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default-source-descriptor.md

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Required Parameters for setting up a source descriptor. Refer to the specific ingestor docs for additional parameters to be included for ingestion.

Default Source Descriptor

  • sourceID: "SCR_016373-XenopusExpress-RIN"

  • name: "Xenopus Express"

  • scrID: "SCR_016373"

  • ingestMethod: "CSV"

  • ingestURL: "file:///home/ubuntu/dev/java/Foundry-Data/OriginalData/SCR_016373/XenopusExpress.csv"
    Note: Option for certain ingestors

  • transformScript: "/home/ubuntu/dev/java/Foundry-Data/Transformations/SCR_016373-XenopusExpress-RIN.trs"

  • primaryKeyJSONPath: "$.'RRID_suggested'"

  • useCache: "false"

  • dataModel: "Resource Information Network"

  • mappingFile: "/home/ubuntu/dev/java/Foundry-Data/Mappings/rin_prod.map"

  • qcRulesYamlFile: "/home/ubuntu/dev/java/Foundry-Data/QualityAssuranceRules/SCR_016373-XenopusExpress-RIN.yml"

  • collectionName: "SCR_016373-XenopusExpress-RIN"

  • enhancerParameters: This parameter is optional unless a specific enhancer needs to run

    enhancerParameters:
   "ResourceRelations": "{true|false}"
   "Semantic": "{true|false}"
   "RRIDMention": "{true|false}"
   "Resource": "{true|false}"
   "Validation": "{true|false}"

    Note: Enhancers are shut off by default, enhancers don't have to be explicitly set to false