Shape to mermaid (#30)

* Add a shapeGraph to mermaid functionality
  * optional paths, nodeLinks and atLeastOneLists
  * inverse path

* Add error test + docs

* Extract label for Node Shapes from rdfs:label or IRI

* Added a simple binary for mermaid

* bump version

---------

Co-authored-by: Julian Rojas <julian.rojas87@gmail.com>
Co-authored-by: Pieter Colpaert <pieter.colpaert@ugent.be>
Co-authored-by: ajuvercr <arthur.vercruysse@outlook.com>

bin/mermaid.ts

@@ -0,0 +1,85 @@
+import { assert } from "chai";
+import { RdfStore } from "rdf-stores";
+import { ShapesGraph } from "../lib/ShapesGraph";
+import { DataFactory } from "rdf-data-factory";
+import rdfDereference from "rdf-dereference";
+import fs from "fs/promises";
+import * as process from 'process';
+import { Term } from "rdf-js";
+import { deflate} from "pako";
+import { fromUint8Array } from 'js-base64';
+
+const df = new DataFactory();
+
+
+// Check if at least one command line argument is provided
+if (process.argv.length <= 2) {
+  console.error('Please provide an IRI to a dereferenceable SHACL NodeShape or an LDES or tree:Collection with with tree:shape property in it');
+  process.exit(1); // Exit with an error code
+}
+
+let iri = process.argv[2];
+
+async function main () {
+    let df = new DataFactory();
+    let shapeStore = RdfStore.createDefault();
+    let shapesGraph: ShapesGraph;
+    let shapeTerm: Term = df.namedNode(iri);
+    let readStream = (
+      await rdfDereference.dereference(iri, {
+        localFiles: true,
+      })
+    ).data;
+
+    await new Promise((resolve, reject) => {
+      shapeStore.import(readStream).on("end", resolve).on("error", reject);
+    });
+    let tmpShapeTerm: Term[] = shapeStore.getQuads(null, df.namedNode('https://w3id.org/tree#shape'), null).map((quad) => quad.object);
+    if (tmpShapeTerm[0]) {
+        shapeTerm = tmpShapeTerm[0];
+        iri = shapeTerm.value;
+    }
+    if (tmpShapeTerm[0] && tmpShapeTerm[0].termType==='NamedNode') {
+        //Dereference the shape and add it here. The iri is not this IRI
+        console.error('GET ' + shapeTerm.value);
+        //Try to dereference this one as well. If it works, nice, if it doesn’t, too bad, we’ll continue without notice.
+        let readStream2 = (
+            await rdfDereference.dereference(shapeTerm.value, {
+              localFiles: true,
+            })
+        ).data;
+        await new Promise((resolve, reject) => {
+            shapeStore.import(readStream2).on("end", resolve).on("error", () => {
+                console.error('Warning: couldn’t fetch ' + iri + ' but continuing');
+                resolve(null);
+            });
+        });
+    }
+
+    shapesGraph = new ShapesGraph(shapeStore);
+    const actualMermaid = shapesGraph.toMermaid(shapeTerm);
+    console.log('```mermaid');
+    console.log(actualMermaid);
+    console.log('```');
+
+
+    const formatJSON = (data: unknown): string => JSON.stringify(data, undefined, 2);
+    const serialize = (state: string): string => {
+      const data = new TextEncoder().encode(state);
+      const compressed = deflate(data, { level: 9 }); // zlib level 9
+      return fromUint8Array(compressed, true); // url safe base64 encoding
+    }
+    const defaultState = {
+      code: actualMermaid,
+      mermaid: formatJSON({
+        theme: 'default'
+      }),
+      autoSync: true,
+      updateDiagram: true
+    };
+    const json = JSON.stringify(defaultState);
+    const serialized = serialize(json);
+    console.log();
+    console.log('Mermaid Live: https://mermaid.live/edit#pako:'+ serialized);
+}
+main();

lib/CBDShapeExtractor.ts

@@ -1,10 +1,11 @@
 import rdfDereference, { RdfDereferencer } from "rdf-dereference";
-import { NodeLink, RDFMap, ShapesGraph, ShapeTemplate } from "./Shape";
+import { NodeLink, RDFMap, ShapeTemplate } from "./Shape";
 import { Path, PathResult } from "./Path";
 import { DataFactory } from "rdf-data-factory";
 import { RdfStore } from "rdf-stores";
 import { Quad, Term } from "@rdfjs/types";
 import debug from "debug";
+import {ShapesGraph} from "./ShapesGraph";
 
 const log = debug("extract-cbd-shape");