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Update lifting master object alpha sort columns
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stufield committed Apr 12, 2024
1 parent 3ca3f98 commit e38552b
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Showing 2 changed files with 7 additions and 6 deletions.
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13 changes: 7 additions & 6 deletions tests/testthat/test-lift-adat.R
Original file line number Diff line number Diff line change
Expand Up @@ -74,12 +74,13 @@ test_that("the lift_master reference object is correctly generated", {
expect_equal(dim(lift_master), c(11083L, 19L))
expect_named(
lift_master,
c("SeqId", "serum_11k_to_7k_ccc", "plasma_11k_to_7k_ccc",
"serum_11k_to_5k_ccc", "plasma_11k_to_5k_ccc", "serum_11k_to_7k",
"plasma_11k_to_7k", "serum_11k_to_5k", "plasma_11k_to_5k",
"serum_5k_to_11k", "plasma_5k_to_11k", "serum_7k_to_5k_ccc",
"plasma_7k_to_5k_ccc", "serum_7k_to_5k", "plasma_7k_to_5k",
"serum_7k_to_11k", "plasma_7k_to_11k", "serum_5k_to_7k", "plasma_5k_to_7k")
c("SeqId", "plasma_11k_to_5k", "plasma_11k_to_5k_ccc",
"plasma_11k_to_7k", "plasma_11k_to_7k_ccc", "plasma_5k_to_11k",
"plasma_5k_to_7k", "plasma_7k_to_11k", "plasma_7k_to_5k",
"plasma_7k_to_5k_ccc", "serum_11k_to_5k", "serum_11k_to_5k_ccc",
"serum_11k_to_7k", "serum_11k_to_7k_ccc", "serum_5k_to_11k",
"serum_5k_to_7k", "serum_7k_to_11k", "serum_7k_to_5k",
"serum_7k_to_5k_ccc")
)
# all are SeqIds
expect_true(all(is.apt(lift_master$SeqId)))
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