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Adjust to nf-core template #215

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erinyoung opened this issue Aug 15, 2023 · 2 comments
Open

Adjust to nf-core template #215

erinyoung opened this issue Aug 15, 2023 · 2 comments
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enhancement New feature or request

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@erinyoung
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To make it more portable.

@erinyoung erinyoung added the enhancement New feature or request label Aug 15, 2023
@erinyoung
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Notes :

There are some aspects of the nf-core template that I'd like to avoid, such as defining variables in the config file in such a way that they can not be overridden on the command line.

Other things can be adopted. For example, #221 uses the same process labels.

@erinyoung
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Guide for how to do this : https://github.com/apetkau/nf-core-assemblyexample

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