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@ReloGene-Bioinformatics

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SamakshSingh99/README.md

Hi! I'm Samaksh

πŸ‘Ύ Welcome to my GitHub! πŸ‘Ύ

About Me

I am a passionate and creative bioinformatician, data scientist and AI enthusiast, currently diving deep into the world of bioinformatics, machine learning, and deep learning. With a solid academic foundation, global hands-on experience, and commitment to solve complex biological problems, I have a thirst to learn more and do miracles in the field of Bioinformatics.

πŸ‘¨πŸ»β€πŸŽ“ Education

  • MSc in Applied Bioinformatics, Cranfield University, United Kingdom (2022-23)


  • B.Tech in Bioengineering, VIT Bhopal University, India (2018-22)



πŸ‘¨πŸ»β€πŸ’» Experience

  • Research Associate (AI/ML & Bioinformatics), National University of Singapore, Singapore (Present)

  • Contributing to multiple collaborative projects at the Electron Microscopy Department using AI/ML and deep learning techniques to analyze Electron Microscopy-generated images. πŸ”¬πŸ¦ 
  • Involved in bioinformatics research within the Department of Microbiology and Immunology, focusing on the differentiation of erythroleukemic cell lines under various conditions, with the goal of advancing our understanding of cell development and disease mechanisms πŸ§¬πŸ’».

  • Research Assistant (Bioiformatics), Cranfield University, United Kingdom (October 2023 - February 2024)

  • Contributed to EU Horizon2020 Project Nutrisheild β€œFact-based personalised nutrition for the young Grant Agreement ID: 818110” (https://nutrishield-project.eu). πŸ‡ͺπŸ‡Ί
  • Involved in WGS analysis for Mothers and their term & preterm babies, and development of PRS models to assess corresponding risk associated with several comorbidities. πŸ§‘β€πŸ§’πŸ§¬πŸ“ˆ

  • Research Intern (Bioinformatics), National University of Singapore (Remote; May 2023 - September 2023)

Β Β Β Β 

  • Part of master’s thesis for MSc Applied Bioinformatics course at Cranfield University. πŸ“š
  • Performed comparative analysis between in vitro erythroleukemic Bulk RNA-Seq data and Single Cell RNA-Seq data of in vivo bone marrow CD34+ hematopoietic stem cells (HSCs) to identify key genes responsible for enucleation. πŸ§¬πŸ‘¨πŸ»β€πŸ’»



πŸš€ Skills

πŸ’¬ Socials

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  1. GeneScoPy GeneScoPy Public

    Genome Assembly Sequence and GFF/GTF Analyser

    Python 2

  2. Single_Cell_Demultiplexing Single_Cell_Demultiplexing Public

    Single cell Demultiplexing for https://doi.org/10.1073/pnas.1915085117

    R 1

  3. WGS_Variant_Calling WGS_Variant_Calling Public

    Shell

  4. BeeTect BeeTect Public

    Python 1