Merge pull request #267 from UC-Davis-molecular-computing/dev

Dev

.github/workflows/docs-check.yml

@@ -1,21 +1,21 @@
-name: "Docs Check"
-on: pull_request
-
-jobs:
-  docs:
-    runs-on: ubuntu-latest
-    steps:
-    - uses: actions/checkout@v2.3.4
-    - name: Set up Python
-      uses: actions/setup-python@v2
-      with:
-          python-version: '3.x'
-    - name: Install Sphinx
-      run: |
-        python -m pip install --upgrade pip
-        pip install sphinx sphinx_rtd_theme
-    - name: Move to docs folder and build
-      run: |
-        cd doc
-        pwd
-        sphinx-build -T -E -W -b html . _build
+name: "Docs Check"
+on: pull_request
+
+jobs:
+  docs:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v2.3.4
+      - name: Set up Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: '3.x'
+      - name: Install Sphinx
+        run: |
+          python -m pip install --upgrade pip
+          pip install sphinx sphinx_rtd_theme openpyxl
+      - name: Move to docs folder and build
+        run: |
+          cd doc
+          pwd
+          sphinx-build -T -E -W -b html . _build

.github/workflows/run_unit_tests.yml

@@ -1,28 +1,28 @@
-name: Run Unit Tests
-
-on: pull_request
-
-jobs:
-  build:
-
-    runs-on: ubuntu-latest
-    strategy:
-      matrix:
-        python-version: [3.7, 3.8, 3.9, "3.10", "3.11"]
-
-    steps:
-    - uses: actions/checkout@v2
-    - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v1
-      with:
-        python-version: ${{ matrix.python-version }}
-    - name: Setup conda
-      uses: s-weigand/setup-conda@v1
-      with:
-        activate-conda: true
-    - name: Install xlwt, xlrd, tabulate with conda
-      run: conda install xlwt=1.3.0 xlrd=2.0.1 tabulate=0.8.9
-    - name: Install docutils with conda
-      run: conda install docutils=0.16
-    - name: Test with unittest
-      run: python -m unittest -v tests/scadnano_tests.py
+name: Run Unit Tests
+
+on: pull_request
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: [ 3.7, 3.8, 3.9, "3.10", "3.11" ]
+
+    steps:
+      - uses: actions/checkout@v2
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v1
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Setup conda
+        uses: s-weigand/setup-conda@v1
+        with:
+          activate-conda: true
+      - name: Install openpyxl,tabulate with conda
+        run: conda install openpyxl=3.0.10 tabulate=0.8.10
+      - name: Install docutils with conda
+        run: conda install docutils=0.16
+      - name: Test with unittest
+        run: python -m unittest -v tests/scadnano_tests.py