diff --git a/poetry.lock b/poetry.lock
index 3cf65d4..8c81c45 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -13,13 +13,13 @@ files = [
 
 [[package]]
 name = "astroid"
-version = "3.0.3"
+version = "3.1.0"
 description = "An abstract syntax tree for Python with inference support."
 optional = false
 python-versions = ">=3.8.0"
 files = [
-    {file = "astroid-3.0.3-py3-none-any.whl", hash = "sha256:92fcf218b89f449cdf9f7b39a269f8d5d617b27be68434912e11e79203963a17"},
-    {file = "astroid-3.0.3.tar.gz", hash = "sha256:4148645659b08b70d72460ed1921158027a9e53ae8b7234149b1400eddacbb93"},
+    {file = "astroid-3.1.0-py3-none-any.whl", hash = "sha256:951798f922990137ac090c53af473db7ab4e70c770e6d7fae0cec59f74411819"},
+    {file = "astroid-3.1.0.tar.gz", hash = "sha256:ac248253bfa4bd924a0de213707e7ebeeb3138abeb48d798784ead1e56d419d4"},
 ]
 
 [[package]]
@@ -349,13 +349,13 @@ tomli = ["tomli (>=2.0.0,<3.0.0)"]
 
 [[package]]
 name = "faker"
-version = "23.2.1"
+version = "23.3.0"
 description = "Faker is a Python package that generates fake data for you."
 optional = false
 python-versions = ">=3.8"
 files = [
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-    {file = "Faker-23.2.1.tar.gz", hash = "sha256:f07b64d27f67b62c7f0536a72f47813015b3b51cd4664918454011094321e464"},
+    {file = "Faker-23.3.0-py3-none-any.whl", hash = "sha256:117ce1a2805c1bc5ca753b3dc6f9d567732893b2294b827d3164261ee8f20267"},
+    {file = "Faker-23.3.0.tar.gz", hash = "sha256:458d93580de34403a8dec1e8d5e6be2fee96c4deca63b95d71df7a6a80a690de"},
 ]
 
 [package.dependencies]
@@ -396,12 +396,13 @@ typing = ["typing-extensions (>=4.8)"]
 
 [[package]]
 name = "future"
-version = "0.18.3"
+version = "1.0.0"
 description = "Clean single-source support for Python 3 and 2"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
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+    {file = "future-1.0.0-py3-none-any.whl", hash = "sha256:929292d34f5872e70396626ef385ec22355a1fae8ad29e1a734c3e43f9fbc216"},
+    {file = "future-1.0.0.tar.gz", hash = "sha256:bd2968309307861edae1458a4f8a4f3598c03be43b97521076aebf5d94c07b05"},
 ]
 
 [[package]]
@@ -654,18 +655,18 @@ virtualenv = ">=20.10.0"
 
 [[package]]
 name = "pydantic"
-version = "2.6.1"
+version = "2.6.3"
 description = "Data validation using Python type hints"
 optional = false
 python-versions = ">=3.8"
 files = [
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-    {file = "pydantic-2.6.1.tar.gz", hash = "sha256:4fd5c182a2488dc63e6d32737ff19937888001e2a6d86e94b3f233104a5d1fa9"},
+    {file = "pydantic-2.6.3-py3-none-any.whl", hash = "sha256:72c6034df47f46ccdf81869fddb81aade68056003900a8724a4f160700016a2a"},
+    {file = "pydantic-2.6.3.tar.gz", hash = "sha256:e07805c4c7f5c6826e33a1d4c9d47950d7eaf34868e2690f8594d2e30241f11f"},
 ]
 
 [package.dependencies]
 annotated-types = ">=0.4.0"
-pydantic-core = "2.16.2"
+pydantic-core = "2.16.3"
 typing-extensions = ">=4.6.1"
 
 [package.extras]
@@ -673,90 +674,90 @@ email = ["email-validator (>=2.0.0)"]
 
 [[package]]
 name = "pydantic-core"
-version = "2.16.2"
+version = "2.16.3"
 description = ""
 optional = false
 python-versions = ">=3.8"
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@@ -779,17 +780,17 @@ windows-terminal = ["colorama (>=0.4.6)"]
 
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-    {file = "pylint-3.0.3.tar.gz", hash = "sha256:58c2398b0301e049609a8429789ec6edf3aabe9b6c5fec916acd18639c16de8b"},
+    {file = "pylint-3.1.0-py3-none-any.whl", hash = "sha256:507a5b60953874766d8a366e8e8c7af63e058b26345cfcb5f91f89d987fd6b74"},
+    {file = "pylint-3.1.0.tar.gz", hash = "sha256:6a69beb4a6f63debebaab0a3477ecd0f559aa726af4954fc948c51f7a2549e23"},
 ]
 
 [package.dependencies]
-astroid = ">=3.0.1,<=3.1.0-dev0"
+astroid = ">=3.1.0,<=3.2.0-dev0"
 colorama = {version = ">=0.4.5", markers = "sys_platform == \"win32\""}
 dill = [
     {version = ">=0.3.7", markers = "python_version >= \"3.12\""},
@@ -806,23 +807,23 @@ testutils = ["gitpython (>3)"]
 
 [[package]]
 name = "pytest"
-version = "8.0.1"
+version = "8.1.0"
 description = "pytest: simple powerful testing with Python"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "pytest-8.0.1-py3-none-any.whl", hash = "sha256:3e4f16fe1c0a9dc9d9389161c127c3edc5d810c38d6793042fb81d9f48a59fca"},
-    {file = "pytest-8.0.1.tar.gz", hash = "sha256:267f6563751877d772019b13aacbe4e860d73fe8f651f28112e9ac37de7513ae"},
+    {file = "pytest-8.1.0-py3-none-any.whl", hash = "sha256:ee32db7af8de4629a455806befa90559f307424c07b8413ccfc30bf5b221dd7e"},
+    {file = "pytest-8.1.0.tar.gz", hash = "sha256:f8fa04ab8f98d185113ae60ea6d79c22f8143b14bc1caeced44a0ab844928323"},
 ]
 
 [package.dependencies]
 colorama = {version = "*", markers = "sys_platform == \"win32\""}
 iniconfig = "*"
 packaging = "*"
-pluggy = ">=1.3.0,<2.0"
+pluggy = ">=1.4,<2.0"
 
 [package.extras]
-testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "nose", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"]
+testing = ["argcomplete", "attrs (>=19.2)", "hypothesis (>=3.56)", "mock", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"]
 
 [[package]]
 name = "pytest-repeat"
@@ -840,13 +841,13 @@ pytest = "*"
 
 [[package]]
 name = "python-dateutil"
-version = "2.8.2"
+version = "2.9.0.post0"
 description = "Extensions to the standard Python datetime module"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
 files = [
-    {file = "python-dateutil-2.8.2.tar.gz", hash = "sha256:0123cacc1627ae19ddf3c27a5de5bd67ee4586fbdd6440d9748f8abb483d3e86"},
-    {file = "python_dateutil-2.8.2-py2.py3-none-any.whl", hash = "sha256:961d03dc3453ebbc59dbdea9e4e11c5651520a876d0f4db161e8674aae935da9"},
+    {file = "python-dateutil-2.9.0.post0.tar.gz", hash = "sha256:37dd54208da7e1cd875388217d5e00ebd4179249f90fb72437e91a35459a0ad3"},
+    {file = "python_dateutil-2.9.0.post0-py2.py3-none-any.whl", hash = "sha256:a8b2bc7bffae282281c8140a97d3aa9c14da0b136dfe83f850eea9a5f7470427"},
 ]
 
 [package.dependencies]
@@ -914,13 +915,13 @@ files = [
 
 [[package]]
 name = "rich"
-version = "13.7.0"
+version = "13.7.1"
 description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal"
 optional = false
 python-versions = ">=3.7.0"
 files = [
-    {file = "rich-13.7.0-py3-none-any.whl", hash = "sha256:6da14c108c4866ee9520bbffa71f6fe3962e193b7da68720583850cd4548e235"},
-    {file = "rich-13.7.0.tar.gz", hash = "sha256:5cb5123b5cf9ee70584244246816e9114227e0b98ad9176eede6ad54bf5403fa"},
+    {file = "rich-13.7.1-py3-none-any.whl", hash = "sha256:4edbae314f59eb482f54e9e30bf00d33350aaa94f4bfcd4e9e3110e64d0d7222"},
+    {file = "rich-13.7.1.tar.gz", hash = "sha256:9be308cb1fe2f1f57d67ce99e95af38a1e2bc71ad9813b0e247cf7ffbcc3a432"},
 ]
 
 [package.dependencies]
@@ -991,19 +992,19 @@ files = [
 
 [[package]]
 name = "setuptools"
-version = "69.1.0"
+version = "69.1.1"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "setuptools-69.1.0-py3-none-any.whl", hash = "sha256:c054629b81b946d63a9c6e732bc8b2513a7c3ea645f11d0139a2191d735c60c6"},
-    {file = "setuptools-69.1.0.tar.gz", hash = "sha256:850894c4195f09c4ed30dba56213bf7c3f21d86ed6bdaafb5df5972593bfc401"},
+    {file = "setuptools-69.1.1-py3-none-any.whl", hash = "sha256:02fa291a0471b3a18b2b2481ed902af520c69e8ae0919c13da936542754b4c56"},
+    {file = "setuptools-69.1.1.tar.gz", hash = "sha256:5c0806c7d9af348e6dd3777b4f4dbb42c7ad85b190104837488eab9a7c945cf8"},
 ]
 
 [package.extras]
 docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (>=1,<2)", "sphinx-reredirects", "sphinxcontrib-towncrier"]
-testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pip (>=19.1)", "pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-home (>=0.5)", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-ruff (>=0.2.1)", "pytest-timeout", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
-testing-integration = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "packaging (>=23.1)", "pytest", "pytest-enabler", "pytest-xdist", "tomli", "virtualenv (>=13.0.0)", "wheel"]
+testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "packaging (>=23.2)", "pip (>=19.1)", "pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-home (>=0.5)", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-ruff (>=0.2.1)", "pytest-timeout", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
+testing-integration = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "packaging (>=23.2)", "pytest", "pytest-enabler", "pytest-xdist", "tomli", "virtualenv (>=13.0.0)", "wheel"]
 
 [[package]]
 name = "six"
@@ -1018,13 +1019,13 @@ files = [
 
 [[package]]
 name = "stevedore"
-version = "5.1.0"
+version = "5.2.0"
 description = "Manage dynamic plugins for Python applications"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "stevedore-5.1.0-py3-none-any.whl", hash = "sha256:8cc040628f3cea5d7128f2e76cf486b2251a4e543c7b938f58d9a377f6694a2d"},
-    {file = "stevedore-5.1.0.tar.gz", hash = "sha256:a54534acf9b89bc7ed264807013b505bf07f74dbe4bcfa37d32bd063870b087c"},
+    {file = "stevedore-5.2.0-py3-none-any.whl", hash = "sha256:1c15d95766ca0569cad14cb6272d4d31dae66b011a929d7c18219c176ea1b5c9"},
+    {file = "stevedore-5.2.0.tar.gz", hash = "sha256:46b93ca40e1114cea93d738a6c1e365396981bb6bb78c27045b7587c9473544d"},
 ]
 
 [package.dependencies]
@@ -1032,24 +1033,24 @@ pbr = ">=2.0.0,<2.1.0 || >2.1.0"
 
 [[package]]
 name = "tomlkit"
-version = "0.12.3"
+version = "0.12.4"
 description = "Style preserving TOML library"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "tomlkit-0.12.3-py3-none-any.whl", hash = "sha256:b0a645a9156dc7cb5d3a1f0d4bab66db287fcb8e0430bdd4664a095ea16414ba"},
-    {file = "tomlkit-0.12.3.tar.gz", hash = "sha256:75baf5012d06501f07bee5bf8e801b9f343e7aac5a92581f20f80ce632e6b5a4"},
+    {file = "tomlkit-0.12.4-py3-none-any.whl", hash = "sha256:5cd82d48a3dd89dee1f9d64420aa20ae65cfbd00668d6f094d7578a78efbb77b"},
+    {file = "tomlkit-0.12.4.tar.gz", hash = "sha256:7ca1cfc12232806517a8515047ba66a19369e71edf2439d0f5824f91032b6cc3"},
 ]
 
 [[package]]
 name = "types-docutils"
-version = "0.20.0.20240201"
+version = "0.20.0.20240303"
 description = "Typing stubs for docutils"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "types-docutils-0.20.0.20240201.tar.gz", hash = "sha256:ba4bfd4ff6dd19640ba7ab5d93900393a65897880f3650997964a943f4e79a6b"},
-    {file = "types_docutils-0.20.0.20240201-py3-none-any.whl", hash = "sha256:79d3bcef235f7c81a63f4f3dcf1d0b138985079bb32d02f5a7d266e1f9f361ba"},
+    {file = "types-docutils-0.20.0.20240303.tar.gz", hash = "sha256:c44500d25ca0788a580d70622a0d9dcb450e3783c04baa7e7b3300b054d7afdc"},
+    {file = "types_docutils-0.20.0.20240303-py3-none-any.whl", hash = "sha256:1f6eeff6fabf44666636c02d17ccff8c4c8cd466d8de727bbcfa1b488615adac"},
 ]
 
 [[package]]
@@ -1069,24 +1070,24 @@ types-setuptools = "*"
 
 [[package]]
 name = "types-setuptools"
-version = "69.1.0.20240217"
+version = "69.1.0.20240302"
 description = "Typing stubs for setuptools"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "types-setuptools-69.1.0.20240217.tar.gz", hash = "sha256:243fecc8850b6f7fbfa84bab18ec93407046a4e91130056fd5a7caef971aaff9"},
-    {file = "types_setuptools-69.1.0.20240217-py3-none-any.whl", hash = "sha256:8b60e14a652b48bda292801c5a0c1251c190ad587c295f7839e901634913bb96"},
+    {file = "types-setuptools-69.1.0.20240302.tar.gz", hash = "sha256:ed5462cf8470831d1bdbf300e1eeea876040643bfc40b785109a5857fa7d3c3f"},
+    {file = "types_setuptools-69.1.0.20240302-py3-none-any.whl", hash = "sha256:99c1053920a6fa542b734c9ad61849c3993062f80963a4034771626528e192a0"},
 ]
 
 [[package]]
 name = "typing-extensions"
-version = "4.9.0"
+version = "4.10.0"
 description = "Backported and Experimental Type Hints for Python 3.8+"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "typing_extensions-4.9.0-py3-none-any.whl", hash = "sha256:af72aea155e91adfc61c3ae9e0e342dbc0cba726d6cba4b6c72c1f34e47291cd"},
-    {file = "typing_extensions-4.9.0.tar.gz", hash = "sha256:23478f88c37f27d76ac8aee6c905017a143b0b1b886c3c9f66bc2fd94f9f5783"},
+    {file = "typing_extensions-4.10.0-py3-none-any.whl", hash = "sha256:69b1a937c3a517342112fb4c6df7e72fc39a38e7891a5730ed4985b5214b5475"},
+    {file = "typing_extensions-4.10.0.tar.gz", hash = "sha256:b0abd7c89e8fb96f98db18d86106ff1d90ab692004eb746cf6eda2682f91b3cb"},
 ]
 
 [[package]]
@@ -1101,13 +1102,13 @@ files = [
 
 [[package]]
 name = "virtualenv"
-version = "20.25.0"
+version = "20.25.1"
 description = "Virtual Python Environment builder"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "virtualenv-20.25.0-py3-none-any.whl", hash = "sha256:4238949c5ffe6876362d9c0180fc6c3a824a7b12b80604eeb8085f2ed7460de3"},
-    {file = "virtualenv-20.25.0.tar.gz", hash = "sha256:bf51c0d9c7dd63ea8e44086fa1e4fb1093a31e963b86959257378aef020e1f1b"},
+    {file = "virtualenv-20.25.1-py3-none-any.whl", hash = "sha256:961c026ac520bac5f69acb8ea063e8a4f071bcc9457b9c1f28f6b085c511583a"},
+    {file = "virtualenv-20.25.1.tar.gz", hash = "sha256:e08e13ecdca7a0bd53798f356d5831434afa5b07b93f0abdf0797b7a06ffe197"},
 ]
 
 [package.dependencies]
diff --git a/pyproject.toml b/pyproject.toml
index 4f54570..76d2c17 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -34,10 +34,7 @@ homepage = "https://github.com/TimeTravelPenguin/BulkAudioExtractTool"
 repository = "https://github.com/TimeTravelPenguin/BulkAudioExtractTool"
 
 [tool.poetry.scripts]
-# baet = "BAET.__main__:main"
-# cli = "BAET.cli.cli:test"
-baet = "BAET.cli.cli:cli"
-debug = "BAET.cli.__main__:debug"
+baet = "BAET.__main__:main"
 
 [tool.poetry.dependencies]
 python = ">=3.11,<4.0.0"
diff --git a/ruff.toml b/ruff.toml
index 86908bc..93bae23 100644
--- a/ruff.toml
+++ b/ruff.toml
@@ -3,6 +3,9 @@ line-length = 120
 src = ["src", "tests"]
 fix = true
 
+[format]
+docstring-code-format = true
+
 [lint]
 extend-select = [
    "F", "I", "E", "W", "I", "D", "S", "G", "C4",
diff --git a/src/BAET/__main__.py b/src/BAET/__main__.py
index 9e6dcb1..2e8a2e2 100644
--- a/src/BAET/__main__.py
+++ b/src/BAET/__main__.py
@@ -1,43 +1,16 @@
 """Bulk Audio Export Tool (BAET) is a command line tool for exporting audio tracks from video files in bulk."""
 
 import sys
-from datetime import datetime
-from pathlib import Path
 
-import rich
-from rich.live import Live
 from rich.traceback import install
 
-from . import app_console, configure_logging, create_logger
-from .app_args import get_args
-from .FFmpeg.extract import MultiTrackAudioBulkExtractor
+from BAET.cli.cli import cli
 
+# Enable rich traceback
 install(show_locals=True)
 
 
 def main() -> None:
     """Entry point for BAET."""
-    args = get_args()
-
-    if args.debug_options.print_args:
-        rich.print(args)
-        sys.exit(0)
-
-    if args.debug_options.logging:
-        log_path = Path("~/.baet").expanduser()
-        log_path.mkdir(parents=True, exist_ok=True)
-        log_file = log_path / f"logs_{datetime.now()}.txt"
-        log_file.touch()
-
-        configure_logging(enable_logging=True, file_out=log_file)
-    else:
-        configure_logging(enable_logging=False, file_out=None)
-
-    logger = create_logger()
-    extractor = MultiTrackAudioBulkExtractor(args)
-
-    with Live(extractor, console=app_console):
-        logger.info("Running jobs")
-        extractor.run_synchronously()
-
+    cli()
     sys.exit(0)
diff --git a/src/BAET/app_args.py b/src/BAET/app_args.py
deleted file mode 100644
index b1de6f2..0000000
--- a/src/BAET/app_args.py
+++ /dev/null
@@ -1,363 +0,0 @@
-"""Application commandline arguments."""
-
-import argparse
-import re
-from argparse import ArgumentParser
-from pathlib import Path
-from re import Pattern
-from typing import Annotated
-
-from pydantic import BaseModel, ConfigDict, DirectoryPath, Field, field_validator
-from rich.console import Console, ConsoleOptions, RenderResult
-from rich.markdown import Markdown
-from rich.padding import Padding
-from rich.table import Table
-from rich.terminal_theme import DIMMED_MONOKAI
-from rich.text import Text
-from rich_argparse import HelpPreviewAction, RichHelpFormatter
-
-from . import __version__
-from ._config.console import app_console
-from ._config.ffmpeg_version import ffmpeg_version_info
-
-file_type_pattern = re.compile(r"^\.?(\w+)$")
-
-
-class InputFilters(BaseModel):
-    """Input filters for files to process."""
-
-    include: Pattern[str] = Field(...)
-    exclude: Pattern[str] | None = Field(...)
-
-    @field_validator("include", mode="before")
-    @classmethod
-    def validate_include_nonempty(cls, v: str) -> Pattern[str]:
-        """Validate the include pattern is not empty."""
-        if v is None or not v.strip():
-            return re.compile(".*")
-        return re.compile(v)
-
-    @field_validator("exclude", mode="before")
-    @classmethod
-    def validate_exclude_nonempty(cls, v: str) -> Pattern[str] | None:
-        """Validate the exclude pattern is not empty."""
-        if v is None or not v.strip():
-            return None
-        return re.compile(v)
-
-
-class OutputConfigurationOptions(BaseModel):
-    """Output configuration options."""
-
-    overwrite_existing: bool = Field(...)
-    no_output_subdirs: bool = Field(...)
-    acodec: str = Field(...)
-    fallback_sample_rate: Annotated[int, Field(gt=0)] = Field(...)
-    file_type: str = Field(...)
-
-    @field_validator("file_type", mode="before")
-    @classmethod
-    def validate_file_type(cls, v: str) -> str:
-        """Validate the file type."""
-        matched = file_type_pattern.match(v)
-        if matched:
-            return matched.group(1)
-        raise ValueError(f"Invalid file type: {v}")
-
-
-class DebugOptions(BaseModel):
-    """Debugging options."""
-
-    logging: bool = Field(...)
-    dry_run: bool = Field(...)
-    trim: Annotated[int, Field(gt=0)] | None = Field(...)
-    print_args: bool = Field(...)
-    show_ffmpeg_cmd: bool = Field(...)
-    run_synchronously: bool = Field(...)
-
-
-class AppDescription:
-    """Application description."""
-
-    @staticmethod
-    def __rich_console__(console: Console, options: ConsoleOptions) -> RenderResult:
-        """Render the application description."""
-        yield Padding(Markdown("# Bulk Audio Extract Tool"), pad=(1, 0))
-        yield "Extract audio from a directory of videos using FFMPEG.\n"
-
-        website_link = "https://github.com/TimeTravelPenguin/BulkAudioExtractTool"
-        desc_kvps = [
-            (
-                Text("App name:", justify="right"),
-                Text(
-                    "Bulk Audio Extract Tool (BAET)",
-                    style="argparse.prog",
-                    justify="left",
-                ),
-            ),
-            (
-                Text("App Version:", justify="right"),
-                Text(__version__, style="app.version", justify="left"),
-            ),
-            (
-                Text("FFmpeg Version:", justify="right"),
-                Text(ffmpeg_version_info.version, style="app.version", justify="left"),
-            ),
-            (
-                Text("Author:", justify="right"),
-                Text("Phillip Smith", style="bright_yellow", justify="left"),
-            ),
-            (
-                Text("Website:", justify="right"),
-                Text(
-                    website_link,
-                    style=f"underline blue link {website_link}",
-                    justify="left",
-                ),
-            ),
-        ]
-
-        grid = Table.grid(expand=True)
-        grid.add_column(justify="left")
-        grid.add_column(justify="right")
-        for key, value in desc_kvps:
-            grid.add_row(Padding(key, (0, 3, 0, 0)), value)
-
-        yield grid
-
-
-def new_empty_argparser() -> ArgumentParser:
-    """Create a new empty argument parser."""
-
-    def get_formatter(prog: str) -> RichHelpFormatter:
-        return RichHelpFormatter(prog, max_help_position=40, console=app_console)
-
-    # todo: use console protocol https://rich.readthedocs.io/en/stable/protocol.html#console-protocol
-    description = AppDescription()
-
-    RichHelpFormatter.highlights.append(
-        r"(?P<arg_default_parens>\((?P<arg_default>Default: (?P<arg_default_value>.*))\))"
-    )
-
-    RichHelpFormatter.highlights.append(r"(?P<help_keyword>ffmpeg|ffprobe)")
-    RichHelpFormatter.highlights.append(r"(?P<debug_todo>\[TODO\])")
-
-    epilog = Markdown(
-        "Phillip Smith, 2024",
-        justify="right",
-        style="argparse.prog",
-    )
-
-    return argparse.ArgumentParser(
-        prog="Bulk Audio Extract Tool (src)",
-        description=description,  # type: ignore
-        epilog=epilog,  # type: ignore
-        formatter_class=get_formatter,
-    )
-
-
-class AppArgs(BaseModel):
-    """Application commandline arguments."""
-
-    model_config = ConfigDict(frozen=True, from_attributes=True)
-
-    input_dir: DirectoryPath = Field(...)
-    output_dir: DirectoryPath = Field(...)
-    input_filters: InputFilters = Field(...)
-    output_configuration: OutputConfigurationOptions = Field(...)
-    debug_options: DebugOptions = Field(...)
-
-
-def get_args() -> AppArgs:
-    """Get the application arguments."""
-    parser = new_empty_argparser()
-
-    parser.add_argument(
-        "--version",
-        action="version",
-        version=f"[argparse.prog]%(prog)s[/] version [i]{__version__}[/]",
-    )
-
-    io_group = parser.add_argument_group(
-        "Input/Output",
-        "Options to control the source and destination directories of input and output files.",
-    )
-
-    io_group.add_argument(
-        "-i",
-        "--input-dir",
-        action="store",
-        type=DirectoryPath,
-        metavar="INPUT_DIR",
-        required=True,
-        help="Source directory.",
-    )
-
-    io_group.add_argument(
-        "-o",
-        "--output-dir",
-        default=None,
-        action="store",
-        type=Path,
-        help="Destination directory. Default is set to the input directory. To use the current directory, "
-        'use [blue]"."[/]. (Default: None)',
-    )
-
-    query_group = parser.add_argument_group(
-        title="Input Filter Configuration",
-        description="Configure how the application includes and excludes files to process.",
-    )
-
-    query_group.add_argument(
-        "--include",
-        default=None,
-        metavar="REGEX",
-        help='[TODO] If provided, only include files that match a regex pattern. (Default: ".*")',
-    )
-
-    query_group.add_argument(
-        "--exclude",
-        default=None,
-        metavar="REGEX",
-        help="[TODO] If provided, exclude files that match a regex pattern. (Default: None)",
-    )
-
-    output_group = parser.add_argument_group(
-        title="Output Configuration",
-        description="Override the default output behavior of the application.",
-    )
-
-    output_group.add_argument(
-        "--overwrite-existing",
-        "--overwrite",
-        default=False,
-        action="store_true",
-        help="Overwrite a file if it already exists. (Default: False)",
-    )
-
-    output_group.add_argument(
-        "--no-output-subdirs",
-        default=False,
-        action="store_true",
-        help="Do not create subdirectories for each video's extracted audio tracks in the output directory. "
-        "(Default: True)",
-    )
-
-    output_group.add_argument(
-        "--acodec",
-        default="pcm_s16le",
-        metavar="CODEC",
-        help='[TODO] The audio codec to use when extracting audio. (Default: "pcm_s16le")',
-    )
-
-    output_group.add_argument(
-        "--fallback-sample-rate",
-        default=48000,
-        metavar="RATE",
-        help="[TODO] The sample rate to use if it cannot be determined via [blue]ffprobe[/]. (Default: 48000)",
-    )
-
-    output_group.add_argument(
-        "--file-type",
-        default="wav",
-        metavar="EXT",
-        help='[TODO] The file type to use for the extracted audio. (Default: "wav")',
-    )
-
-    debug_group = parser.add_argument_group(
-        "Debugging",
-        "Options to help debug the application.",
-    )
-
-    debug_group.add_argument(
-        "--run-synchronously",
-        "--sync",
-        default=False,
-        action="store_true",
-        help="[TODO] Run each each job in order. This should reduce the CPU workload, but may increase runtime. A "
-        "'job' is per file input, regardless of whether ffmpeg commands are merged (see: "
-        "`--output-streams-separately`). (Default: False)",
-    )
-
-    debug_group.add_argument(
-        "--logging",
-        default=False,
-        action="store_true",
-        help="[TODO] Show the logging of application execution. (Default: False)",
-    )
-
-    debug_group.add_argument(
-        "--print-args",
-        default=False,
-        action="store_true",
-        help="Print the parsed arguments and exit. (Default: False)",
-    )
-
-    debug_group.add_argument(
-        "--dry-run",
-        default=False,
-        action="store_true",
-        help="Run the program without actually extracting any audio. (Default: False)",
-    )
-
-    debug_group.add_argument(
-        "--show-ffmpeg-cmd",
-        "--cmds",
-        default=False,
-        action="store_true",
-        help="[TODO] Print to the console the generated ffmpeg command. (Default: False)",
-    )
-
-    debug_group.add_argument(
-        "--trim-short",
-        default=None,
-        type=int,
-        dest="trim",
-        help="[TODO] Trim the audio to the specified number of seconds. This is useful for testing. (Default: None)",
-    )
-
-    parser.add_argument(
-        "--generate-help-preview",
-        action=HelpPreviewAction,
-        path="help-preview.svg",  # (optional) or "help-preview.html" or "help-preview.txt"
-        export_kwds={"theme": DIMMED_MONOKAI},  # (optional) keywords passed to console.save_... methods
-        help=argparse.SUPPRESS,
-    )
-
-    args = parser.parse_args()
-
-    input_filters = InputFilters(include=args.include, exclude=args.exclude)
-
-    output_config = OutputConfigurationOptions(
-        overwrite_existing=args.overwrite_existing,
-        no_output_subdirs=args.no_output_subdirs,
-        acodec=args.acodec,
-        fallback_sample_rate=args.fallback_sample_rate,
-        file_type=args.file_type,
-    )
-
-    debug_options = DebugOptions(
-        logging=args.logging,
-        dry_run=args.dry_run,
-        trim=args.trim,
-        print_args=args.print_args,
-        show_ffmpeg_cmd=args.show_ffmpeg_cmd,
-        run_synchronously=args.run_synchronously,
-    )
-
-    output_dir = args.output_dir or args.input_dir
-    output_dir = output_dir.expanduser()
-    output_dir.mkdir(parents=True, exist_ok=True)
-
-    app_args: AppArgs = AppArgs.model_validate(
-        {
-            "input_dir": args.input_dir.expanduser(),
-            "output_dir": output_dir,
-            "input_filters": input_filters,
-            "output_configuration": output_config,
-            "debug_options": debug_options,
-        },
-        strict=True,
-    )
-
-    return app_args
diff --git a/src/BAET/cli/cli.py b/src/BAET/cli/cli.py
index 1df57d2..76f6af9 100644
--- a/src/BAET/cli/cli.py
+++ b/src/BAET/cli/cli.py
@@ -1,7 +1,5 @@
 """Application commandline interface."""
 
-import re
-
 import rich_click as click
 
 from BAET._config.logging import app_logger, configure_logging, create_logger
@@ -11,8 +9,6 @@
 
 logger = create_logger()
 
-file_type_pattern = re.compile(r"^\.?(\w+)$")
-
 
 @click.group("baet")
 @baet_config(use_markdown=True)
@@ -34,8 +30,3 @@ def cli(logging: int) -> None:
 
 cli.add_command(extract.extract)
 cli.add_command(probe.probe)
-
-
-def test() -> None:
-    """Test the CLI."""
-    cli()
diff --git a/src/BAET/cli/commands/extract.py b/src/BAET/cli/commands/extract.py
index 5ca59bf..9d794ab 100644
--- a/src/BAET/cli/commands/extract.py
+++ b/src/BAET/cli/commands/extract.py
@@ -80,14 +80,6 @@ def _processor(job: ExtractJob) -> ExtractJob:
 @baet_config()
 def extract(dry_run: bool, overwrite: bool) -> None:
     """Extract click command."""
-    if not overwrite:
-        app_console.print(
-            "[bold red]This application is currently still in development.",
-            "[bold red]Any generated files will overwrite existing files with the same name.",
-            end="\n\n",
-        )
-
-        click.confirm("Do you want to continue?", abort=True)
 
 
 @extract.result_callback()
@@ -99,6 +91,15 @@ def process(
     overwrite: bool,
 ) -> None:
     """Process the extract command."""
+    if not overwrite:
+        app_console.print(
+            "[bold red]This application is currently still in development.",
+            "[bold red]Any generated files will overwrite existing files with the same name.",
+            end="\n\n",
+        )
+
+        click.confirm("Do you want to continue?", abort=True)
+
     logger.info("Dry run: %s", dry_run)
 
     job: ExtractJob = ExtractJob()
diff --git a/src/BAET/debug/__main__.py b/src/BAET/debug/__main__.py
deleted file mode 100644
index fabaf62..0000000
--- a/src/BAET/debug/__main__.py
+++ /dev/null
@@ -1,5 +0,0 @@
-"""Debugging entry point for BAET."""
-
-from ..cli.cli import cli
-
-cli()
diff --git a/src/BAET/helpers/string_helpers.py b/src/BAET/helpers/string_helpers.py
index 6708915..9d57360 100644
--- a/src/BAET/helpers/string_helpers.py
+++ b/src/BAET/helpers/string_helpers.py
@@ -12,9 +12,36 @@ def pretty_join[T](
     formatter: Callable[[T], str] | None = None,
     force_newline: bool = False,
 ) -> str:
-    """Join items with a separator and a message.
+    """Join a sequence of items into a pretty list string.
 
-    Multiple items will appear on new lines.
+    Parameters
+    ----------
+    items : Sequence[T]
+        A sequence of strings to join.
+
+    message : str
+        The message to prepend to the list.
+
+    bullet : str
+        The bullet to use for each item.
+
+    formatter : Callable[[T], str], optional
+        A function to format each item. If None, then no formatter will be used.
+
+    force_newline : bool
+        If True, then a newline will be forced even if there is only one item.
+
+
+    Returns
+    -------
+    str
+        The prettified list string.
+
+
+    Examples
+    --------
+    >>> items = ["one", "two", "three", "four"]
+    >>> pretty_join(items, "Test items")
     """
 
     def _formatter(item: T) -> str:
diff --git a/src/BAET/theme.py b/src/BAET/theme.py
index 60ed9df..43dbd2d 100644
--- a/src/BAET/theme.py
+++ b/src/BAET/theme.py
@@ -1,15 +1,11 @@
+"""Theme options used by Rich library for the app."""
+
 from typing import Final
 
 from rich.theme import Theme
 
 app_theme_dict: Final[dict[str, str]] = {
     "app.version": "italic bright_cyan",
-    # TODO: Remove
-    "argparse.arg_default": "dim italic",
-    "argparse.arg_default_parens": "dim",
-    "argparse.arg_default_value": "not italic bold dim",
-    "argparse.help_keyword": "bold blue",
-    "argparse.debug_todo": "reverse bold indian_red",
     # Help screen
     "keyword": "bold blue",
     "todo": "reverse bold indian_red",
diff --git a/tests/cli/__init__.py b/tests/cli/__init__.py
new file mode 100644
index 0000000..e69de29