| Date | Presenter | Topic | Materials |
|---|---|---|---|
| Sept. 18th | Alexander Grueneberg | HPCC: 2018 Environment Update & Migration | Slides, Announcement, Mapping between Moab/TORQUE and Slurm commands, Mapping between Moab/TORQUE and Slurm job submission parameters, Mapping between Moab/TORQUE and Slurm environment variables |
| Sept. 25th | Gustavo | Complex Trait Prediction with heterogenoeus populations? | Will discuss some preliminary ideas... |
| Oct. 2nd | Bea Cuyabano | heritability and prediction with genomic models | |
| Oct. 9th | Agustin Gonzalez | A modification of the PLAGE method: Multi-Omic Gene Set and Gene Selection Analysis | I'll review the basics of gene set analysis, using the PLAGE method as an example. I'll also show a modification I used in my thesis, based on sparse SVD ( PLAGE method, sSVD, Comparison of GSA methods) |
| Oct. 16th | Marco Lopez-Cruz | Better Estimation of Genetic Covariance Matrices using Penalized Maximum Likelihood | The Disccussion will be based on these two papers: Meyer & Kirkpatrick (2010) and Meyer (2011) |
| Oct. 23rd | Mengying Sun | Locally dependent screening: A Strategy for developing an accurate genomic predictor using Big Data | Slides |
| Oct. 30th | Mengying & Scott | Discussion on Polygenic Risk Scores | paper 1 and paper 2 and slides |
| Nov. 6th | |||
| Nov. 20th | |||
| Nov. 27th | Alexa Lupi | ||
| Thursday, Nov 29th (2pm) | Maria Martinez Castillero | Genetic analysis of fertilty traits and study of GxE in dairy cattle | 1240 Anthony Hall |
| Dec. 4th | Gabriel Rovere | Prediction of individual fatty acids content in dairy milk samples using mid-infrared spectra data |