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@SCAI-BIO

Fraunhofer SCAI Bioinformatics Department

Deparment of Bioinformatics at Fraunhofer SCAI

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  1. MultiGML MultiGML Public

    MultiGML

    Python 7 4

  2. ExMed-BERT ExMed-BERT Public

    Python 6 1

  3. STEP STEP Public

    Data and code for STEP (Siamese Twin deep sequence Embedding of Proteins) approach.

    Python 5 3

  4. MultiNODEs MultiNODEs Public

    Python 5 2

  5. datastew datastew Public

    Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

    Python 4

  6. index index Public

    Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization

    TypeScript 3

Repositories

Showing 10 of 35 repositories
  • datastew Public

    Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

    SCAI-BIO/datastew’s past year of commit activity
    Python 4 Apache-2.0 0 13 2 Updated Nov 4, 2024
  • PDataViewer Public

    Parkinsons Disease cohort landscape visualization

    SCAI-BIO/PDataViewer’s past year of commit activity
    TypeScript 3 Apache-2.0 0 8 0 Updated Oct 28, 2024
  • index Public

    Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization

    SCAI-BIO/index’s past year of commit activity
    TypeScript 3 Apache-2.0 0 4 0 Updated Oct 18, 2024
  • covid-NDD-comorbidity-NLP Public

    This work aims to synthesize and analyze the growing body of literature connecting COVID-19 infections with potential long-term neurological impacts, particularly neurodegenerative processes.

    SCAI-BIO/covid-NDD-comorbidity-NLP’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 18, 2024
  • causal-npi-effects Public

    A causal machine learning framework to assess effects of non-pharmaceutical interventions on pandemic disease spread.

    SCAI-BIO/causal-npi-effects’s past year of commit activity
    Python 0 0 0 0 Updated Oct 15, 2024
  • syndat Public

    Synthetic data quality evaluation & visualization

    SCAI-BIO/syndat’s past year of commit activity
    Python 1 MIT 0 2 0 Updated Sep 30, 2024
  • MMPK-SciML Public

    Official implementation of the paper Scientific Machine learning for predicting plasma concentrations in anti-cancer therapy

    SCAI-BIO/MMPK-SciML’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 23, 2024
  • Dynamic_Ensemble Public

    A Dynamic Ensemble Model for short-term Forecasting in Pandemic Situations

    SCAI-BIO/Dynamic_Ensemble’s past year of commit activity
    Python 0 0 0 0 Updated Sep 18, 2024
  • SCAI-BIO/wasterwater_analysis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 18, 2024
  • BiomarkerOntology Public

    The Biomarker Ontology

    SCAI-BIO/BiomarkerOntology’s past year of commit activity
    0 0 0 0 Updated Aug 16, 2024

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