TO Numberspaces

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Laurel Cooper edited this page May 3, 2024 · 94 revisions

See each release for terms created:

In use:

TO:0000001 to TO:0001147
TO:0002600 to TO:0002768
TO:0003000 to TO:0003101- July 2023 release; weights, moisture contents, mineral contents
TO:0006001 to TO:0006069
TO:1000001 to TO:1000073 - Terms from the TermGenie tool
TO:2000000 to TO:2999999- Anne Thessen: TO terms for Planteome Knowledge graph (not integrated yet)

Pending: leaflet arrangement trait

New:

TO:0001143 antioxidant activity trait
TO:0001144 Oomycete disease response trait
TO:0001145 Ascomycete fungal disease response
TO:0001146 Basidomycete fungal disease response
TO:0001147 Fusarium solani disease response

Nov-Dec 2023 Organizing: TO:0000439 fungal disease response

Created new term for Oomycete disease response traits (TO:0001144) and moved Oomycete disease responses into it, from the fungal disease class
Changed 'resistance' to 'response' in names
Added NCBI taxon IDS to all terms that have a single causal agent
Fixed mappings on CO_330-potato-traits for late blight traits and antioxidant traits
Fixed annotations to 77 Soybase QTLs for Phythoptera- moved to TO:0001144 Oomycete disease response trait

Obsoleted the following terms as they had no def'n, no annotations, and/or were grouping classes etc

chickpea pod borer TO:0020006
chickpea botrytis grey mold response TO:0020011
chickpea fusarium wild resistance TO:0020012
chickpea colleotrichum blight response TO:0020013
chickpea ascochyta blight response TO:0020014
fungal blight disease resistance TO:0000664

New Terms for plant gall morphology:

TO:0003500 plant gall morphology