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G4.88 Split FILE validator into new style validators. #88
Labels
Group 2 - Data Importing
Any issue relating to importing of biological data into either Chado or any other database.
Group 4 - API | Services | Plugins
Any issue related to developing an API (i.e. services + plugins)
Milestone
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laceysanderson
added
Group 2 - Data Importing
Any issue relating to importing of biological data into either Chado or any other database.
Group 4 - API | Services | Plugins
Any issue related to developing an API (i.e. services + plugins)
labels
Jun 26, 2024
4 tasks
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Unsure what to do here 😟 |
This was referenced Jul 24, 2024
Merged
A validator has been set to validate only the tsv file format, but since the module may support other file formats such as CSV, this validator will need to be redesigned. Design changes:
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20 tasks
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Labels
Group 2 - Data Importing
Any issue relating to importing of biological data into either Chado or any other database.
Group 4 - API | Services | Plugins
Any issue related to developing an API (i.e. services + plugins)
Branch
g4.88-fileValidators
Groups
Group 2 - Data Importing, Group 4 - API | Services | Plugins
Dependencies
Describe
This issue is meant to upgrade the existing DataFile to the new style described in Issue #82.
Does not remove the original validator! Does not update trait importer to use this new validator.
Design
This should be split into two validators.
The first one is a generic check the file is valid without looking it in. This will be in inputType file and be given the filename with full path and the fid (if uploaded). It will check the following:
The other one is specific to tsv format and has an inputType of header and will be given the first row of the file as an array. It will implement validateRow and check that the contents of the first row are in TSV format.
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