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v2.3.3

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@TimD1 TimD1 released this 09 Feb 16:17
· 41 commits to master since this release
v2.3.3
df4c972

Minor updates

  • started the vcfdist wiki, which is currently a work-in-progress
  • added THRESHOLD column to precision-recall-summary.tsv, containing either NONE or BEST
  • added make install command
  • added new size-based clustering heuristic, explained in wiki
  • added evaluating ALL variants to to stdout and precision-recall.tsv
  • added RD and QD tags to summary.vcf, listing reference and query distances from truth sequence
  • added REF_DIST and QUERY_DIST columns to query.tsv and truth.tsv containing the same info

Minor bugfixes

  • fixed precision-recall-summary.tsv extra tab
  • added Makefile comment that libstdc++fs inclusion depends on GCC version
  • fixed off-by-one error that miscounted TRUTH_TP and TRUTH_FN (at g.max_qual only)
  • fixed segfault when no variants are present
  • FORMAT/BC tag in summary.vcf is now Float (not String)
  • fixed credit being set to 0.0 for all FP query variants below --credit-threshold
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