From 11609763e6a2c029bfdc49d0e8ab2ae341b7a613 Mon Sep 17 00:00:00 2001 From: scopello <107278488+scopello@users.noreply.github.com> Date: Wed, 17 Jul 2024 15:24:38 +0200 Subject: [PATCH] docs: Add biorxiv link to README and leaderboard (#15) --- README.md | 18 ++++++++++++++---- leaderboard/app.py | 2 +- 2 files changed, 15 insertions(+), 5 deletions(-) diff --git a/README.md b/README.md index d6bc553..548c650 100644 --- a/README.md +++ b/README.md @@ -10,8 +10,8 @@ sdk_version: 4.36.1 GitHub release - - arXiv URL + + bioRxiv URL License @@ -176,6 +176,16 @@ DGEB follows the design of text embedding bechmark [MTEB](https://github.com/emb ## Citing -DGEB was introduced in "[Diverse Genomic Embedding Benchmark for Functional Evaluation Across the Tree of Life](https://www.tatta.bio/dgeb)", feel free to cite: +DGEB was introduced in "[Diverse Genomic Embedding Benchmark for Functional Evaluation Across the Tree of Life](https://www.biorxiv.org/content/10.1101/2024.07.10.602933v1)", feel free to cite: -TODO +``` +@article{WestRoberts2024, + title = {Diverse Genomic Embedding Benchmark for functional evaluation across the tree of life}, + url = {http://dx.doi.org/10.1101/2024.07.10.602933}, + DOI = {10.1101/2024.07.10.602933}, + publisher = {Cold Spring Harbor Laboratory}, + author = {West-Roberts, Jacob and Kravitz, Joshua and Jha, Nishant and Cornman, Andre and Hwang, Yunha}, + year = {2024}, + month = jul +} +``` diff --git a/leaderboard/app.py b/leaderboard/app.py index fea5021..47ad972 100644 --- a/leaderboard/app.py +++ b/leaderboard/app.py @@ -199,7 +199,7 @@ def task_results_to_df(model_results: List[TaskResult]) -> pd.DataFrame: gr.HTML( """
-DGEB Leaderboard. To submit, refer to the DGEB GitHub repository Refer to the DGEB paper for details on metrics, tasks, and models. +DGEB Leaderboard. To submit, refer to the DGEB GitHub repository Refer to the DGEB paper for details on metrics, tasks, and models.
""" )