This project provides python classes and functions to parse the text file containing the entire BRENDA enzyme database (https://www.brenda-enzymes.org)
This is an ongoing project!
pip install brendapyrser
or
-
Git clone project to local directory.
In terminal navigate to directory and enter:
python setup.py install
Due to BRENDA's license, BRENDA's database cannot be downloaded directly by the parser, instead, the user is asked to download the database as a text file after accepting usage conditions here.
You can find a jupyter notebook with usage examples here.
Contributions are always more than welcome! Feel free to fork, make changes and pull requests. If you don't know where to start, you can always browse open issues. Thanks!
If you use this software, please cite it as below:
Robaina-Estévez, S. (2022). BRENDApyrser: a Python package to parse and manipulate the BRENDA database (Version 0.0.3)[Computer software]. https://doi.org/10.5281/zenodo.7026555