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Update requirements.txt
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michade committed Oct 16, 2024
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5 changes: 5 additions & 0 deletions README.md
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Expand Up @@ -4,6 +4,11 @@ _Author: Michał Denkiewicz (michal.denkiewicz@pw.edu.pl)_

This repository is a supplement to the [PAPER INFO HERE] manuscript.

The code was tested on Python 3.10.14, to install the required packages use:
```
pip install -r requirements.txt
```

## Analysis code

The Following notebooks contain the code for data analysis of the raw cKNOTs results.
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12 changes: 12 additions & 0 deletions requirements.txt
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matplotlib==3.7.5
networkx==3.3
numpy==1.25.2
pandas==2.2.3
polychrom==0.1.1
python_igraph==0.11.6
pyvista==0.44.1
seaborn==0.13.2
structuregenerator==0.5
tqdm==4.65.2
pyranges=0.1.2

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