diff --git a/doc/segContexts/SegmentationCategoryTypeModifier-SlicerGeneralAnatomy.json b/doc/segContexts/SegmentationCategoryTypeModifier-SlicerGeneralAnatomy.json index 947af08b..b7e34e73 100644 --- a/doc/segContexts/SegmentationCategoryTypeModifier-SlicerGeneralAnatomy.json +++ b/doc/segContexts/SegmentationCategoryTypeModifier-SlicerGeneralAnatomy.json @@ -25,7 +25,8 @@ "UMLSConceptUID": "C0040300", "CodeValue": "T-D0050", "contextGroupName": "Abstract Segmentation Types", - "SNOMEDCTConceptID": "85756007" + "SNOMEDCTConceptID": "85756007", + "3dSlicerIntegerLabel": 1 }, { "recommendedDisplayRGBValue": [ @@ -40,7 +41,8 @@ "UMLSConceptUID": "C0555806", "CodeValue": "T-41066", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "275989006" + "SNOMEDCTConceptID": "275989006", + "3dSlicerIntegerLabel": 17 }, { "recommendedDisplayRGBValue": [ @@ -55,7 +57,8 @@ "UMLSConceptUID": "C0344335", "CodeValue": "F-03D38", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "248300009" + "SNOMEDCTConceptID": "248300009", + "3dSlicerIntegerLabel": 12 }, { "recommendedDisplayRGBValue": [ @@ -70,7 +73,8 @@ "UMLSConceptUID": "C0262950", "CodeValue": "T-D016E", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "272673000" + "SNOMEDCTConceptID": "272673000", + "3dSlicerIntegerLabel": 2 }, { "recommendedDisplayRGBValue": [ @@ -85,7 +89,8 @@ "UMLSConceptUID": "C0006901", "CodeValue": "T-40050", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "20982000" + "SNOMEDCTConceptID": "20982000", + "3dSlicerIntegerLabel": 18 }, { "recommendedDisplayRGBValue": [ @@ -100,7 +105,8 @@ "UMLSConceptUID": "C0007301", "CodeValue": "T-D021B", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "309312004" + "SNOMEDCTConceptID": "309312004", + "3dSlicerIntegerLabel": 21 }, { "recommendedDisplayRGBValue": [ @@ -115,7 +121,8 @@ "UMLSConceptUID": "C0009780", "CodeValue": "T-1A200", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "21793004" + "SNOMEDCTConceptID": "21793004", + "3dSlicerIntegerLabel": 4 }, { "recommendedDisplayRGBValue": [ @@ -130,7 +137,8 @@ "UMLSConceptUID": "C0023685", "CodeValue": "T-18010", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "52082005" + "SNOMEDCTConceptID": "52082005", + "3dSlicerIntegerLabel": 19 }, { "recommendedDisplayRGBValue": [ @@ -145,7 +153,8 @@ "UMLSConceptUID": "C0024204", "CodeValue": "T-C4000", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "59441001" + "SNOMEDCTConceptID": "59441001", + "3dSlicerIntegerLabel": 23 }, { "recommendedDisplayRGBValue": [ @@ -160,7 +169,8 @@ "UMLSConceptUID": "C0229889", "CodeValue": "T-C6010", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "83555006" + "SNOMEDCTConceptID": "83555006", + "3dSlicerIntegerLabel": 24 }, { "recommendedDisplayRGBValue": [ @@ -175,7 +185,8 @@ "UMLSConceptUID": "C0224498", "CodeValue": "T-15009", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "74135004" + "SNOMEDCTConceptID": "74135004", + "3dSlicerIntegerLabel": 22 }, { "recommendedDisplayRGBValue": [ @@ -190,7 +201,8 @@ "UMLSConceptUID": "C0026845", "CodeValue": "T-13001", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "71616004" + "SNOMEDCTConceptID": "71616004", + "3dSlicerIntegerLabel": 8 }, { "recommendedDisplayRGBValue": [ @@ -205,7 +217,8 @@ "UMLSConceptUID": "C1268169", "CodeValue": "T-D0598", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "119410002" + "SNOMEDCTConceptID": "119410002", + "3dSlicerIntegerLabel": 15 }, { "recommendedDisplayRGBValue": [ @@ -220,7 +233,8 @@ "UMLSConceptUID": "C1285092", "CodeValue": "T-1A310", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "2861001" + "SNOMEDCTConceptID": "2861001", + "3dSlicerIntegerLabel": 6 }, { "recommendedDisplayRGBValue": [ @@ -235,7 +249,8 @@ "UMLSConceptUID": "C1123023", "CodeValue": "T-01000", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "39937001" + "SNOMEDCTConceptID": "39937001", + "3dSlicerIntegerLabel": 3 }, { "recommendedDisplayRGBValue": [ @@ -250,7 +265,8 @@ "UMLSConceptUID": "C0039508", "CodeValue": "T-17010", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "13024002" + "SNOMEDCTConceptID": "13024002", + "3dSlicerIntegerLabel": 20 }, { "recommendedDisplayRGBValue": [ @@ -265,7 +281,8 @@ "UMLSConceptUID": "C0040300", "CodeValue": "T-D0050", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "85756007" + "SNOMEDCTConceptID": "85756007", + "3dSlicerIntegerLabel": 1 }, { "recommendedDisplayRGBValue": [ @@ -280,7 +297,8 @@ "UMLSConceptUID": "C0447146", "CodeValue": "T-4806E", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "181378009" + "SNOMEDCTConceptID": "181378009", + "3dSlicerIntegerLabel": 16 } ], "showAnatomy": true @@ -307,7 +325,8 @@ "UMLSConceptUID": "C0000726", "CodeMeaning": "Abdomen", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "113345001" + "SNOMEDCTConceptID": "113345001", + "3dSlicerIntegerLabel": 206 }, { "recommendedDisplayRGBValue": [ @@ -322,7 +341,8 @@ "UMLSConceptUID": "C0230168", "CodeMeaning": "Abdominal cavity", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "52731004" + "SNOMEDCTConceptID": "52731004", + "3dSlicerIntegerLabel": 205 }, { "recommendedDisplayRGBValue": [ @@ -337,7 +357,8 @@ "UMLSConceptUID": "C1279385", "CodeMeaning": "Abdominal wall muscle", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "195879000" + "SNOMEDCTConceptID": "195879000", + "3dSlicerIntegerLabel": 244 }, { "recommendedDisplayRGBValue": [ @@ -352,7 +373,8 @@ "UMLSConceptUID": "C0032008", "CodeMeaning": "Adenohypophysis", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "62818001" + "SNOMEDCTConceptID": "62818001", + "3dSlicerIntegerLabel": 120 }, { "contextGroupName": "Abdominal Organ Segmentation Types", @@ -375,7 +397,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 228 }, { "recommendedDisplayRGBValue": [ @@ -390,10 +413,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 229 } ], - "SNOMEDCTConceptID": "23451007" + "SNOMEDCTConceptID": "23451007", + "3dSlicerIntegerLabel": 120 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -416,7 +441,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 62 }, { "recommendedDisplayRGBValue": [ @@ -431,10 +457,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 63 } ], - "SNOMEDCTConceptID": "4958002" + "SNOMEDCTConceptID": "4958002", + "3dSlicerIntegerLabel": 229 }, { "recommendedDisplayRGBValue": [ @@ -449,7 +477,8 @@ "UMLSConceptUID": "C0003461", "CodeMeaning": "Anus", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "53505006" + "SNOMEDCTConceptID": "53505006", + "3dSlicerIntegerLabel": 215 }, { "recommendedDisplayRGBValue": [ @@ -464,7 +493,8 @@ "UMLSConceptUID": "C0003483", "CodeMeaning": "Aorta", "contextGroupName": "Cardiac Structure Segmentation Types", - "SNOMEDCTConceptID": "15825003" + "SNOMEDCTConceptID": "15825003", + "3dSlicerIntegerLabel": 191 }, { "recommendedDisplayRGBValue": [ @@ -479,7 +509,8 @@ "UMLSConceptUID": "C0003501", "CodeMeaning": "Aortic Valve", "contextGroupName": "Mediastinum Anatomy Finding or Feature", - "SNOMEDCTConceptID": "34202007" + "SNOMEDCTConceptID": "34202007", + "3dSlicerIntegerLabel": 189 }, { "recommendedDisplayRGBValue": [ @@ -494,7 +525,8 @@ "UMLSConceptUID": "C0003707", "CodeMeaning": "Arachnoid", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "75042008" + "SNOMEDCTConceptID": "75042008", + "3dSlicerIntegerLabel": 124 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -517,7 +549,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 78 }, { "recommendedDisplayRGBValue": [ @@ -532,10 +565,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 79 } ], - "SNOMEDCTConceptID": "" + "SNOMEDCTConceptID": "", + "3dSlicerIntegerLabel": 124 }, { "recommendedDisplayRGBValue": [ @@ -550,7 +585,8 @@ "UMLSConceptUID": "C0206250", "CodeMeaning": "Autonomic nerve", "contextGroupName": "Peripheral Nervous System Segmentation Types", - "SNOMEDCTConceptID": "53520000" + "SNOMEDCTConceptID": "53520000", + "3dSlicerIntegerLabel": 280 }, { "recommendedDisplayRGBValue": [ @@ -565,7 +601,8 @@ "UMLSConceptUID": "C0005400", "CodeMeaning": "Bile Duct", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "28273000" + "SNOMEDCTConceptID": "28273000", + "3dSlicerIntegerLabel": 217 }, { "recommendedDisplayRGBValue": [ @@ -580,7 +617,8 @@ "UMLSConceptUID": "C0005682", "CodeMeaning": "Bladder", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "89837001" + "SNOMEDCTConceptID": "89837001", + "3dSlicerIntegerLabel": 226 }, { "recommendedDisplayRGBValue": [ @@ -595,7 +633,8 @@ "UMLSConceptUID": "C0448157", "CodeMeaning": "Bone of thorax", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "272710004" + "SNOMEDCTConceptID": "272710004", + "3dSlicerIntegerLabel": 199 }, { "recommendedDisplayRGBValue": [ @@ -610,7 +649,8 @@ "UMLSConceptUID": "C0730130", "CodeMeaning": "Bone structure of head and/or neck", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "312779009" + "SNOMEDCTConceptID": "312779009", + "3dSlicerIntegerLabel": 166 }, { "recommendedDisplayRGBValue": [ @@ -625,7 +665,8 @@ "UMLSConceptUID": "C0006104", "CodeMeaning": "Brain", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "12738006" + "SNOMEDCTConceptID": "12738006", + "3dSlicerIntegerLabel": 38 }, { "recommendedDisplayRGBValue": [ @@ -640,7 +681,8 @@ "UMLSConceptUID": "C0459387", "CodeMeaning": "Brain cerebrospinal fluid pathway", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "280371009" + "SNOMEDCTConceptID": "280371009", + "3dSlicerIntegerLabel": 106 }, { "recommendedDisplayRGBValue": [ @@ -655,7 +697,8 @@ "UMLSConceptUID": "C0007799", "CodeMeaning": "Brain ventricle", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "35764002" + "SNOMEDCTConceptID": "35764002", + "3dSlicerIntegerLabel": 107 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -678,7 +721,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 56 }, { "recommendedDisplayRGBValue": [ @@ -693,10 +737,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 57 } ], - "SNOMEDCTConceptID": "11000004" + "SNOMEDCTConceptID": "11000004", + "3dSlicerIntegerLabel": 107 }, { "recommendedDisplayRGBValue": [ @@ -711,7 +757,8 @@ "UMLSConceptUID": "C0927232", "CodeMeaning": "Central nervous system", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "21483005" + "SNOMEDCTConceptID": "21483005", + "3dSlicerIntegerLabel": 37 }, { "recommendedDisplayRGBValue": [ @@ -726,7 +773,8 @@ "UMLSConceptUID": "C0152381", "CodeMeaning": "Cerebellar white matter", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "33060004" + "SNOMEDCTConceptID": "33060004", + "3dSlicerIntegerLabel": 105 }, { "recommendedDisplayRGBValue": [ @@ -741,7 +789,8 @@ "UMLSConceptUID": "C0007769", "CodeMeaning": "Cerebral aqueduct", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "80447000" + "SNOMEDCTConceptID": "80447000", + "3dSlicerIntegerLabel": 112 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -764,7 +813,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 100 }, { "recommendedDisplayRGBValue": [ @@ -779,10 +829,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 101 } ], - "SNOMEDCTConceptID": "87463005" + "SNOMEDCTConceptID": "87463005", + "3dSlicerIntegerLabel": 112 }, { "recommendedDisplayRGBValue": [ @@ -797,7 +849,8 @@ "UMLSConceptUID": "C0007776", "CodeMeaning": "Cerebral Grey Matter", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "40146001" + "SNOMEDCTConceptID": "40146001", + "3dSlicerIntegerLabel": 41 }, { "recommendedDisplayRGBValue": [ @@ -812,7 +865,168 @@ "UMLSConceptUID": "C0152295", "CodeMeaning": "Cerebral White Matter", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "68523003" + "SNOMEDCTConceptID": "68523003", + "3dSlicerIntegerLabel": 73 + }, + { + "recommendedDisplayRGBValue": [ + 200, + 200, + 235 + ], + "CodeMeaning": "Gray Matter", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "gray matter", + "3dSlicerIntegerLabel": 13, + "cid": "7153", + "UMLSConceptUID": "C1300312", + "CodeValue": "T-A0096", + "contextGroupName": "CNSSegmentationTypes", + "SNOMEDCTConceptID": "389081007" + }, + { + "recommendedDisplayRGBValue": [ + 250, + 250, + 210 + ], + "CodeMeaning": "White Matter", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "white matter", + "3dSlicerIntegerLabel": 14, + "cid": "7153", + "UMLSConceptUID": "C1300311", + "CodeValue": "T-A0095", + "contextGroupName": "CNSSegmentationTypes", + "SNOMEDCTConceptID": "389080008" + }, + { + "recommendedDisplayRGBValue": [ + 221, + 130, + 101 + ], + "CodeMeaning": "Liver", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "liver", + "3dSlicerIntegerLabel": 216, + "cid": "4030,7154", + "UMLSConceptUID": "C0023884", + "CodeValue": "T-62000", + "contextGroupName": "CT,MRandPETAnatomyImaged,AbdominalSegmentationTypes", + "SNOMEDCTConceptID": "10200004" + }, + { + "recommendedDisplayRGBValue": [ + 196, + 172, + 68 + ], + "CodeMeaning": "Maxilla", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "maxilla", + "3dSlicerIntegerLabel": 152, + "cid": "4028,4031", + "UMLSConceptUID": "C0024947", + "CodeValue": "T-11170", + "contextGroupName": "CraniofacialAnatomicRegions,CommonAnatomicRegions", + "SNOMEDCTConceptID": "70925003" + }, + { + "recommendedDisplayRGBValue": [ + 145, + 92, + 109 + ], + "CodeMeaning": "Midbrain", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "midbrain", + "3dSlicerIntegerLabel": 69, + "cid": "7153", + "UMLSConceptUID": "C0025462", + "CodeValue": "T-A5100", + "contextGroupName": "CNSSegmentationTypes", + "SNOMEDCTConceptID": "61962009" + }, + { + "recommendedDisplayRGBValue": [ + 255, + 245, + 217 + ], + "CodeMeaning": "Pleura", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "pleura", + "3dSlicerIntegerLabel": 179, + "cid": "7155", + "UMLSConceptUID": "C0032225", + "CodeValue": "T-29000", + "contextGroupName": "ThoracicSegmentationTypes", + "SNOMEDCTConceptID": "3120008" + }, + { + "recommendedDisplayRGBValue": [ + 253, + 232, + 158 + ], + "CodeMeaning": "Rib", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "ribs", + "3dSlicerIntegerLabel": 201, + "cid": "4031,6114,7155", + "UMLSConceptUID": "C0035561", + "CodeValue": "T-11300", + "contextGroupName": "CommonAnatomicRegions,OsseousAnatomyFindingorFeature,ThoracicSegmentationTypes", + "SNOMEDCTConceptID": "113197003" + }, + { + "recommendedDisplayRGBValue": [ + 157, + 108, + 162 + ], + "CodeMeaning": "Spleen", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "spleen", + "3dSlicerIntegerLabel": 220, + "cid": "4030,7154", + "UMLSConceptUID": "C0037993", + "CodeValue": "T-C3000", + "contextGroupName": "CT,MRandPETAnatomyImaged,AbdominalSegmentationTypes", + "SNOMEDCTConceptID": "78961009" + }, + { + "recommendedDisplayRGBValue": [ + 68, + 131, + 98 + ], + "CodeMeaning": "Telencephalon", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "telencephalon", + "3dSlicerIntegerLabel": 40, + "cid": "7153", + "UMLSConceptUID": "C0039452", + "CodeValue": "T-A0103", + "contextGroupName": "CNSSegmentationTypes", + "SNOMEDCTConceptID": "11628009" + }, + { + "recommendedDisplayRGBValue": [ + 240, + 210, + 35 + ], + "CodeMeaning": "Vagus nerve", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "vagus nerve", + "3dSlicerIntegerLabel": 283, + "cid": "7167", + "UMLSConceptUID": "C0042276", + "CodeValue": "T-A8640", + "contextGroupName": "PeripheralNervousSystemSegmentationTypes", + "SNOMEDCTConceptID": "88882009" }, { "recommendedDisplayRGBValue": [ @@ -827,7 +1041,8 @@ "UMLSConceptUID": "C0728985", "CodeMeaning": "Cervical spine", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "122494005" + "SNOMEDCTConceptID": "122494005", + "3dSlicerIntegerLabel": 168 }, { "recommendedDisplayRGBValue": [ @@ -842,7 +1057,8 @@ "UMLSConceptUID": "C0817096", "CodeMeaning": "Chest", "contextGroupName": "Endoscopy Anatomic Regions", - "SNOMEDCTConceptID": "51185008" + "SNOMEDCTConceptID": "51185008", + "3dSlicerIntegerLabel": 169 }, { "recommendedDisplayRGBValue": [ @@ -857,7 +1073,8 @@ "UMLSConceptUID": "C1269825", "CodeMeaning": "Chest wall muscle", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "372074006" + "SNOMEDCTConceptID": "372074006", + "3dSlicerIntegerLabel": 198 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -880,7 +1097,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 82 }, { "recommendedDisplayRGBValue": [ @@ -895,10 +1113,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 83 } ], - "SNOMEDCTConceptID": "37035000" + "SNOMEDCTConceptID": "37035000", + "3dSlicerIntegerLabel": 198 }, { "contextGroupName": "Thoracic Tissue Segmentation Types", @@ -921,7 +1141,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 203 }, { "recommendedDisplayRGBValue": [ @@ -936,10 +1157,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 204 } ], - "SNOMEDCTConceptID": "51299004" + "SNOMEDCTConceptID": "51299004", + "3dSlicerIntegerLabel": 83 }, { "recommendedDisplayRGBValue": [ @@ -954,7 +1177,8 @@ "UMLSConceptUID": "C0009368", "CodeMeaning": "Colon", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "71854001" + "SNOMEDCTConceptID": "71854001", + "3dSlicerIntegerLabel": 214 }, { "recommendedDisplayRGBValue": [ @@ -969,7 +1193,8 @@ "UMLSConceptUID": "C0010090", "CodeMeaning": "Corpus callosum", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "88442005" + "SNOMEDCTConceptID": "88442005", + "3dSlicerIntegerLabel": 103 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -992,7 +1217,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 54 }, { "recommendedDisplayRGBValue": [ @@ -1007,10 +1233,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 55 } ], - "SNOMEDCTConceptID": "31428008" + "SNOMEDCTConceptID": "31428008", + "3dSlicerIntegerLabel": 103 }, { "recommendedDisplayRGBValue": [ @@ -1025,33 +1253,24 @@ "UMLSConceptUID": "C0010268", "CodeMeaning": "Cranial nerve", "contextGroupName": "Peripheral Nervous System Segmentation Types", - "SNOMEDCTConceptID": "25238003" + "SNOMEDCTConceptID": "25238003", + "3dSlicerIntegerLabel": 282 }, { "contextGroupName": "CNS Tissue Segmentation Types", "cid": "7153", "CodeMeaning": "Diencephalon", + "3dSlicerLabel": "diencephalon", "CodingSchemeDesignator": "SRT", "UMLSConceptUID": "C0012144", "CodeValue": "T-A0102", - "Modifier": [ - { - "recommendedDisplayRGBValue": [ - 69, - 110, - 53 - ], - "cid": "244", - "CodingSchemeDesignator": "SRT", - "3dSlicerLabel": "diencephalon", - "CodeValue": "G-A100", - "UMLSConceptUID": "C0205090", - "CodeMeaning": "Right", - "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" - } + "recommendedDisplayRGBValue": [ + 69, + 110, + 53 ], - "SNOMEDCTConceptID": "87563008" + "SNOMEDCTConceptID": "87563008", + "3dSlicerIntegerLabel": 64 }, { "recommendedDisplayRGBValue": [ @@ -1066,7 +1285,8 @@ "UMLSConceptUID": "C0013303", "CodeMeaning": "Duodenum", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "38848004" + "SNOMEDCTConceptID": "38848004", + "3dSlicerIntegerLabel": 212 }, { "recommendedDisplayRGBValue": [ @@ -1081,7 +1301,8 @@ "UMLSConceptUID": "C0013313", "CodeMeaning": "Dura mater", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "18545000" + "SNOMEDCTConceptID": "18545000", + "3dSlicerIntegerLabel": 123 }, { "recommendedDisplayRGBValue": [ @@ -1096,7 +1317,8 @@ "UMLSConceptUID": "C0014876", "CodeMeaning": "Esophagus", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "32849002" + "SNOMEDCTConceptID": "32849002", + "3dSlicerIntegerLabel": 194 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -1119,7 +1341,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 134 }, { "recommendedDisplayRGBValue": [ @@ -1134,10 +1357,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 135 } ], - "SNOMEDCTConceptID": "28347008" + "SNOMEDCTConceptID": "28347008", + "3dSlicerIntegerLabel": 194 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -1160,7 +1385,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 138 }, { "recommendedDisplayRGBValue": [ @@ -1175,10 +1401,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 139 } ], - "SNOMEDCTConceptID": "79652003" + "SNOMEDCTConceptID": "79652003", + "3dSlicerIntegerLabel": 135 }, { "recommendedDisplayRGBValue": [ @@ -1193,7 +1421,8 @@ "UMLSConceptUID": "C0227747", "CodeMeaning": "Female external genitalia", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "86969008" + "SNOMEDCTConceptID": "86969008", + "3dSlicerIntegerLabel": 247 }, { "recommendedDisplayRGBValue": [ @@ -1208,7 +1437,8 @@ "UMLSConceptUID": "C0227748", "CodeMeaning": "Female internal genitalia", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "87759004" + "SNOMEDCTConceptID": "87759004", + "3dSlicerIntegerLabel": 230 }, { "contextGroupName": "Common Anatomic Regions", @@ -1231,7 +1461,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 277 }, { "recommendedDisplayRGBValue": [ @@ -1246,10 +1477,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 278 } ], - "SNOMEDCTConceptID": "56459004" + "SNOMEDCTConceptID": "56459004", + "3dSlicerIntegerLabel": 230 }, { "contextGroupName": "Common Anatomic Regions", @@ -1272,7 +1505,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 259 }, { "recommendedDisplayRGBValue": [ @@ -1287,10 +1521,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 260 } ], - "SNOMEDCTConceptID": "14975008" + "SNOMEDCTConceptID": "14975008", + "3dSlicerIntegerLabel": 278 }, { "recommendedDisplayRGBValue": [ @@ -1305,7 +1541,8 @@ "UMLSConceptUID": "C0149556", "CodeMeaning": "Fourth ventricle", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "35918002" + "SNOMEDCTConceptID": "35918002", + "3dSlicerIntegerLabel": 113 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -1328,7 +1565,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 141 }, { "recommendedDisplayRGBValue": [ @@ -1343,10 +1581,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 142 } ], - "SNOMEDCTConceptID": "74872008" + "SNOMEDCTConceptID": "74872008", + "3dSlicerIntegerLabel": 113 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1369,7 +1609,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 42 }, { "recommendedDisplayRGBValue": [ @@ -1384,10 +1625,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 43 } ], - "SNOMEDCTConceptID": "83251001" + "SNOMEDCTConceptID": "83251001", + "3dSlicerIntegerLabel": 142 }, { "recommendedDisplayRGBValue": [ @@ -1402,7 +1645,8 @@ "UMLSConceptUID": "C0016976", "CodeMeaning": "Gallbladder", "contextGroupName": "Endoscopy Anatomic Regions", - "SNOMEDCTConceptID": "28231008" + "SNOMEDCTConceptID": "28231008", + "3dSlicerIntegerLabel": 218 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1425,7 +1669,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 60 }, { "recommendedDisplayRGBValue": [ @@ -1440,10 +1685,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 61 } ], - "SNOMEDCTConceptID": "14738005" + "SNOMEDCTConceptID": "14738005", + "3dSlicerIntegerLabel": 218 }, { "contextGroupName": "Common Anatomic Regions", @@ -1466,7 +1713,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 263 }, { "recommendedDisplayRGBValue": [ @@ -1481,10 +1729,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 264 } ], - "SNOMEDCTConceptID": "85562004" + "SNOMEDCTConceptID": "85562004", + "3dSlicerIntegerLabel": 61 }, { "recommendedDisplayRGBValue": [ @@ -1499,7 +1749,8 @@ "UMLSConceptUID": "C0018670", "CodeMeaning": "Head", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "69536005" + "SNOMEDCTConceptID": "69536005", + "3dSlicerIntegerLabel": 36 }, { "recommendedDisplayRGBValue": [ @@ -1514,7 +1765,8 @@ "UMLSConceptUID": "C0018787", "CodeMeaning": "Heart", "contextGroupName": "Cardiac Structure Segmentation Types", - "SNOMEDCTConceptID": "80891009" + "SNOMEDCTConceptID": "80891009", + "3dSlicerIntegerLabel": 180 }, { "recommendedDisplayRGBValue": [ @@ -1529,7 +1781,8 @@ "UMLSConceptUID": "C0020417", "CodeMeaning": "Hyoid bone", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "21387005" + "SNOMEDCTConceptID": "21387005", + "3dSlicerIntegerLabel": 167 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1552,7 +1805,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 95 }, { "recommendedDisplayRGBValue": [ @@ -1567,10 +1821,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 96 } ], - "SNOMEDCTConceptID": "67701001" + "SNOMEDCTConceptID": "67701001", + "3dSlicerIntegerLabel": 167 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1593,7 +1849,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 76 }, { "recommendedDisplayRGBValue": [ @@ -1608,10 +1865,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 77 } ], - "SNOMEDCTConceptID": "55233005" + "SNOMEDCTConceptID": "55233005", + "3dSlicerIntegerLabel": 96 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -1634,7 +1893,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 132 }, { "recommendedDisplayRGBValue": [ @@ -1649,10 +1909,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 133 } ], - "SNOMEDCTConceptID": "22945000" + "SNOMEDCTConceptID": "22945000", + "3dSlicerIntegerLabel": 77 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1675,7 +1937,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 50 }, { "recommendedDisplayRGBValue": [ @@ -1690,10 +1953,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 51 } ], - "SNOMEDCTConceptID": "36169008" + "SNOMEDCTConceptID": "36169008", + "3dSlicerIntegerLabel": 133 }, { "recommendedDisplayRGBValue": [ @@ -1708,7 +1973,8 @@ "UMLSConceptUID": "C0225836", "CodeMeaning": "Interatrial septum", "contextGroupName": "Muscular Anatomy", - "SNOMEDCTConceptID": "58095006" + "SNOMEDCTConceptID": "58095006", + "3dSlicerIntegerLabel": 183 }, { "recommendedDisplayRGBValue": [ @@ -1723,7 +1989,8 @@ "UMLSConceptUID": "C0225870", "CodeMeaning": "Interventricular septum", "contextGroupName": "Muscular Anatomy", - "SNOMEDCTConceptID": "589001" + "SNOMEDCTConceptID": "589001", + "3dSlicerIntegerLabel": 184 }, { "contextGroupName": "Abdominal Organ Segmentation Types", @@ -1746,7 +2013,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 222 }, { "recommendedDisplayRGBValue": [ @@ -1761,10 +2029,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 223 } ], - "SNOMEDCTConceptID": "64033007" + "SNOMEDCTConceptID": "64033007", + "3dSlicerIntegerLabel": 184 }, { "contextGroupName": "Endoscopy Anatomic Regions", @@ -1787,7 +2057,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 273 }, { "recommendedDisplayRGBValue": [ @@ -1802,10 +2073,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 274 } ], - "SNOMEDCTConceptID": "72696002" + "SNOMEDCTConceptID": "72696002", + "3dSlicerIntegerLabel": 223 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -1828,10 +2101,12 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 154 } ], - "SNOMEDCTConceptID": "6229007" + "SNOMEDCTConceptID": "6229007", + "3dSlicerIntegerLabel": 274 }, { "recommendedDisplayRGBValue": [ @@ -1846,7 +2121,8 @@ "UMLSConceptUID": "C0023078", "CodeMeaning": "Larynx", "contextGroupName": "Endoscopy Anatomic Regions", - "SNOMEDCTConceptID": "4596009" + "SNOMEDCTConceptID": "4596009", + "3dSlicerIntegerLabel": 162 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1869,7 +2145,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 85 }, { "recommendedDisplayRGBValue": [ @@ -1884,10 +2161,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 86 } ], - "SNOMEDCTConceptID": "461002" + "SNOMEDCTConceptID": "461002", + "3dSlicerIntegerLabel": 162 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1910,7 +2189,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 108 }, { "recommendedDisplayRGBValue": [ @@ -1925,10 +2205,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 109 } ], - "SNOMEDCTConceptID": "66720007" + "SNOMEDCTConceptID": "66720007", + "3dSlicerIntegerLabel": 86 }, { "recommendedDisplayRGBValue": [ @@ -1943,7 +2225,8 @@ "UMLSConceptUID": "C0225897", "CodeMeaning": "Left Ventricle", "contextGroupName": "Cardiac Structure Segmentation Types", - "SNOMEDCTConceptID": "87878005" + "SNOMEDCTConceptID": "87878005", + "3dSlicerIntegerLabel": 186 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -1966,7 +2249,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 52 }, { "recommendedDisplayRGBValue": [ @@ -1981,10 +2265,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 53 } ], - "SNOMEDCTConceptID": "279215006" + "SNOMEDCTConceptID": "279215006", + "3dSlicerIntegerLabel": 186 }, { "recommendedDisplayRGBValue": [ @@ -1999,7 +2285,8 @@ "UMLSConceptUID": "C0023759", "CodeMeaning": "Lip", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "48477009" + "SNOMEDCTConceptID": "48477009", + "3dSlicerIntegerLabel": 128 }, { "contextGroupName": "Common Anatomic Regions", @@ -2022,7 +2309,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 275 }, { "recommendedDisplayRGBValue": [ @@ -2037,10 +2325,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 276 } ], - "SNOMEDCTConceptID": "30021000" + "SNOMEDCTConceptID": "30021000", + "3dSlicerIntegerLabel": 128 }, { "contextGroupName": "Common Anatomic Regions", @@ -2063,7 +2353,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 267 }, { "recommendedDisplayRGBValue": [ @@ -2078,10 +2369,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 268 } ], - "SNOMEDCTConceptID": "61685007" + "SNOMEDCTConceptID": "61685007", + "3dSlicerIntegerLabel": 276 }, { "contextGroupName": "Thoracic Tissue Segmentation Types", @@ -2104,7 +2397,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 177 }, { "recommendedDisplayRGBValue": [ @@ -2119,10 +2413,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 178 } ], - "SNOMEDCTConceptID": "90572001" + "SNOMEDCTConceptID": "90572001", + "3dSlicerIntegerLabel": 268 }, { "recommendedDisplayRGBValue": [ @@ -2137,7 +2433,8 @@ "UMLSConceptUID": "C0024091", "CodeMeaning": "Lumbar spine", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "122496007" + "SNOMEDCTConceptID": "122496007", + "3dSlicerIntegerLabel": 246 }, { "contextGroupName": "Thoracic Tissue Segmentation Types", @@ -2160,7 +2457,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 172 }, { "recommendedDisplayRGBValue": [ @@ -2175,10 +2473,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 173 } ], - "SNOMEDCTConceptID": "39607008" + "SNOMEDCTConceptID": "39607008", + "3dSlicerIntegerLabel": 246 }, { "recommendedDisplayRGBValue": [ @@ -2193,7 +2493,8 @@ "UMLSConceptUID": "C0227922", "CodeMeaning": "Male external genitalia", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "90418005" + "SNOMEDCTConceptID": "90418005", + "3dSlicerIntegerLabel": 248 }, { "recommendedDisplayRGBValue": [ @@ -2208,7 +2509,8 @@ "UMLSConceptUID": "C0227923", "CodeMeaning": "Male internal genitalia", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "38242008" + "SNOMEDCTConceptID": "38242008", + "3dSlicerIntegerLabel": 237 }, { "recommendedDisplayRGBValue": [ @@ -2223,7 +2525,8 @@ "UMLSConceptUID": "C0024687", "CodeMeaning": "Mandible", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "91609006" + "SNOMEDCTConceptID": "91609006", + "3dSlicerIntegerLabel": 158 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -2246,7 +2549,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 89 }, { "recommendedDisplayRGBValue": [ @@ -2261,10 +2565,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 90 } ], - "SNOMEDCTConceptID": "30114003" + "SNOMEDCTConceptID": "30114003", + "3dSlicerIntegerLabel": 158 }, { "recommendedDisplayRGBValue": [ @@ -2279,7 +2585,8 @@ "UMLSConceptUID": "C0025066", "CodeMeaning": "Mediastinum", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "72410000" + "SNOMEDCTConceptID": "72410000", + "3dSlicerIntegerLabel": 196 }, { "recommendedDisplayRGBValue": [ @@ -2294,7 +2601,8 @@ "UMLSConceptUID": "C0025285", "CodeMeaning": "Meninges", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "1231004" + "SNOMEDCTConceptID": "1231004", + "3dSlicerIntegerLabel": 122 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -2317,7 +2625,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 93 }, { "recommendedDisplayRGBValue": [ @@ -2332,10 +2641,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 94 } ], - "SNOMEDCTConceptID": "33723005" + "SNOMEDCTConceptID": "33723005", + "3dSlicerIntegerLabel": 122 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -2358,7 +2669,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 136 }, { "recommendedDisplayRGBValue": [ @@ -2373,10 +2685,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 137 } ], - "SNOMEDCTConceptID": "25342003" + "SNOMEDCTConceptID": "25342003", + "3dSlicerIntegerLabel": 94 }, { "recommendedDisplayRGBValue": [ @@ -2391,7 +2705,8 @@ "UMLSConceptUID": "C0225757", "CodeMeaning": "Middle lobe of right lung", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "72481006" + "SNOMEDCTConceptID": "72481006", + "3dSlicerIntegerLabel": 176 }, { "recommendedDisplayRGBValue": [ @@ -2406,7 +2721,8 @@ "UMLSConceptUID": "C0026264", "CodeMeaning": "Mitral Valve", "contextGroupName": "Mediastinum Anatomy Finding or Feature", - "SNOMEDCTConceptID": "91134007" + "SNOMEDCTConceptID": "91134007", + "3dSlicerIntegerLabel": 187 }, { "recommendedDisplayRGBValue": [ @@ -2421,7 +2737,8 @@ "UMLSConceptUID": "C0224097", "CodeMeaning": "Muscle of head", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "22688005" + "SNOMEDCTConceptID": "22688005", + "3dSlicerIntegerLabel": 126 }, { "recommendedDisplayRGBValue": [ @@ -2436,7 +2753,8 @@ "UMLSConceptUID": "C0027532", "CodeMeaning": "Muscle of neck", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "81727001" + "SNOMEDCTConceptID": "81727001", + "3dSlicerIntegerLabel": 160 }, { "recommendedDisplayRGBValue": [ @@ -2451,7 +2769,8 @@ "UMLSConceptUID": "C0027530", "CodeMeaning": "Neck", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "45048000" + "SNOMEDCTConceptID": "45048000", + "3dSlicerIntegerLabel": 159 }, { "recommendedDisplayRGBValue": [ @@ -2466,7 +2785,8 @@ "UMLSConceptUID": "C0032009", "CodeMeaning": "Neurohypophysis", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "37512009" + "SNOMEDCTConceptID": "37512009", + "3dSlicerIntegerLabel": 121 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -2489,7 +2809,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 48 }, { "recommendedDisplayRGBValue": [ @@ -2504,10 +2825,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 49 } ], - "SNOMEDCTConceptID": "31065004" + "SNOMEDCTConceptID": "31065004", + "3dSlicerIntegerLabel": 121 }, { "recommendedDisplayRGBValue": [ @@ -2522,7 +2845,8 @@ "UMLSConceptUID": "C0028977", "CodeMeaning": "Omentum", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "27398004" + "SNOMEDCTConceptID": "27398004", + "3dSlicerIntegerLabel": 208 }, { "recommendedDisplayRGBValue": [ @@ -2537,7 +2861,8 @@ "UMLSConceptUID": "C0029126", "CodeMeaning": "Optic chiasm", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "244453006" + "SNOMEDCTConceptID": "244453006", + "3dSlicerIntegerLabel": 97 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -2560,7 +2885,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 87 }, { "recommendedDisplayRGBValue": [ @@ -2575,10 +2901,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 88 } ], - "SNOMEDCTConceptID": "70105001" + "SNOMEDCTConceptID": "70105001", + "3dSlicerIntegerLabel": 97 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -2601,7 +2929,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 98 }, { "recommendedDisplayRGBValue": [ @@ -2616,10 +2945,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 99 } ], - "SNOMEDCTConceptID": "53238003" + "SNOMEDCTConceptID": "53238003", + "3dSlicerIntegerLabel": 88 }, { "contextGroupName": "Pelvic Organ Segmentation Types", @@ -2642,7 +2973,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 234 }, { "recommendedDisplayRGBValue": [ @@ -2657,10 +2989,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 235 } ], - "SNOMEDCTConceptID": "15497006" + "SNOMEDCTConceptID": "15497006", + "3dSlicerIntegerLabel": 99 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -2683,7 +3017,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 156 }, { "recommendedDisplayRGBValue": [ @@ -2698,10 +3033,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 157 } ], - "SNOMEDCTConceptID": "51283005" + "SNOMEDCTConceptID": "51283005", + "3dSlicerIntegerLabel": 235 }, { "recommendedDisplayRGBValue": [ @@ -2716,7 +3053,8 @@ "UMLSConceptUID": "C0030274", "CodeMeaning": "Pancreas", "contextGroupName": "CT, MR and PET Anatomy Imaged", - "SNOMEDCTConceptID": "15776009" + "SNOMEDCTConceptID": "15776009", + "3dSlicerIntegerLabel": 219 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -2739,7 +3077,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 143 }, { "recommendedDisplayRGBValue": [ @@ -2754,10 +3093,42 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 144 } ], - "SNOMEDCTConceptID": "24924006" + "SNOMEDCTConceptID": "24924006", + "3dSlicerIntegerLabel": 219 + }, + { + "contextGroupName": "Craniofacial Anatomic Regions", + "cid": "4028", + "CodeMeaning": "Occipital bone", + "CodingSchemeDesignator": "SRT", + "UMLSConceptUID": "C0028784", + "CodeValue": "T-11140", + "3dSlicerLabel": "occipital bone", + "recommendedDisplayRGBValue": [ + 255, + 230, + 138 + ], + "3dSlicerIntegerLabel": 151 + }, + { + "recommendedDisplayRGBValue": [ + 255, + 237, + 145 + ], + "cid": "4028", + "CodingSchemeDesignator": "SRT", + "3dSlicerLabel": "vomer bone", + "CodeValue": "T-21342", + "UMLSConceptUID": "C0242403", + "CodeMeaning": "Vomer bone", + "contextGroupName": "Craniofacial Anatomic Regions", + "3dSlicerIntegerLabel": 155 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -2780,7 +3151,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 46 }, { "recommendedDisplayRGBValue": [ @@ -2795,10 +3167,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 47 } ], - "SNOMEDCTConceptID": "16630005" + "SNOMEDCTConceptID": "16630005", + "3dSlicerIntegerLabel": 155 }, { "recommendedDisplayRGBValue": [ @@ -2813,7 +3187,8 @@ "UMLSConceptUID": "C0225972", "CodeMeaning": "Pericardial cavity", "contextGroupName": "Cardiac Structure Segmentation Types", - "SNOMEDCTConceptID": "25489000" + "SNOMEDCTConceptID": "25489000", + "3dSlicerIntegerLabel": 193 }, { "recommendedDisplayRGBValue": [ @@ -2828,7 +3203,8 @@ "UMLSConceptUID": "C0031050", "CodeMeaning": "Pericardium", "contextGroupName": "Cardiac Structure Segmentation Types", - "SNOMEDCTConceptID": "76848001" + "SNOMEDCTConceptID": "76848001", + "3dSlicerIntegerLabel": 192 }, { "recommendedDisplayRGBValue": [ @@ -2843,7 +3219,8 @@ "UMLSConceptUID": "C0031119", "CodeMeaning": "Peripheral nerve", "contextGroupName": "Peripheral Nervous System Segmentation Types", - "SNOMEDCTConceptID": "84782009" + "SNOMEDCTConceptID": "84782009", + "3dSlicerIntegerLabel": 284 }, { "recommendedDisplayRGBValue": [ @@ -2858,7 +3235,8 @@ "UMLSConceptUID": "C0206417", "CodeMeaning": "Peripheral nervous system", "contextGroupName": "Peripheral Nervous System Segmentation Types", - "SNOMEDCTConceptID": "3058005" + "SNOMEDCTConceptID": "3058005", + "3dSlicerIntegerLabel": 279 }, { "recommendedDisplayRGBValue": [ @@ -2873,7 +3251,8 @@ "UMLSConceptUID": "C0031153", "CodeMeaning": "Peritioneum", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "15425007" + "SNOMEDCTConceptID": "15425007", + "3dSlicerIntegerLabel": 207 }, { "recommendedDisplayRGBValue": [ @@ -2888,7 +3267,8 @@ "UMLSConceptUID": "C1704247", "CodeMeaning": "Peritoneal cavity", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "83670000" + "SNOMEDCTConceptID": "83670000", + "3dSlicerIntegerLabel": 209 }, { "recommendedDisplayRGBValue": [ @@ -2903,7 +3283,8 @@ "UMLSConceptUID": "C0031354", "CodeMeaning": "Pharynx", "contextGroupName": "Endoscopy Anatomic Regions", - "SNOMEDCTConceptID": "54066008" + "SNOMEDCTConceptID": "54066008", + "3dSlicerIntegerLabel": 161 }, { "recommendedDisplayRGBValue": [ @@ -2918,7 +3299,8 @@ "UMLSConceptUID": "C0031869", "CodeMeaning": "Pia mater", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "23180006" + "SNOMEDCTConceptID": "23180006", + "3dSlicerIntegerLabel": 125 }, { "recommendedDisplayRGBValue": [ @@ -2933,7 +3315,8 @@ "UMLSConceptUID": "C0031939", "CodeMeaning": "Pineal Gland", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "45793000" + "SNOMEDCTConceptID": "45793000", + "3dSlicerIntegerLabel": 68 }, { "recommendedDisplayRGBValue": [ @@ -2948,7 +3331,8 @@ "UMLSConceptUID": "C0032005", "CodeMeaning": "Pituitary", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "56329008" + "SNOMEDCTConceptID": "56329008", + "3dSlicerIntegerLabel": 119 }, { "recommendedDisplayRGBValue": [ @@ -2963,7 +3347,8 @@ "UMLSConceptUID": "C0152327", "CodeMeaning": "Posterior cerebral commissure", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "279336005" + "SNOMEDCTConceptID": "279336005", + "3dSlicerIntegerLabel": 104 }, { "recommendedDisplayRGBValue": [ @@ -2978,7 +3363,8 @@ "UMLSConceptUID": "C0033572", "CodeMeaning": "Prostate", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "41216001" + "SNOMEDCTConceptID": "41216001", + "3dSlicerIntegerLabel": 238 }, { "recommendedDisplayRGBValue": [ @@ -2993,7 +3379,8 @@ "UMLSConceptUID": "C0034086", "CodeMeaning": "Pulmonary valve", "contextGroupName": "Mediastinum Anatomy Finding or Feature", - "SNOMEDCTConceptID": "39057004" + "SNOMEDCTConceptID": "39057004", + "3dSlicerIntegerLabel": 190 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -3016,7 +3403,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 58 }, { "recommendedDisplayRGBValue": [ @@ -3031,10 +3419,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 59 } ], - "SNOMEDCTConceptID": "89278009" + "SNOMEDCTConceptID": "89278009", + "3dSlicerIntegerLabel": 190 }, { "recommendedDisplayRGBValue": [ @@ -3049,7 +3439,8 @@ "UMLSConceptUID": "C0035359", "CodeMeaning": "Retroperitoneal space", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "82849001" + "SNOMEDCTConceptID": "82849001", + "3dSlicerIntegerLabel": 210 }, { "recommendedDisplayRGBValue": [ @@ -3064,7 +3455,8 @@ "UMLSConceptUID": "C0225883", "CodeMeaning": "Right Ventricle", "contextGroupName": "Cardiac Structure Segmentation Types", - "SNOMEDCTConceptID": "53085002" + "SNOMEDCTConceptID": "53085002", + "3dSlicerIntegerLabel": 185 }, { "recommendedDisplayRGBValue": [ @@ -3079,7 +3471,8 @@ "UMLSConceptUID": "C0036098", "CodeMeaning": "Salivary gland", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "385294005" + "SNOMEDCTConceptID": "385294005", + "3dSlicerIntegerLabel": 127 }, { "contextGroupName": "Pelvic Organ Segmentation Types", @@ -3102,7 +3495,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 239 }, { "recommendedDisplayRGBValue": [ @@ -3117,10 +3511,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 240 } ], - "SNOMEDCTConceptID": "64739004" + "SNOMEDCTConceptID": "64739004", + "3dSlicerIntegerLabel": 127 }, { "contextGroupName": "Endoscopy Anatomic Regions", @@ -3143,7 +3539,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 253 }, { "recommendedDisplayRGBValue": [ @@ -3158,10 +3555,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 254 } ], - "SNOMEDCTConceptID": "16982005" + "SNOMEDCTConceptID": "16982005", + "3dSlicerIntegerLabel": 240 }, { "recommendedDisplayRGBValue": [ @@ -3176,7 +3575,8 @@ "UMLSConceptUID": "C0222166", "CodeMeaning": "Skin of abdomen", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "75093004" + "SNOMEDCTConceptID": "75093004", + "3dSlicerIntegerLabel": 243 }, { "recommendedDisplayRGBValue": [ @@ -3191,7 +3591,8 @@ "UMLSConceptUID": "C0222149", "CodeMeaning": "Skin of chest", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "74160004" + "SNOMEDCTConceptID": "74160004", + "3dSlicerIntegerLabel": 197 }, { "recommendedDisplayRGBValue": [ @@ -3206,7 +3607,8 @@ "UMLSConceptUID": "C0037303", "CodeMeaning": "Skull", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "89546000" + "SNOMEDCTConceptID": "89546000", + "3dSlicerIntegerLabel": 140 }, { "recommendedDisplayRGBValue": [ @@ -3221,7 +3623,8 @@ "UMLSConceptUID": "C0021852", "CodeMeaning": "Small Intestine", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "30315005" + "SNOMEDCTConceptID": "30315005", + "3dSlicerIntegerLabel": 213 }, { "recommendedDisplayRGBValue": [ @@ -3236,7 +3639,8 @@ "UMLSConceptUID": "C0030219", "CodeMeaning": "Soft palate", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "49460000" + "SNOMEDCTConceptID": "49460000", + "3dSlicerIntegerLabel": 131 }, { "recommendedDisplayRGBValue": [ @@ -3251,7 +3655,8 @@ "UMLSConceptUID": "C0037925", "CodeMeaning": "Spinal cord", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "2748008" + "SNOMEDCTConceptID": "2748008", + "3dSlicerIntegerLabel": 115 }, { "recommendedDisplayRGBValue": [ @@ -3266,7 +3671,8 @@ "UMLSConceptUID": "C0475853", "CodeMeaning": "Spinal cord gray matter", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "12958003" + "SNOMEDCTConceptID": "12958003", + "3dSlicerIntegerLabel": 116 }, { "recommendedDisplayRGBValue": [ @@ -3281,7 +3687,8 @@ "UMLSConceptUID": "C0458457", "CodeMeaning": "Spinal cord white matter", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "27088001" + "SNOMEDCTConceptID": "27088001", + "3dSlicerIntegerLabel": 117 }, { "recommendedDisplayRGBValue": [ @@ -3296,7 +3703,8 @@ "UMLSConceptUID": "C0038293", "CodeMeaning": "Sternum", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "56873002" + "SNOMEDCTConceptID": "56873002", + "3dSlicerIntegerLabel": 202 }, { "recommendedDisplayRGBValue": [ @@ -3311,7 +3719,8 @@ "UMLSConceptUID": "C0038351", "CodeMeaning": "Stomach", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "69695003" + "SNOMEDCTConceptID": "69695003", + "3dSlicerIntegerLabel": 211 }, { "recommendedDisplayRGBValue": [ @@ -3326,7 +3735,8 @@ "UMLSConceptUID": "C0038527", "CodeMeaning": "Subarachnoid space", "contextGroupName": "CNS Tissue Segmentation Types", - "SNOMEDCTConceptID": "35951006" + "SNOMEDCTConceptID": "35951006", + "3dSlicerIntegerLabel": 114 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -3349,7 +3759,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 71 }, { "recommendedDisplayRGBValue": [ @@ -3364,10 +3775,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 72 } ], - "SNOMEDCTConceptID": "70007007" + "SNOMEDCTConceptID": "70007007", + "3dSlicerIntegerLabel": 114 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -3390,7 +3803,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 74 }, { "recommendedDisplayRGBValue": [ @@ -3405,10 +3819,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 75 } ], - "SNOMEDCTConceptID": "89202009" + "SNOMEDCTConceptID": "89202009", + "3dSlicerIntegerLabel": 72 }, { "contextGroupName": "Craniofacial Anatomic Regions", @@ -3431,7 +3847,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 145 }, { "recommendedDisplayRGBValue": [ @@ -3446,10 +3863,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 146 } ], - "SNOMEDCTConceptID": "60911003" + "SNOMEDCTConceptID": "60911003", + "3dSlicerIntegerLabel": 75 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -3472,7 +3891,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 44 }, { "recommendedDisplayRGBValue": [ @@ -3487,10 +3907,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 45 } ], - "SNOMEDCTConceptID": "78277001" + "SNOMEDCTConceptID": "78277001", + "3dSlicerIntegerLabel": 146 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -3513,7 +3935,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 66 }, { "recommendedDisplayRGBValue": [ @@ -3528,10 +3951,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 67 } ], - "SNOMEDCTConceptID": "119406000" + "SNOMEDCTConceptID": "119406000", + "3dSlicerIntegerLabel": 45 }, { "contextGroupName": "Common Anatomic Regions", @@ -3554,7 +3979,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 271 }, { "recommendedDisplayRGBValue": [ @@ -3569,10 +3995,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 272 } ], - "SNOMEDCTConceptID": "68367000" + "SNOMEDCTConceptID": "68367000", + "3dSlicerIntegerLabel": 67 }, { "recommendedDisplayRGBValue": [ @@ -3587,7 +4015,8 @@ "UMLSConceptUID": "C0581269", "CodeMeaning": "Thoracic spine", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "122495006" + "SNOMEDCTConceptID": "122495006", + "3dSlicerIntegerLabel": 200 }, { "recommendedDisplayRGBValue": [ @@ -3602,7 +4031,8 @@ "UMLSConceptUID": "C0817096", "CodeMeaning": "Thorax", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "51185008" + "SNOMEDCTConceptID": "51185008", + "3dSlicerIntegerLabel": 169 }, { "recommendedDisplayRGBValue": [ @@ -3617,7 +4047,8 @@ "UMLSConceptUID": "C0040113", "CodeMeaning": "Thymus", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "9875009" + "SNOMEDCTConceptID": "9875009", + "3dSlicerIntegerLabel": 195 }, { "recommendedDisplayRGBValue": [ @@ -3632,7 +4063,8 @@ "UMLSConceptUID": "C0040113", "CodeMeaning": "Thymus Gland", "contextGroupName": "Mediastinum Anatomy Finding or Feature", - "SNOMEDCTConceptID": "9875009" + "SNOMEDCTConceptID": "9875009", + "3dSlicerIntegerLabel": 195 }, { "recommendedDisplayRGBValue": [ @@ -3647,7 +4079,8 @@ "UMLSConceptUID": "C0040132", "CodeMeaning": "Thyroid", "contextGroupName": "Mediastinum Anatomy Finding or Feature", - "SNOMEDCTConceptID": "69748006" + "SNOMEDCTConceptID": "69748006", + "3dSlicerIntegerLabel": 163 }, { "recommendedDisplayRGBValue": [ @@ -3662,7 +4095,8 @@ "UMLSConceptUID": "C0040408", "CodeMeaning": "Tongue", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "21974007" + "SNOMEDCTConceptID": "21974007", + "3dSlicerIntegerLabel": 130 }, { "recommendedDisplayRGBValue": [ @@ -3677,7 +4111,8 @@ "UMLSConceptUID": "C0040426", "CodeMeaning": "Tooth", "contextGroupName": "Craniofacial Anatomic Regions", - "SNOMEDCTConceptID": "38199008" + "SNOMEDCTConceptID": "38199008", + "3dSlicerIntegerLabel": 11 }, { "recommendedDisplayRGBValue": [ @@ -3692,7 +4127,8 @@ "UMLSConceptUID": "C0040578", "CodeMeaning": "Trachea", "contextGroupName": "Thoracic Tissue Segmentation Types", - "SNOMEDCTConceptID": "44567001" + "SNOMEDCTConceptID": "44567001", + "3dSlicerIntegerLabel": 170 }, { "recommendedDisplayRGBValue": [ @@ -3707,7 +4143,8 @@ "UMLSConceptUID": "C0040960", "CodeMeaning": "Tricuspid Valve", "contextGroupName": "Mediastinum Anatomy Finding or Feature", - "SNOMEDCTConceptID": "46030003" + "SNOMEDCTConceptID": "46030003", + "3dSlicerIntegerLabel": 188 }, { "contextGroupName": "CNS Tissue Segmentation Types", @@ -3730,7 +4167,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 80 }, { "recommendedDisplayRGBValue": [ @@ -3745,10 +4183,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 81 } ], - "SNOMEDCTConceptID": "26230003" + "SNOMEDCTConceptID": "26230003", + "3dSlicerIntegerLabel": 188 }, { "contextGroupName": "Common Anatomic Regions", @@ -3771,7 +4211,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 255 }, { "recommendedDisplayRGBValue": [ @@ -3786,10 +4227,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 256 } ], - "SNOMEDCTConceptID": "40983000" + "SNOMEDCTConceptID": "40983000", + "3dSlicerIntegerLabel": 81 }, { "contextGroupName": "Common Anatomic Regions", @@ -3812,7 +4255,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 251 }, { "recommendedDisplayRGBValue": [ @@ -3827,10 +4271,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 252 } ], - "SNOMEDCTConceptID": "53120007" + "SNOMEDCTConceptID": "53120007", + "3dSlicerIntegerLabel": 256 }, { "contextGroupName": "Thoracic Tissue Segmentation Types", @@ -3853,7 +4299,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 174 }, { "recommendedDisplayRGBValue": [ @@ -3868,10 +4315,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 175 } ], - "SNOMEDCTConceptID": "45653009" + "SNOMEDCTConceptID": "45653009", + "3dSlicerIntegerLabel": 252 }, { "recommendedDisplayRGBValue": [ @@ -3886,7 +4335,8 @@ "UMLSConceptUID": "C0041967", "CodeMeaning": "Urethra", "contextGroupName": "Common Anatomic Regions", - "SNOMEDCTConceptID": "13648007" + "SNOMEDCTConceptID": "13648007", + "3dSlicerIntegerLabel": 227 }, { "recommendedDisplayRGBValue": [ @@ -3901,7 +4351,8 @@ "UMLSConceptUID": "C1508753", "CodeMeaning": "Urinary system", "contextGroupName": "Abdominal Organ Segmentation Types", - "SNOMEDCTConceptID": "122489005" + "SNOMEDCTConceptID": "122489005", + "3dSlicerIntegerLabel": 221 }, { "recommendedDisplayRGBValue": [ @@ -3916,7 +4367,8 @@ "UMLSConceptUID": "C0042149", "CodeMeaning": "Uterus", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "35039007" + "SNOMEDCTConceptID": "35039007", + "3dSlicerIntegerLabel": 231 }, { "recommendedDisplayRGBValue": [ @@ -3931,7 +4383,8 @@ "UMLSConceptUID": "C0042232", "CodeMeaning": "Vagina", "contextGroupName": "Pelvic Organ Segmentation Types", - "SNOMEDCTConceptID": "76784001" + "SNOMEDCTConceptID": "76784001", + "3dSlicerIntegerLabel": 236 }, { "contextGroupName": "Pelvic Organ Segmentation Types", @@ -3954,7 +4407,8 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 241 }, { "recommendedDisplayRGBValue": [ @@ -3969,10 +4423,12 @@ "UMLSConceptUID": "C0205091", "CodeMeaning": "Left", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "7771000" + "SNOMEDCTConceptID": "7771000", + "3dSlicerIntegerLabel": 242 } ], - "SNOMEDCTConceptID": "57671007" + "SNOMEDCTConceptID": "57671007", + "3dSlicerIntegerLabel": 236 }, { "contextGroupName": "Common Anatomic Regions", @@ -3995,10 +4451,12 @@ "UMLSConceptUID": "C0205090", "CodeMeaning": "Right", "contextGroupName": "Laterality", - "SNOMEDCTConceptID": "24028007" + "SNOMEDCTConceptID": "24028007", + "3dSlicerIntegerLabel": 153 } ], - "SNOMEDCTConceptID": "13881006" + "SNOMEDCTConceptID": "13881006", + "3dSlicerIntegerLabel": 242 } ], "showAnatomy": false @@ -4025,7 +4483,8 @@ "UMLSConceptUID": "C0027551", "CodeValue": "A-30360", "contextGroupName": "Chest Non-Lesion Object Type", - "SNOMEDCTConceptID": "79068005" + "SNOMEDCTConceptID": "79068005", + "3dSlicerIntegerLabel": 291 }, { "recommendedDisplayRGBValue": [ @@ -4040,7 +4499,8 @@ "UMLSConceptUID": "C0027551", "CodeValue": "A-30360", "contextGroupName": "Device Segmentation Types", - "SNOMEDCTConceptID": "79068005" + "SNOMEDCTConceptID": "79068005", + "3dSlicerIntegerLabel": 291 }, { "recommendedDisplayRGBValue": [ @@ -4055,7 +4515,8 @@ "UMLSConceptUID": "C0016542", "CodeValue": "M-30400", "contextGroupName": "Artifact Segmentation Types", - "SNOMEDCTConceptID": "19227008" + "SNOMEDCTConceptID": "19227008", + "3dSlicerIntegerLabel": 9 }, { "recommendedDisplayRGBValue": [ @@ -4070,7 +4531,8 @@ "UMLSConceptUID": "C0043045", "CodeValue": "F-61779", "contextGroupName": "Abstract Segmentation Types", - "SNOMEDCTConceptID": "289925000" + "SNOMEDCTConceptID": "289925000", + "3dSlicerIntegerLabel": 10 } ], "showAnatomy": true @@ -4097,7 +4559,8 @@ "UMLSConceptUID": "C0302148", "CodeValue": "M-35000", "contextGroupName": "Lesion Segmentation Types", - "SNOMEDCTConceptID": "75753009" + "SNOMEDCTConceptID": "75753009", + "3dSlicerIntegerLabel": 34 }, { "recommendedDisplayRGBValue": [ @@ -4112,7 +4575,8 @@ "UMLSConceptUID": "C0010709", "CodeValue": "M-3340A", "contextGroupName": "Lesion Segmentation Types", - "SNOMEDCTConceptID": "367643001" + "SNOMEDCTConceptID": "367643001", + "3dSlicerIntegerLabel": 309 }, { "recommendedDisplayRGBValue": [ @@ -4127,7 +4591,8 @@ "UMLSConceptUID": "C0013604", "CodeValue": "M-36300", "contextGroupName": "Lesion Segmentation Types", - "SNOMEDCTConceptID": "79654002" + "SNOMEDCTConceptID": "79654002", + "3dSlicerIntegerLabel": 31 }, { "recommendedDisplayRGBValue": [ @@ -4142,7 +4607,8 @@ "UMLSConceptUID": "C1704212", "CodeValue": "M-35300", "contextGroupName": "Lesion Segmentation Types", - "SNOMEDCTConceptID": "55584005" + "SNOMEDCTConceptID": "55584005", + "3dSlicerIntegerLabel": 35 }, { "recommendedDisplayRGBValue": [ @@ -4157,7 +4623,8 @@ "UMLSConceptUID": "C0019080", "CodeValue": "M-37000", "contextGroupName": "Lesion Segmentation Types", - "SNOMEDCTConceptID": "50960005" + "SNOMEDCTConceptID": "50960005", + "3dSlicerIntegerLabel": 32 }, { "recommendedDisplayRGBValue": [ @@ -4172,7 +4639,8 @@ "UMLSConceptUID": "C0577559", "CodeValue": "M-03000", "contextGroupName": "Lesion Segmentation Types", - "SNOMEDCTConceptID": "4147007" + "SNOMEDCTConceptID": "4147007", + "3dSlicerIntegerLabel": 7 }, { "recommendedDisplayRGBValue": [ @@ -4187,7 +4655,8 @@ "UMLSConceptUID": "C0027540", "CodeValue": "M-54000", "contextGroupName": "Lesion Segmentation Types", - "SNOMEDCTConceptID": "6574001" + "SNOMEDCTConceptID": "6574001", + "3dSlicerIntegerLabel": 33 } ], "showAnatomy": true @@ -4214,7 +4683,8 @@ "UMLSConceptUID": "C0005388", "CodeValue": "T-60650", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "70150004" + "SNOMEDCTConceptID": "70150004", + "3dSlicerIntegerLabel": 26 }, { "recommendedDisplayRGBValue": [ @@ -4229,7 +4699,8 @@ "UMLSConceptUID": "C0005889", "CodeValue": "T-D0070", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "32457005" + "SNOMEDCTConceptID": "32457005", + "3dSlicerIntegerLabel": 30 }, { "recommendedDisplayRGBValue": [ @@ -4244,7 +4715,8 @@ "UMLSConceptUID": "C0015733", "CodeValue": "T-59666", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "39477002" + "SNOMEDCTConceptID": "39477002", + "3dSlicerIntegerLabel": 28 }, { "recommendedDisplayRGBValue": [ @@ -4259,7 +4731,8 @@ "UMLSConceptUID": "C0017110", "CodeValue": "C-10080", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "74947009" + "SNOMEDCTConceptID": "74947009", + "3dSlicerIntegerLabel": 29 }, { "recommendedDisplayRGBValue": [ @@ -4274,7 +4747,8 @@ "UMLSConceptUID": "C0042036", "CodeValue": "T-70060", "contextGroupName": "Common Tissue Segmentation Types", - "SNOMEDCTConceptID": "78014005" + "SNOMEDCTConceptID": "78014005", + "3dSlicerIntegerLabel": 27 } ], "showAnatomy": false diff --git a/doc/segContexts/resources/add_slicer_ids.py b/doc/segContexts/resources/add_slicer_ids.py new file mode 100644 index 00000000..16ada330 --- /dev/null +++ b/doc/segContexts/resources/add_slicer_ids.py @@ -0,0 +1,49 @@ +# helper script to populate Slicer integer labels in the +# segmentation context JSON file from Slicer LUT CSV file +# +# Usage: +# $ python resources/add_slicer_ids.py resources/SlicerGenericAnatomy.csv \ +# SegmentationCategoryTypeModifier-SlicerGeneralAnatomy.json \ +# SegmentationCategoryTypeModifier-SlicerGeneralAnatomy_updated.json + +import csv, sys, pandas, json, copy + +def lookup_slicer_int_from_text(slicer_lut, slicer_text_label): + try: + slicer_int_label = int(slicer_lut[slicer_lut["Text Label"] == slicer_text_label]["Integer Label"].values[0]) + except IndexError: + print("Failed to find "+slicer_text_label+" in the CSV file") + raise IndexError + + return slicer_int_label + +slicer_lut = pandas.read_csv(sys.argv[1]) +slicer_lut = slicer_lut.apply(lambda x: x.str.strip() if x.dtype == "object" else x) + +with open(sys.argv[2], 'r') as json_file: + seg_context = json.load(json_file) + +new_seg_context = copy.deepcopy(seg_context) + +for category_id,category in enumerate(seg_context["SegmentationCodes"]["Category"]): + for type_id,type in enumerate(category["Type"]): + try: + slicer_label = type["3dSlicerLabel"] + except KeyError: + if not "Modifier" in type.keys(): # otherwise it's not a concern + print("Failed to find 3dSlicerLabel in "+str(type)) + + slicer_int_label = lookup_slicer_int_from_text(slicer_lut, slicer_label) + new_seg_context["SegmentationCodes"]["Category"][category_id]["Type"][type_id]["3dSlicerIntegerLabel"] = slicer_int_label + + if "Modifier" in type.keys(): + for modifier_id,modifier in enumerate(type["Modifier"]): + try: + slicer_label = modifier["3dSlicerLabel"] + except KeyError: + print("Failed to find 3dSlicerLabel in modifier for "+json.dumps(type, indent=2)) + slicer_int_label = lookup_slicer_int_from_text(slicer_lut, slicer_label) + new_seg_context["SegmentationCodes"]["Category"][category_id]["Type"][type_id]["Modifier"][modifier_id]["3dSlicerIntegerLabel"] = slicer_int_label + +with open(sys.argv[3],"w") as new_seg_context_file: + json.dump(new_seg_context, new_seg_context_file, indent=2)