config break fix #13

MANIFEST

@@ -1,4 +1,4 @@
 include README.md 
 include LICENSE
 include requirements.txt
-include sorn/*.ini
+include sorn/*.ini

build/lib/sorn/__init__.py

@@ -1,8 +1,8 @@
-from sorn.sorn import Simulator, Trainer
+from .sorn import Simulator, Trainer
 import logging
-from sorn.utils import *
+from .utils import *
 
 __author__ = "Saranraj Nambusubramaniyan"
-__version__ = "0.3.6"
+__version__ = "0.3.19"
 
 logging.basicConfig(level=logging.INFO)

build/lib/sorn/configuration.ini

@@ -0,0 +1,38 @@
+[Network_Config]
+
+# Number of neurons in the reservoir
+Ne = 200
+
+# Number of input units in the reservoir
+Nu = 10
+
+# Connection/Network type: Sparse or Dense
+
+network_type_ee = Sparse
+network_type_ei = Sparse
+network_type_ie = Dense
+
+# Mean number of incoming and outgoing connections per neuron
+lambda_ee = 20
+lambda_ei = 40
+lambda_ie = 100
+
+# Hebbian Learning rate 
+eta_stdp = 0.004
+
+# Anti-Hebbian learning rate
+eta_inhib = 0.001
+
+# Intrinsic plasticity constants    
+eta_ip = 0.01
+
+# Threshold initialization values
+te_max = 1.0
+ti_max = 0.5
+ti_min = 0.0
+te_min = 0.0
+
+# Mean and standard deviation of target firing rate , h_ip
+mu_ip = 0.1
+sigma_ip = 0.0 
+

build/lib/sorn/sorn.py

@@ -11,10 +11,7 @@
 import pickle
 
 parser = ConfigParser()
-cwd = os.path.dirname(os.path.abspath(__file__))
-
-config_file = r'./configuration.ini'
-
+config_file = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'configuration.ini')
 parser.read(config_file)
 
 class Sorn(object):

setup.py

@@ -10,7 +10,7 @@ def read(fname):
 
 setup(
     name = "sorn",
-    version = "0.3.6",
+    version = "0.3.19",
     author = "Saranraj Nambusubramaniyan",
     author_email = "saran_nns@hotmail.com",
     description ="Self-Organizing Recurrent Neural Networks",
@@ -19,7 +19,7 @@ def read(fname):
                   Spiking Cortical Networks, Neural Connectomics,Neuroscience, Artificial General Intelligence, Neural Information Processing""" ,
     url = "https://github.com/Saran-nns/sorn",
     packages=['sorn'],
-    data_files = ["LICENSE"],
+    data_files = ["LICENSE","sorn/configuration.ini"],
     long_description=read('README.md'),
     long_description_content_type = "text/markdown",
     classifiers=[
@@ -31,7 +31,7 @@ def read(fname):
         "Programming Language :: Python :: 3.6",
         "Programming Language :: Python :: 3.7",
     ],
-    include_package_data = True,
+    include_package_data = True,    
     install_requires = ['numpy','configparser','tqdm','scipy','seaborn'],
     zip_safe = False )
 

sorn.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: sorn
-Version: 0.3.6
+Version: 0.3.19
 Summary: Self-Organizing Recurrent Neural Networks
 Home-page: https://github.com/Saran-nns/sorn
 Author: Saranraj Nambusubramaniyan

sorn.egg-info/SOURCES.txt

@@ -2,6 +2,7 @@ LICENSE
 README.md
 setup.py
 sorn/__init__.py
+sorn/configuration.ini
 sorn/sorn.py
 sorn/test_sorn.py
 sorn/utils.py

sorn/__init__.py

@@ -1,8 +1,8 @@
-from sorn.sorn import Simulator, Trainer
+from .sorn import Simulator, Trainer
 import logging
-from sorn.utils import *
+from .utils import *
 
 __author__ = "Saranraj Nambusubramaniyan"
-__version__ = "0.3.6"
+__version__ = "0.3.19"
 
 logging.basicConfig(level=logging.INFO)

sorn/sorn.py

@@ -11,10 +11,7 @@
 import pickle
 
 parser = ConfigParser()
-cwd = os.path.dirname(os.path.abspath(__file__))
-
-config_file = r'./configuration.ini'
-
+config_file = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'configuration.ini')
 parser.read(config_file)
 
 class Sorn(object):