

    @Ulthran
    Ulthran committed Sep 22, 2023
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  5. Specify betareg lib

    @Ulthran
    Ulthran committed Sep 22, 2023
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  6. Lots of reformatting, mostly line length

    @Ulthran
    Ulthran committed Sep 22, 2023
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  7. Switch back to nlme for lme in vignette

    @Ulthran
    Ulthran committed Sep 22, 2023
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  8. Replace generate_gaussian_quad_points with statmod::gauss.quad

    @Ulthran
    Ulthran committed Sep 22, 2023
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  9. Fix README

    @Ulthran
    Ulthran committed Sep 22, 2023
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  10. zibr.fit to zibr_fit

    @Ulthran
    Ulthran committed Sep 22, 2023
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  11. Reformat zibr() inputs

    @Ulthran
    Ulthran committed Sep 22, 2023
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Commits on Sep 23, 2023

  1. Improvements to simulation funcs and main fit

    @Ulthran
    Ulthran committed Sep 23, 2023
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  2. Clean up fit beta and fit logistic funcs

    @Ulthran
    Ulthran committed Sep 23, 2023
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  3. Fix CMD issues

    @Ulthran
    Ulthran committed Sep 23, 2023
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Commits on Sep 25, 2023

  1. Update formatting for main function outputs

    @Ulthran
    Ulthran committed Sep 25, 2023
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Commits on Sep 26, 2023

  1. Fix vignette

    @Ulthran
    Ulthran committed Sep 26, 2023
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  2. Update fit inputs

    @Ulthran
    Ulthran committed Sep 26, 2023
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  3. Update fit outputs

    @Ulthran
    Ulthran committed Sep 26, 2023
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Commits on Oct 11, 2023

  1. Update main sim output names

    @Ulthran
    Ulthran committed Oct 11, 2023
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Commits on Oct 12, 2023

  1. Pull statmod addition to different PR

    @Ulthran
    Ulthran committed Oct 12, 2023
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