About Workflow-snakemake-capture

BWA, GATK based Snakemake workflow used for DNAseq data analyses such as MyBaits capture paired-end reads or Amplicon capture single reads.

Citation

https://doi.org/10.3390/plants8100377

Authors

• Alexandre Soriano (Cirad)
• Gautier Sarah (INRAE)
• Maider Astorkia (NEIKER Tecnalia)

Thanks

Thanks to Bertrand Pitollat (AGAP Cirad) by administration support.

The authors acknowledge the AGAP HPC data center (South Green Platform) at Cirad Montpellier for providing HPC resources that have contributed to this work.

License

Licencied under GPLv3.

Intellectual property belongs to CIRAD, INRAE and the authors.