Tandem Repeats Finder is a tool
for finding tandem repeats in DNA sequences. The default output is HTML but it
also produces reports in tabular format with the -d and -ngs options.
Here are scripts to parse the tabular output and reformat them into standard formats (GFF, TSV) for downstream analyses.
Requires bedtools cluster to be in path.
For instructions run python trf_utils.py --help.