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Adding new badges, bumping version to deploy to prod #13

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merged 1 commit into from
Mar 29, 2024

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@bergsalex bergsalex marked this pull request as ready for review March 29, 2024 13:49
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Test Coverage Report

============================= test session starts ==============================
platform linux -- Python 3.11.8, pytest-7.4.4, pluggy-1.4.0
rootdir: /home/runner/work/geneweaver-aon/geneweaver-aon
plugins: anyio-4.3.0, cov-4.1.0
collected 46 items

tests/test_common.py ..............................................      [100%]

---------- coverage: platform linux, python 3.11.8-final-0 -----------
Name                                                               Stmts   Miss  Cover
--------------------------------------------------------------------------------------
src/geneweaver/aon/__init__.py                                         5      2    60%
src/geneweaver/aon/alembic/__init__.py                                 0      0   100%
src/geneweaver/aon/alembic/env.py                                     34     34     0%
src/geneweaver/aon/alembic/versions/4297df5638d7_first_commit.py      17     17     0%
src/geneweaver/aon/alembic/versions/666568a64356_.py                  20     20     0%
src/geneweaver/aon/alembic/versions/__init__.py                        0      0   100%
src/geneweaver/aon/api.py                                             17     17     0%
src/geneweaver/aon/cli/__init__.py                                     0      0   100%
src/geneweaver/aon/cli/load.py                                       141    141     0%
src/geneweaver/aon/cli/main.py                                        14     14     0%
src/geneweaver/aon/cli/setup.py                                       18     18     0%
src/geneweaver/aon/cli/temporal.py                                    48     48     0%
src/geneweaver/aon/controller/__init__.py                              0      0   100%
src/geneweaver/aon/controller/algorithms.py                           13     13     0%
src/geneweaver/aon/controller/genes.py                                21     21     0%
src/geneweaver/aon/controller/homologs.py                             20     20     0%
src/geneweaver/aon/controller/orthologs.py                            23     23     0%
src/geneweaver/aon/controller/species.py                              31     31     0%
src/geneweaver/aon/controller/versions.py                             10     10     0%
src/geneweaver/aon/core/__init__.py                                    0      0   100%
src/geneweaver/aon/core/config.py                                      2      2     0%
src/geneweaver/aon/core/config_class.py                               48     48     0%
src/geneweaver/aon/core/database.py                                   15     15     0%
src/geneweaver/aon/core/schema_version.py                             52     52     0%
src/geneweaver/aon/dependencies.py                                    49     49     0%
src/geneweaver/aon/enum.py                                             7      7     0%
src/geneweaver/aon/load/__init__.py                                    0      0   100%
src/geneweaver/aon/load/agr/__init__.py                                1      1     0%
src/geneweaver/aon/load/agr/load.py                                  167    167     0%
src/geneweaver/aon/load/agr/sources.py                                29     29     0%
src/geneweaver/aon/load/geneweaver/__init__.py                         1      1     0%
src/geneweaver/aon/load/geneweaver/genes.py                           30     30     0%
src/geneweaver/aon/load/geneweaver/homologs.py                        65     65     0%
src/geneweaver/aon/models.py                                          79     79     0%
src/geneweaver/aon/service/__init__.py                                 0      0   100%
src/geneweaver/aon/service/algorithms.py                               9      9     0%
src/geneweaver/aon/service/convert.py                                 49     49     0%
src/geneweaver/aon/service/genes.py                                   23     23     0%
src/geneweaver/aon/service/homologs.py                                19     19     0%
src/geneweaver/aon/service/orthologs.py                               38     38     0%
src/geneweaver/aon/service/species.py                                 22     22     0%
src/geneweaver/aon/service/utils.py                                    8      8     0%
src/geneweaver/aon/temporal/__init__.py                                0      0   100%
src/geneweaver/aon/temporal/activities/__init__.py                     0      0   100%
src/geneweaver/aon/temporal/activities/download_source.py             24     24     0%
src/geneweaver/aon/temporal/load_data_workflow.py                     22     22     0%
src/geneweaver/aon/temporal/worker.py                                 12     12     0%
--------------------------------------------------------------------------------------
TOTAL                                                               1203   1200     1%
Coverage HTML written to dir htmlcov


============================== 46 passed in 1.30s ==============================

@bergsalex bergsalex temporarily deployed to jax-cluster-dev-10--dev March 29, 2024 13:52 — with GitHub Actions Inactive
@bergsalex bergsalex merged commit 2bc2e7f into main Mar 29, 2024
7 checks passed
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