Fixed dependencies

RedesignScience · Apr 20, 2024 · bda6799 · bda6799
1 parent d6a7328
commit bda6799
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Showing 6 changed files with 6 additions and 8 deletions.
diff --git a/devtools/conda-envs/deployment_env.yaml b/devtools/conda-envs/deployment_env.yaml
@@ -8,7 +8,6 @@ dependencies:
   - numpy
   - openmm
   - pyyaml
-  - xmltodict
 
   # Conda build
   - anaconda-client

diff --git a/devtools/conda-envs/docs_env.yaml b/devtools/conda-envs/docs_env.yaml
@@ -8,12 +8,12 @@ dependencies:
   - openmm
   - numpy
   - pyyaml
-  - xmltodict
 
     # Testing
   - scipy
   - openmmtools
   - mdtraj
+  - networkx
   - pytest
   - pytest-cov
   - codecov

diff --git a/devtools/conda-envs/lint_env.yaml b/devtools/conda-envs/lint_env.yaml
@@ -5,12 +5,14 @@ dependencies:
     # Base depends
   - python
   - openmm>=7.6
-  - openmmtools
-  - mdtraj
   - numpy
+
+    # Testing
   - scipy
+  - openmmtools
+  - mdtraj
+  - networkx
   - pytest
-  - xmltodict
 
     # Linting
   - flake8

diff --git a/devtools/conda-envs/test_env.yaml b/devtools/conda-envs/test_env.yaml
@@ -8,7 +8,6 @@ dependencies:
   - openmm
   - numpy
   - pyyaml
-  - xmltodict
 
     # Testing
   - scipy

diff --git a/devtools/conda-recipes/anaconda/meta.yaml b/devtools/conda-recipes/anaconda/meta.yaml
@@ -23,7 +23,6 @@ requirements:
     - numpy
     - openmm
     - pyyaml
-    - xmltodict
 
 test:
   imports:

diff --git a/pyproject.toml b/pyproject.toml
@@ -24,7 +24,6 @@ dependencies = [
     "numpy",
     "openmm",
     "pyyaml",
-    "xmltodict",
 ]
 
 # Update the urls once the hosting is set up.