0.3.1 - fix fasta input

• fixed --fasta input of pre-assembled genomes (#8)
• fixed reference genome input to be optional (#8)

0.3.0

• Fixed --shortreads, accepts paired end data
• Added support for multi-part AMR genes: prediction checks if all parts are present
• Added --update_card option to download newest CARD database for the prediction
• Updated the provided CARD database

0.2.0 - custom cutoffs added

added parameters to set cutoffs for keeping AMR gene hits
--min_coverage_percent
--min_identity_percent

0.1.0 - initial release

Very first fully containerized public version