Merge pull request #93 from RIVM-bioinformatics/dev

update ampligone and remove --force flag from docs CI workflow
RIVM-bioinformatics · Apr 3, 2024 · 8fdbd8d · 8fdbd8d
2 parents 9143c42 + b6a92c8
commit 8fdbd8d
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diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
@@ -56,4 +56,4 @@ jobs:
           pip install -r docs-requirements.txt
       - name: Publish docs
         run: |
-          mike deploy --config-file mkdocs.yml --push --force --update-aliases $(git tag --sort=committerdate | tail -1 | sed 's/v//') latest
+          mike deploy --config-file mkdocs.yml --push --update-aliases $(git tag --sort=committerdate | tail -1 | sed 's/v//') latest
diff --git a/ViroConstrictor/workflow/envs/Clean.yaml b/ViroConstrictor/workflow/envs/Clean.yaml
@@ -6,7 +6,7 @@ channels:
   - nodefaults
 dependencies:
   - python>=3.8
-  - ampligone==1.3.0
+  - ampligone==1.3.1
   - pandas>=1.3
   - minimap2==2.24
   - mappy==2.24