Merge pull request #194 from asmeurer/intersphinx-registry #531
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| name: Tests | |
| on: [push, pull_request] | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11', '3.12', '3.13-dev'] | |
| # https://numpy.org/neps/nep-0029-deprecation_policy.html | |
| numpy-version: ['1.22', 'latest', 'dev'] | |
| exclude: | |
| - python-version: '3.12' | |
| numpy-version: '1.22' | |
| - python-version: '3.13-dev' | |
| numpy-version: '1.22' | |
| fail-fast: false | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Dependencies | |
| run: | | |
| set -x | |
| set -e | |
| python -m pip install -r requirements-dev.txt | |
| if [[ ${{ matrix.numpy-version }} == 'latest' ]]; then | |
| python -m pip install --upgrade numpy | |
| elif [[ ${{ matrix.numpy-version }} == 'dev' ]]; then | |
| python -m pip install --pre --upgrade --extra-index https://pypi.anaconda.org/scientific-python-nightly-wheels/simple numpy | |
| else | |
| python -m pip install --upgrade numpy==${{ matrix.numpy-version }}.* | |
| fi | |
| - name: Test Installation | |
| run: | | |
| python -m pip install --verbose . | |
| # COVERAGE_CORE=sysmon does not work with Cython. Since coverage is | |
| # really slow without it (see | |
| # https://github.com/nedbat/coveragepy/issues/1665), just omit Cython | |
| # coverage in 3.12. Hopefully by the time it is our minimal version it | |
| # will work with Cython, or trace coverage will be faster again. | |
| - name: Set CYTHON_COVERAGE=1 | |
| run: echo "CYTHON_COVERAGE=1" >> $GITHUB_ENV | |
| if: matrix.python-version != '3.12' && matrix.python-version != '3.13-dev' | |
| - name: Disable Coverage Plugin | |
| run: sed -i '/plugins = Cython.Coverage/d' .coveragerc | |
| if: matrix.python-version == '3.12' || matrix.python-version == '3.13-dev' | |
| - name: In-place build | |
| run: | | |
| python setup.py clean | |
| python setup.py build_ext --inplace | |
| - name: Run Doctests | |
| run: | | |
| ./run_doctests | |
| # A NumPy 2.0 compatible skimage doesn't support 3.9, and we need a | |
| # version of matplotlib that requires NumPy 1.23. Easiest to just | |
| # skip this for now. | |
| if: matrix.numpy-version != 'dev' && matrix.python-version != '3.9' && matrix.numpy-version != '1.22' | |
| - name: Run Slotscheck | |
| run: | | |
| python -m slotscheck ndindex | |
| # Enable experimental faster sys.monitoring coverage for Python 3.12 | |
| - name: Set COVERAGE_CORE=sysmon | |
| run: echo "COVERAGE_CORE=sysmon" >> $GITHUB_ENV | |
| if: matrix.python-version == '3.12' || matrix.python-version == '3.13-dev' | |
| - name: Run Tests | |
| run: | | |
| set -x | |
| set -e | |
| python -We:invalid -We::SyntaxWarning -m compileall -f -q ndindex/ | |
| # The coverage requirement check is done by the coverage report line below | |
| PYTEST_FLAGS="$PYTEST_FLAGS -v --cov-fail-under=0"; | |
| pytest $PYTEST_FLAGS | |
| # Coverage. This also sets the failing status if the | |
| # coverage is not 100%. Travis sometimes cuts off the last command, which is | |
| # why we print stuff at the end. | |
| if ! coverage report -m; then | |
| echo "Coverage failed"; | |
| false; | |
| else | |
| echo "Coverage passed"; | |
| fi; |