diff --git a/_r_e_a_d_m_e_8md.html b/_r_e_a_d_m_e_8md.html index d6491d707..526765d3e 100644 --- a/_r_e_a_d_m_e_8md.html +++ b/_r_e_a_d_m_e_8md.html @@ -102,7 +102,7 @@ diff --git a/annotated.html b/annotated.html index 421348ee8..386ced80c 100644 --- a/annotated.html +++ b/annotated.html @@ -147,7 +147,7 @@ diff --git a/barray-bones_8hpp.html b/barray-bones_8hpp.html index b6812544a..824b0d6bd 100644 --- a/barray-bones_8hpp.html +++ b/barray-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/barray-bones_8hpp_source.html b/barray-bones_8hpp_source.html index 0a22a04bb..7caa79914 100644 --- a/barray-bones_8hpp_source.html +++ b/barray-bones_8hpp_source.html @@ -328,7 +328,7 @@ diff --git a/barray-iterator_8hpp.html b/barray-iterator_8hpp.html index e905f8a89..abad13486 100644 --- a/barray-iterator_8hpp.html +++ b/barray-iterator_8hpp.html @@ -112,7 +112,7 @@ diff --git a/barray-iterator_8hpp_source.html b/barray-iterator_8hpp_source.html index d496ed682..c7c48481f 100644 --- a/barray-iterator_8hpp_source.html +++ b/barray-iterator_8hpp_source.html @@ -149,7 +149,7 @@ diff --git a/barray-meat-operators_8hpp.html b/barray-meat-operators_8hpp.html index e666bffc3..9f856c335 100644 --- a/barray-meat-operators_8hpp.html +++ b/barray-meat-operators_8hpp.html @@ -576,7 +576,7 @@

diff --git a/barray-meat-operators_8hpp_source.html b/barray-meat-operators_8hpp_source.html index a08e2ea3b..42303b980 100644 --- a/barray-meat-operators_8hpp_source.html +++ b/barray-meat-operators_8hpp_source.html @@ -240,7 +240,7 @@ diff --git a/barray-meat_8hpp.html b/barray-meat_8hpp.html index 260e6accd..df85cf0b9 100644 --- a/barray-meat_8hpp.html +++ b/barray-meat_8hpp.html @@ -164,7 +164,7 @@

  • include
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barray-meat_8hpp_source.html b/barray-meat_8hpp_source.html index 715d6bf6b..8513c8e5e 100644 --- a/barray-meat_8hpp_source.html +++ b/barray-meat_8hpp_source.html @@ -1444,7 +1444,7 @@ diff --git a/barraycell-bones_8hpp.html b/barraycell-bones_8hpp.html index d423eed7d..d9255c099 100644 --- a/barraycell-bones_8hpp.html +++ b/barraycell-bones_8hpp.html @@ -123,7 +123,7 @@ diff --git a/barraycell-bones_8hpp_source.html b/barraycell-bones_8hpp_source.html index c7f8458d8..8dd2ac65a 100644 --- a/barraycell-bones_8hpp_source.html +++ b/barraycell-bones_8hpp_source.html @@ -204,7 +204,7 @@ diff --git a/barraycell-meat_8hpp.html b/barraycell-meat_8hpp.html index 6db835e70..2194ca248 100644 --- a/barraycell-meat_8hpp.html +++ b/barraycell-meat_8hpp.html @@ -113,7 +113,7 @@ diff --git a/barraycell-meat_8hpp_source.html b/barraycell-meat_8hpp_source.html index 8042e7491..0671d6c90 100644 --- a/barraycell-meat_8hpp_source.html +++ b/barraycell-meat_8hpp_source.html @@ -220,7 +220,7 @@ diff --git a/barraydense-bones_8hpp.html b/barraydense-bones_8hpp.html index 00914a571..6abcc01d2 100644 --- a/barraydense-bones_8hpp.html +++ b/barraydense-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/barraydense-bones_8hpp_source.html b/barraydense-bones_8hpp_source.html index cac81f2d0..1f5ffd567 100644 --- a/barraydense-bones_8hpp_source.html +++ b/barraydense-bones_8hpp_source.html @@ -340,7 +340,7 @@ diff --git a/barraydense-meat-operators_8hpp.html b/barraydense-meat-operators_8hpp.html index b63e15748..f30431c16 100644 --- a/barraydense-meat-operators_8hpp.html +++ b/barraydense-meat-operators_8hpp.html @@ -481,7 +481,7 @@

  • include
  • barry
  • barraydense-meat-operators.hpp
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  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydense-meat-operators_8hpp_source.html b/barraydense-meat-operators_8hpp_source.html index 78de1ac66..030191d14 100644 --- a/barraydense-meat-operators_8hpp_source.html +++ b/barraydense-meat-operators_8hpp_source.html @@ -231,7 +231,7 @@ diff --git a/barraydense-meat_8hpp.html b/barraydense-meat_8hpp.html index b8bf376f7..fc7d41653 100644 --- a/barraydense-meat_8hpp.html +++ b/barraydense-meat_8hpp.html @@ -252,7 +252,7 @@

  • include
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    • -
  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydense-meat_8hpp_source.html b/barraydense-meat_8hpp_source.html index d58b317f6..143dac985 100644 --- a/barraydense-meat_8hpp_source.html +++ b/barraydense-meat_8hpp_source.html @@ -1199,7 +1199,7 @@ diff --git a/barraydensecell-bones_8hpp.html b/barraydensecell-bones_8hpp.html index cd8336c48..597ed67ed 100644 --- a/barraydensecell-bones_8hpp.html +++ b/barraydensecell-bones_8hpp.html @@ -158,7 +158,7 @@

  • include
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  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydensecell-bones_8hpp_source.html b/barraydensecell-bones_8hpp_source.html index e11c95996..d1e19d618 100644 --- a/barraydensecell-bones_8hpp_source.html +++ b/barraydensecell-bones_8hpp_source.html @@ -189,7 +189,7 @@ diff --git a/barraydensecell-meat_8hpp.html b/barraydensecell-meat_8hpp.html index 557902206..f0ff68200 100644 --- a/barraydensecell-meat_8hpp.html +++ b/barraydensecell-meat_8hpp.html @@ -152,7 +152,7 @@

  • include
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    • -
  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydensecell-meat_8hpp_source.html b/barraydensecell-meat_8hpp_source.html index 1ff0c22c0..f96d1be0f 100644 --- a/barraydensecell-meat_8hpp_source.html +++ b/barraydensecell-meat_8hpp_source.html @@ -235,7 +235,7 @@ diff --git a/barraydensecol-bones_8hpp.html b/barraydensecol-bones_8hpp.html index 0092caf3f..574d7624a 100644 --- a/barraydensecol-bones_8hpp.html +++ b/barraydensecol-bones_8hpp.html @@ -216,7 +216,7 @@

  • include
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  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydensecol-bones_8hpp_source.html b/barraydensecol-bones_8hpp_source.html index a9925e947..e3a1caded 100644 --- a/barraydensecol-bones_8hpp_source.html +++ b/barraydensecol-bones_8hpp_source.html @@ -246,7 +246,7 @@ diff --git a/barraydenserow-bones_8hpp.html b/barraydenserow-bones_8hpp.html index 02c4a2a29..8c4e8e753 100644 --- a/barraydenserow-bones_8hpp.html +++ b/barraydenserow-bones_8hpp.html @@ -216,7 +216,7 @@

  • include
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  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydenserow-bones_8hpp_source.html b/barraydenserow-bones_8hpp_source.html index 96370adb0..f83a2704e 100644 --- a/barraydenserow-bones_8hpp_source.html +++ b/barraydenserow-bones_8hpp_source.html @@ -257,7 +257,7 @@ diff --git a/barrayrow-bones_8hpp.html b/barrayrow-bones_8hpp.html index 40533b5b0..7f19c71db 100644 --- a/barrayrow-bones_8hpp.html +++ b/barrayrow-bones_8hpp.html @@ -114,7 +114,7 @@ diff --git a/barrayrow-bones_8hpp_source.html b/barrayrow-bones_8hpp_source.html index 1109c64dd..3a1982fb1 100644 --- a/barrayrow-bones_8hpp_source.html +++ b/barrayrow-bones_8hpp_source.html @@ -195,7 +195,7 @@ diff --git a/barrayrow-meat_8hpp.html b/barrayrow-meat_8hpp.html index 6b68a920c..dd6ddab25 100644 --- a/barrayrow-meat_8hpp.html +++ b/barrayrow-meat_8hpp.html @@ -350,7 +350,7 @@

  • include
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  • barrayrow-meat.hpp
    • -
  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barrayrow-meat_8hpp_source.html b/barrayrow-meat_8hpp_source.html index 7750e9f04..6cd8ff6d5 100644 --- a/barrayrow-meat_8hpp_source.html +++ b/barrayrow-meat_8hpp_source.html @@ -229,7 +229,7 @@ diff --git a/barrayvector-bones_8hpp.html b/barrayvector-bones_8hpp.html index eab170688..ff11e724e 100644 --- a/barrayvector-bones_8hpp.html +++ b/barrayvector-bones_8hpp.html @@ -115,7 +115,7 @@ diff --git a/barrayvector-bones_8hpp_source.html b/barrayvector-bones_8hpp_source.html index 2a4a3d314..194c898f9 100644 --- a/barrayvector-bones_8hpp_source.html +++ b/barrayvector-bones_8hpp_source.html @@ -232,7 +232,7 @@ diff --git a/barrayvector-meat_8hpp.html b/barrayvector-meat_8hpp.html index bfae049fd..fa6d112f2 100644 --- a/barrayvector-meat_8hpp.html +++ b/barrayvector-meat_8hpp.html @@ -104,7 +104,7 @@ diff --git a/barrayvector-meat_8hpp_source.html b/barrayvector-meat_8hpp_source.html index b9b4025f4..9bbb102c2 100644 --- a/barrayvector-meat_8hpp_source.html +++ b/barrayvector-meat_8hpp_source.html @@ -446,7 +446,7 @@ diff --git a/barry-configuration_8hpp.html b/barry-configuration_8hpp.html index 272f7c185..ba475a125 100644 --- a/barry-configuration_8hpp.html +++ b/barry-configuration_8hpp.html @@ -257,7 +257,7 @@

  • include
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barry-configuration_8hpp_source.html b/barry-configuration_8hpp_source.html index d4b0fad0d..5cae094c2 100644 --- a/barry-configuration_8hpp_source.html +++ b/barry-configuration_8hpp_source.html @@ -160,7 +160,7 @@ diff --git a/barry-debug_8hpp.html b/barry-debug_8hpp.html index 3749a2264..d75ab9f67 100644 --- a/barry-debug_8hpp.html +++ b/barry-debug_8hpp.html @@ -139,7 +139,7 @@

  • include
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diff --git a/barry-debug_8hpp_source.html b/barry-debug_8hpp_source.html index 8d0e8f581..1bb524462 100644 --- a/barry-debug_8hpp_source.html +++ b/barry-debug_8hpp_source.html @@ -146,7 +146,7 @@ diff --git a/barry-macros_8hpp.html b/barry-macros_8hpp.html index bd73f2734..c9deef151 100644 --- a/barry-macros_8hpp.html +++ b/barry-macros_8hpp.html @@ -214,7 +214,7 @@

  • include
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barry-macros_8hpp_source.html b/barry-macros_8hpp_source.html index ddd8a1db0..8004616a8 100644 --- a/barry-macros_8hpp_source.html +++ b/barry-macros_8hpp_source.html @@ -114,7 +114,7 @@ diff --git a/barry_8hpp.html b/barry_8hpp.html index e1a6c5244..5118093bb 100644 --- a/barry_8hpp.html +++ b/barry_8hpp.html @@ -402,7 +402,7 @@

  • include
  • barry
  • barry.hpp
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  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barry_8hpp_source.html b/barry_8hpp_source.html index a34741b84..9efe0123e 100644 --- a/barry_8hpp_source.html +++ b/barry_8hpp_source.html @@ -233,7 +233,7 @@ diff --git a/cell-bones_8hpp.html b/cell-bones_8hpp.html index 79d29711a..69f6f6adb 100644 --- a/cell-bones_8hpp.html +++ b/cell-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/cell-bones_8hpp_source.html b/cell-bones_8hpp_source.html index ddc218da6..1175a0e2f 100644 --- a/cell-bones_8hpp_source.html +++ b/cell-bones_8hpp_source.html @@ -159,7 +159,7 @@ diff --git a/cell-meat_8hpp.html b/cell-meat_8hpp.html index 76e1b303d..c4c423fa3 100644 --- a/cell-meat_8hpp.html +++ b/cell-meat_8hpp.html @@ -113,7 +113,7 @@ diff --git a/cell-meat_8hpp_source.html b/cell-meat_8hpp_source.html index 794d50cc1..789caeabf 100644 --- a/cell-meat_8hpp_source.html +++ b/cell-meat_8hpp_source.html @@ -180,7 +180,7 @@ diff --git a/class_b_array-members.html b/class_b_array-members.html index f1c3066be..46c02a9ea 100644 --- a/class_b_array-members.html +++ b/class_b_array-members.html @@ -165,7 +165,7 @@ diff --git a/class_b_array.html b/class_b_array.html index ec935ecf3..4dd7f81d9 100644 --- a/class_b_array.html +++ b/class_b_array.html @@ -2141,7 +2141,7 @@

  • BArray
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_b_array_cell-members.html b/class_b_array_cell-members.html index 778d825c3..fd0dc5340 100644 --- a/class_b_array_cell-members.html +++ b/class_b_array_cell-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_cell.html b/class_b_array_cell.html index 7508f32bd..a586e7cdf 100644 --- a/class_b_array_cell.html +++ b/class_b_array_cell.html @@ -430,7 +430,7 @@

  • BArrayCell
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diff --git a/class_b_array_cell__const-members.html b/class_b_array_cell__const-members.html index cd5e7e35e..4aa57accf 100644 --- a/class_b_array_cell__const-members.html +++ b/class_b_array_cell__const-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_cell__const.html b/class_b_array_cell__const.html index d0580a18d..dde36c7b2 100644 --- a/class_b_array_cell__const.html +++ b/class_b_array_cell__const.html @@ -430,7 +430,7 @@

  • BArrayCell_const
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diff --git a/class_b_array_dense-members.html b/class_b_array_dense-members.html index 1250f43e5..7924f11ac 100644 --- a/class_b_array_dense-members.html +++ b/class_b_array_dense-members.html @@ -170,7 +170,7 @@ diff --git a/class_b_array_dense.html b/class_b_array_dense.html index 8170139df..01b1bfbfa 100644 --- a/class_b_array_dense.html +++ b/class_b_array_dense.html @@ -2668,7 +2668,7 @@

  • BArrayDense
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diff --git a/class_b_array_dense_cell-members.html b/class_b_array_dense_cell-members.html index 26602e21b..ae2ec7ae7 100644 --- a/class_b_array_dense_cell-members.html +++ b/class_b_array_dense_cell-members.html @@ -117,7 +117,7 @@ diff --git a/class_b_array_dense_cell.html b/class_b_array_dense_cell.html index 888df9a2d..c910b49fe 100644 --- a/class_b_array_dense_cell.html +++ b/class_b_array_dense_cell.html @@ -550,7 +550,7 @@

  • BArrayDenseCell
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diff --git a/class_b_array_dense_cell__const.html b/class_b_array_dense_cell__const.html index db29fde51..41cbd8b35 100644 --- a/class_b_array_dense_cell__const.html +++ b/class_b_array_dense_cell__const.html @@ -111,7 +111,7 @@ diff --git a/class_b_array_dense_col-members.html b/class_b_array_dense_col-members.html index 9602a4e27..04e39d697 100644 --- a/class_b_array_dense_col-members.html +++ b/class_b_array_dense_col-members.html @@ -112,7 +112,7 @@ diff --git a/class_b_array_dense_col.html b/class_b_array_dense_col.html index 30dd10d14..dd943492d 100644 --- a/class_b_array_dense_col.html +++ b/class_b_array_dense_col.html @@ -379,7 +379,7 @@

  • BArrayDenseCol
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  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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diff --git a/class_b_array_dense_col__const-members.html b/class_b_array_dense_col__const-members.html index 60d2813f9..873b1b0ef 100644 --- a/class_b_array_dense_col__const-members.html +++ b/class_b_array_dense_col__const-members.html @@ -111,7 +111,7 @@ diff --git a/class_b_array_dense_col__const.html b/class_b_array_dense_col__const.html index 9a7cba1c7..26f7aba4a 100644 --- a/class_b_array_dense_col__const.html +++ b/class_b_array_dense_col__const.html @@ -351,7 +351,7 @@

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diff --git a/class_b_array_dense_row-members.html b/class_b_array_dense_row-members.html index a95088a4e..fcb6a4426 100644 --- a/class_b_array_dense_row-members.html +++ b/class_b_array_dense_row-members.html @@ -112,7 +112,7 @@ diff --git a/class_b_array_dense_row.html b/class_b_array_dense_row.html index dd6660463..07879b0b0 100644 --- a/class_b_array_dense_row.html +++ b/class_b_array_dense_row.html @@ -379,7 +379,7 @@

  • BArrayDenseRow
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diff --git a/class_b_array_dense_row__const-members.html b/class_b_array_dense_row__const-members.html index 660f153f6..85af466d5 100644 --- a/class_b_array_dense_row__const-members.html +++ b/class_b_array_dense_row__const-members.html @@ -111,7 +111,7 @@ diff --git a/class_b_array_dense_row__const.html b/class_b_array_dense_row__const.html index c529573ee..6544e4c5e 100644 --- a/class_b_array_dense_row__const.html +++ b/class_b_array_dense_row__const.html @@ -351,7 +351,7 @@

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diff --git a/class_b_array_row-members.html b/class_b_array_row-members.html index efe904efd..a63c76a85 100644 --- a/class_b_array_row-members.html +++ b/class_b_array_row-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_row.html b/class_b_array_row.html index 85b810107..62826e12f 100644 --- a/class_b_array_row.html +++ b/class_b_array_row.html @@ -354,7 +354,7 @@

  • BArrayRow
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diff --git a/class_b_array_row__const-members.html b/class_b_array_row__const-members.html index 253d9ae90..64039cad3 100644 --- a/class_b_array_row__const-members.html +++ b/class_b_array_row__const-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_row__const.html b/class_b_array_row__const.html index 7fb4f0371..5df7176db 100644 --- a/class_b_array_row__const.html +++ b/class_b_array_row__const.html @@ -354,7 +354,7 @@

  • BArrayRow_const
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    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_b_array_vector-members.html b/class_b_array_vector-members.html index 2248d4f7f..c0ac27263 100644 --- a/class_b_array_vector-members.html +++ b/class_b_array_vector-members.html @@ -118,7 +118,7 @@ diff --git a/class_b_array_vector.html b/class_b_array_vector.html index 408efe531..eb4ee8c0d 100644 --- a/class_b_array_vector.html +++ b/class_b_array_vector.html @@ -585,7 +585,7 @@

  • BArrayVector
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_b_array_vector__const-members.html b/class_b_array_vector__const-members.html index d6c6afbbe..c27c978a9 100644 --- a/class_b_array_vector__const-members.html +++ b/class_b_array_vector__const-members.html @@ -118,7 +118,7 @@ diff --git a/class_b_array_vector__const.html b/class_b_array_vector__const.html index 660ce7215..576169087 100644 --- a/class_b_array_vector__const.html +++ b/class_b_array_vector__const.html @@ -567,7 +567,7 @@

  • BArrayVector_const
    • -
  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Cell
    • -
  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_cell__const.html b/class_cell__const.html index efcf4f144..3ccd5ce25 100644 --- a/class_cell__const.html +++ b/class_cell__const.html @@ -111,7 +111,7 @@ diff --git a/class_const_b_array_row_iter-members.html b/class_const_b_array_row_iter-members.html index 4d1ffd3d5..76e517b42 100644 --- a/class_const_b_array_row_iter-members.html +++ b/class_const_b_array_row_iter-members.html @@ -110,7 +110,7 @@ diff --git a/class_const_b_array_row_iter.html b/class_const_b_array_row_iter.html index e760dd50f..d93053222 100644 --- a/class_const_b_array_row_iter.html +++ b/class_const_b_array_row_iter.html @@ -278,7 +278,7 @@

  • ConstBArrayRowIter
    • -
  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Counter
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  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Counters
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  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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Definition at line 438 of file defm-meat.hpp.

- - - -

◆ likelihood()

- -
-
- - - - - - - - - - - - - - - - - - -
double DEFM::likelihood (std::vector< double > & par,
bool as_log = false 
)
-
-
@@ -841,7 +811,7 @@

  • DEFM
    • -
  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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diff --git a/class_flock-members.html b/class_flock-members.html index 59fd8271c..e05e79e5d 100644 --- a/class_flock-members.html +++ b/class_flock-members.html @@ -130,7 +130,7 @@ diff --git a/class_flock.html b/class_flock.html index e64080911..31b9a43a9 100644 --- a/class_flock.html +++ b/class_flock.html @@ -942,7 +942,7 @@

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  • Model
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  • PowerSet
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  • Progress
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  • Rule
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diff --git a/class_rules-members.html b/class_rules-members.html index d78e51d58..8384451e7 100644 --- a/class_rules-members.html +++ b/class_rules-members.html @@ -117,7 +117,7 @@ diff --git a/class_rules.html b/class_rules.html index 28d444b18..94ae6c376 100644 --- a/class_rules.html +++ b/class_rules.html @@ -617,7 +617,7 @@

  • Rules
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  • Support
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  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • include
  • barry
  • counters-meat.hpp
    • -
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  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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52 
53  void init();
54 
-
55  double likelihood(std::vector< double > & par, bool as_log = false);
-
56  void simulate(std::vector< double > par, int * y_out);
-
57 
-
58  size_t get_n_y() const;
-
59  size_t get_n_obs() const;
-
60  size_t get_n_covars() const;
-
61  size_t get_m_order() const;
-
62  size_t get_n_rows() const;
-
63 
-
64  const int * get_Y() const;
-
65  const int * get_ID() const;
-
66  const double * get_X() const;
-
67 
-
68  barry::FreqTable<int> motif_census(
-
69  std::vector< size_t > idx
-
70  );
-
71 
-
72  std::vector< double > logodds(
-
73  const std::vector< double > & par,
-
74  size_t i,
-
75  size_t j
-
76  );
-
77 
-
78  void set_names(
-
79  std::vector< std::string > Y_names_,
-
80  std::vector< std::string > X_names_
-
81  );
-
82 
-
83  const std::vector< std::string > & get_Y_names() const;
-
84  const std::vector< std::string > & get_X_names() const;
-
85 
-
86  void print() const;
-
87 
-
88  std::vector< bool > is_motif();
-
89 
-
90  bool get_column_major() const noexcept;
-
91 
-
92 };
-
93 
-
94 #endif
-
95 
+
55  void simulate(std::vector< double > par, int * y_out);
+
56 
+
57  size_t get_n_y() const;
+
58  size_t get_n_obs() const;
+
59  size_t get_n_covars() const;
+
60  size_t get_m_order() const;
+
61  size_t get_n_rows() const;
+
62 
+
63  const int * get_Y() const;
+
64  const int * get_ID() const;
+
65  const double * get_X() const;
+
66 
+
67  barry::FreqTable<int> motif_census(
+
68  std::vector< size_t > idx
+
69  );
+
70 
+
71  std::vector< double > logodds(
+
72  const std::vector< double > & par,
+
73  size_t i,
+
74  size_t j
+
75  );
+
76 
+
77  void set_names(
+
78  std::vector< std::string > Y_names_,
+
79  std::vector< std::string > X_names_
+
80  );
+
81 
+
82  const std::vector< std::string > & get_Y_names() const;
+
83  const std::vector< std::string > & get_X_names() const;
+
84 
+
85  void print() const;
+
86 
+
87  std::vector< bool > is_motif();
+
88 
+
89  bool get_column_major() const noexcept;
+
90 
+
91 };
+
92 
+
93 #endif
+
94 
DEFM::is_motif
std::vector< bool > is_motif()
Definition: defm-meat.hpp:438
DEFM::get_n_covars
size_t get_n_covars() const
Definition: defm-meat.hpp:289
@@ -194,7 +193,6 @@
DEFM::init
void init()
Definition: defm-meat.hpp:214
DEFM::get_m_order
size_t get_m_order() const
Definition: defm-meat.hpp:294
DEFM::set_names
void set_names(std::vector< std::string > Y_names_, std::vector< std::string > X_names_)
Definition: defm-meat.hpp:400
-
DEFM::likelihood
double likelihood(std::vector< double > &par, bool as_log=false)
DEFM::get_n_rows
size_t get_n_rows() const
Definition: defm-meat.hpp:299
DEFM::get_ID
const int * get_ID() const
Definition: defm-meat.hpp:309
DEFM::get_model
DEFMModel & get_model()
Definition: defm-bones.hpp:49
@@ -218,7 +216,7 @@ diff --git a/defm-meat_8hpp.html b/defm-meat_8hpp.html index b0d394360..af3433361 100644 --- a/defm-meat_8hpp.html +++ b/defm-meat_8hpp.html @@ -213,7 +213,7 @@

  • include
  • barry
  • models
  • defm
  • defm-meat.hpp
    • -
  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/defm-meat_8hpp_source.html b/defm-meat_8hpp_source.html index 740ba0cf8..c68bf3883 100644 --- a/defm-meat_8hpp_source.html +++ b/defm-meat_8hpp_source.html @@ -592,7 +592,7 @@ diff --git a/defm-types_8hpp.html b/defm-types_8hpp.html index 4a0d29d94..5ba3ae3a2 100644 --- a/defm-types_8hpp.html +++ b/defm-types_8hpp.html @@ -171,7 +171,7 @@

  • include
  • barry
  • models
  • defm
  • defm-types.hpp
    • -
  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/defm-types_8hpp_source.html b/defm-types_8hpp_source.html index c3325ee38..b6f3e21d0 100644 --- a/defm-types_8hpp_source.html +++ b/defm-types_8hpp_source.html @@ -306,7 +306,7 @@ diff --git a/defm_2counters_8hpp.html b/defm_2counters_8hpp.html index 6fbdc0261..98ca5f7c0 100644 --- a/defm_2counters_8hpp.html +++ b/defm_2counters_8hpp.html @@ -307,16 +307,16 @@

Value:
(\
-
((a) == 0) ? "\u2080" : (\
-
((a) == 1) ? "\u2081" : (\
-
((a) == 2) ? "\u2082" : (\
-
((a) == 3) ? "\u2083" : (\
-
((a) == 4) ? "\u2084" : (\
-
((a) == 5) ? "\u2085" : (\
-
((a) == 6) ? "\u2086" : (\
-
((a) == 7) ? "\u2087" : (\
-
((a) == 8) ? "\u2088" : \
-
"\u2089"))))))))\
+
((a) == 0) ? u8"\u2080" : (\
+
((a) == 1) ? u8"\u2081" : (\
+
((a) == 2) ? u8"\u2082" : (\
+
((a) == 3) ? u8"\u2083" : (\
+
((a) == 4) ? u8"\u2084" : (\
+
((a) == 5) ? u8"\u2085" : (\
+
((a) == 6) ? u8"\u2086" : (\
+
((a) == 7) ? u8"\u2087" : (\
+
((a) == 8) ? u8"\u2088" : \
+
u8"\u2089"))))))))\
)
@@ -327,7 +327,7 @@

  • include
  • barry
  • models
  • defm
  • counters.hpp
    • -
  • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/defm_2counters_8hpp_source.html b/defm_2counters_8hpp_source.html index 06eeba98f..fe77e00f1 100644 --- a/defm_2counters_8hpp_source.html +++ b/defm_2counters_8hpp_source.html @@ -499,16 +499,16 @@
439  #else
440  #define UNI_SUB(a) \
441  (\
-
442  ((a) == 0) ? "\u2080" : (\
-
443  ((a) == 1) ? "\u2081" : (\
-
444  ((a) == 2) ? "\u2082" : (\
-
445  ((a) == 3) ? "\u2083" : (\
-
446  ((a) == 4) ? "\u2084" : (\
-
447  ((a) == 5) ? "\u2085" : (\
-
448  ((a) == 6) ? "\u2086" : (\
-
449  ((a) == 7) ? "\u2087" : (\
-
450  ((a) == 8) ? "\u2088" : \
-
451  "\u2089"))))))))\
+
442  ((a) == 0) ? u8"\u2080" : (\
+
443  ((a) == 1) ? u8"\u2081" : (\
+
444  ((a) == 2) ? u8"\u2082" : (\
+
445  ((a) == 3) ? u8"\u2083" : (\
+
446  ((a) == 4) ? u8"\u2084" : (\
+
447  ((a) == 5) ? u8"\u2085" : (\
+
448  ((a) == 6) ? u8"\u2086" : (\
+
449  ((a) == 7) ? u8"\u2087" : (\
+
450  ((a) == 8) ? u8"\u2088" : \
+
451  u8"\u2089"))))))))\
452  )
453  #endif
454 
@@ -538,7 +538,7 @@
478  #ifdef BARRY_WITH_LATEX
479  name += (motif(i,j) < 0 ? "^-" : "^+");
480  #else
-
481  name += (motif(i,j) < 0 ? "\u207B" : "\u207A");
+
481  name += (motif(i,j) < 0 ? u8"\u207B" : u8"\u207A");
482  #endif
483 
484  }
@@ -580,7 +580,7 @@
520  #ifdef BARRY_WITH_LATEX
521  name += (motif(m_order, j) < 0 ? "^-" : "^+" );
522  #else
-
523  name += (motif(m_order, j) < 0 ? "\u207B" : "\u207A" );
+
523  name += (motif(m_order, j) < 0 ? u8"\u207B" : u8"\u207A" );
524  #endif
525 
526 
@@ -797,7 +797,7 @@ diff --git a/defm_8hpp.html b/defm_8hpp.html index 16afc4544..0bd83bc36 100644 --- a/defm_8hpp.html +++ b/defm_8hpp.html @@ -133,7 +133,7 @@ diff --git a/defm_8hpp_source.html b/defm_8hpp_source.html index 1067801c3..dbd5385c8 100644 --- a/defm_8hpp_source.html +++ b/defm_8hpp_source.html @@ -126,7 +126,7 @@ diff --git a/dir_000001_000002.html b/dir_000001_000002.html index db72d33ff..3babde9bb 100644 --- a/dir_000001_000002.html +++ b/dir_000001_000002.html @@ -98,7 +98,7 @@

barry → counters Relation

diff --git a/dir_000003_000004.html b/dir_000003_000004.html index 7034061b2..956054701 100644 --- a/dir_000003_000004.html +++ b/dir_000003_000004.html @@ -98,7 +98,7 @@

models → defm Relation

  • include
  • barry
  • models
    • -
  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/dir_000003_000005.html b/dir_000003_000005.html index c8f5bb6f4..93bc9d413 100644 --- a/dir_000003_000005.html +++ b/dir_000003_000005.html @@ -98,7 +98,7 @@

models → geese Relation

  • include
  • barry
  • models
    • -
  • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/dir_488ec4010567cc6d95c62bdcb57a6d3e.html b/dir_488ec4010567cc6d95c62bdcb57a6d3e.html index 16ff4da40..72a3a9a9f 100644 --- a/dir_488ec4010567cc6d95c62bdcb57a6d3e.html +++ b/dir_488ec4010567cc6d95c62bdcb57a6d3e.html @@ -130,7 +130,7 @@ diff --git a/dir_6e63e3665115632dc5d61b2d6d6c3354.html b/dir_6e63e3665115632dc5d61b2d6d6c3354.html index 91a94a3d1..41bfc1764 100644 --- a/dir_6e63e3665115632dc5d61b2d6d6c3354.html +++ b/dir_6e63e3665115632dc5d61b2d6d6c3354.html @@ -203,7 +203,7 @@ diff --git a/dir_b3150c389b0f5b078392750f1ae70361.html b/dir_b3150c389b0f5b078392750f1ae70361.html index 925b1f14b..d38255796 100644 --- a/dir_b3150c389b0f5b078392750f1ae70361.html +++ b/dir_b3150c389b0f5b078392750f1ae70361.html @@ -110,7 +110,7 @@ diff --git a/dir_c5954a04c87570f0664da134464d5428.html b/dir_c5954a04c87570f0664da134464d5428.html index 13d584347..8fedc6bca 100644 --- a/dir_c5954a04c87570f0664da134464d5428.html +++ b/dir_c5954a04c87570f0664da134464d5428.html @@ -134,7 +134,7 @@ diff --git a/dir_d44c64559bbebec7f509842c48db8b23.html b/dir_d44c64559bbebec7f509842c48db8b23.html index 7b49ffdb1..d3fe4cb43 100644 --- a/dir_d44c64559bbebec7f509842c48db8b23.html +++ b/dir_d44c64559bbebec7f509842c48db8b23.html @@ -117,7 +117,7 @@ diff --git a/dir_d7a554d3e09ed8456d56450fe8436947.html b/dir_d7a554d3e09ed8456d56450fe8436947.html index 8f5e4bb96..04304db7e 100644 --- a/dir_d7a554d3e09ed8456d56450fe8436947.html +++ b/dir_d7a554d3e09ed8456d56450fe8436947.html @@ -116,7 +116,7 @@ diff --git a/files.html b/files.html index b0f492a3e..73c1e74cc 100644 --- a/files.html +++ b/files.html @@ -173,7 +173,7 @@ diff --git a/flock-bones_8hpp.html b/flock-bones_8hpp.html index 3889c523a..f17e75081 100644 --- a/flock-bones_8hpp.html +++ b/flock-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/flock-bones_8hpp_source.html b/flock-bones_8hpp_source.html index 0d0e0850e..bb879bce0 100644 --- a/flock-bones_8hpp_source.html +++ b/flock-bones_8hpp_source.html @@ -196,7 +196,7 @@ diff --git a/flock-meat_8hpp.html b/flock-meat_8hpp.html index a7bf232b1..1036b763b 100644 --- a/flock-meat_8hpp.html +++ b/flock-meat_8hpp.html @@ -113,7 +113,7 @@ diff --git a/flock-meat_8hpp_source.html b/flock-meat_8hpp_source.html index ffbff3acb..1d2e4341c 100644 --- a/flock-meat_8hpp_source.html +++ b/flock-meat_8hpp_source.html @@ -450,7 +450,7 @@ diff --git a/formula_8hpp.html b/formula_8hpp.html index 225bfb017..97a109167 100644 --- a/formula_8hpp.html +++ b/formula_8hpp.html @@ -206,7 +206,7 @@

Transition effects

diff --git a/formula_8hpp_source.html b/formula_8hpp_source.html index b0121ecd2..b52fb26d3 100644 --- a/formula_8hpp_source.html +++ b/formula_8hpp_source.html @@ -288,7 +288,7 @@ diff --git a/freqtable_8hpp.html b/freqtable_8hpp.html index 16e11ba77..61adce6db 100644 --- a/freqtable_8hpp.html +++ b/freqtable_8hpp.html @@ -122,7 +122,7 @@ diff --git a/freqtable_8hpp_source.html b/freqtable_8hpp_source.html index 38ff50840..d9cdbbaee 100644 --- a/freqtable_8hpp_source.html +++ b/freqtable_8hpp_source.html @@ -357,7 +357,7 @@ diff --git a/functions.html b/functions.html index a38cc5fbb..68a8cc586 100644 --- a/functions.html +++ b/functions.html @@ -159,7 +159,7 @@

- a -

    diff --git a/functions_b.html b/functions_b.html index d85831820..149ef79e0 100644 --- a/functions_b.html +++ b/functions_b.html @@ -192,7 +192,7 @@

    - b -

      diff --git a/functions_c.html b/functions_c.html index b0db25aa1..6e9503054 100644 --- a/functions_c.html +++ b/functions_c.html @@ -203,7 +203,7 @@

      - c -

        diff --git a/functions_d.html b/functions_d.html index 8579fbc2f..5c92bc520 100644 --- a/functions_d.html +++ b/functions_d.html @@ -166,7 +166,7 @@

        - d -

          diff --git a/functions_e.html b/functions_e.html index 69a7bafc9..9e2e8292c 100644 --- a/functions_e.html +++ b/functions_e.html @@ -137,7 +137,7 @@

          - e -

            diff --git a/functions_f.html b/functions_f.html index 31bfa0b42..ebd647aa9 100644 --- a/functions_f.html +++ b/functions_f.html @@ -113,7 +113,7 @@

            - f -

              diff --git a/functions_func.html b/functions_func.html index 075d998da..48626e319 100644 --- a/functions_func.html +++ b/functions_func.html @@ -140,7 +140,7 @@

              - a -

                diff --git a/functions_func_b.html b/functions_func_b.html index 368bed637..a57e5b527 100644 --- a/functions_func_b.html +++ b/functions_func_b.html @@ -151,7 +151,7 @@

                - b -

                  diff --git a/functions_func_c.html b/functions_func_c.html index 0f3e5172b..f745ba9f4 100644 --- a/functions_func_c.html +++ b/functions_func_c.html @@ -155,7 +155,7 @@

                  - c -

                    diff --git a/functions_func_d.html b/functions_func_d.html index 3c6ca643e..8265ea697 100644 --- a/functions_func_d.html +++ b/functions_func_d.html @@ -129,7 +129,7 @@

                    - d -

                      diff --git a/functions_func_e.html b/functions_func_e.html index f0ea79346..0c61ab7e1 100644 --- a/functions_func_e.html +++ b/functions_func_e.html @@ -122,7 +122,7 @@

                      - e -

                        diff --git a/functions_func_f.html b/functions_func_f.html index 1d6eeb402..9ebbce71d 100644 --- a/functions_func_f.html +++ b/functions_func_f.html @@ -110,7 +110,7 @@

                        - f -

                          diff --git a/functions_func_g.html b/functions_func_g.html index 724c129a0..74bdb95b7 100644 --- a/functions_func_g.html +++ b/functions_func_g.html @@ -272,7 +272,7 @@

                          - g -

                            diff --git a/functions_func_i.html b/functions_func_i.html index 8e6fcb7a7..747a1755c 100644 --- a/functions_func_i.html +++ b/functions_func_i.html @@ -151,7 +151,7 @@

                            - i -

                              diff --git a/functions_func_l.html b/functions_func_l.html index 1adcf651d..1a5818de1 100644 --- a/functions_func_l.html +++ b/functions_func_l.html @@ -96,8 +96,7 @@

                              - l -

                              • likelihood() -: DEFM -, Geese +: Geese , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
                              • likelihood_exhaust() @@ -118,7 +117,7 @@

                                - l -

                                  diff --git a/functions_func_m.html b/functions_func_m.html index cd9cf481d..81d573b4b 100644 --- a/functions_func_m.html +++ b/functions_func_m.html @@ -110,7 +110,7 @@

                                  - m -

                                    diff --git a/functions_func_n.html b/functions_func_n.html index 5930aa930..dc437744a 100644 --- a/functions_func_n.html +++ b/functions_func_n.html @@ -166,7 +166,7 @@

                                    - n -

                                      diff --git a/functions_func_o.html b/functions_func_o.html index a89bae268..251d6c49e 100644 --- a/functions_func_o.html +++ b/functions_func_o.html @@ -228,7 +228,7 @@

                                      - o -

                                        diff --git a/functions_func_p.html b/functions_func_p.html index 1ea318ba2..37f124ecb 100644 --- a/functions_func_p.html +++ b/functions_func_p.html @@ -158,7 +158,7 @@

                                        - p -

                                          diff --git a/functions_func_r.html b/functions_func_r.html index 3a38865df..907e87626 100644 --- a/functions_func_r.html +++ b/functions_func_r.html @@ -136,7 +136,7 @@

                                          - r -

                                            diff --git a/functions_func_s.html b/functions_func_s.html index e46fc6510..c1964616f 100644 --- a/functions_func_s.html +++ b/functions_func_s.html @@ -189,7 +189,7 @@

                                            - s -

                                              diff --git a/functions_func_t.html b/functions_func_t.html index 331addce0..2809378df 100644 --- a/functions_func_t.html +++ b/functions_func_t.html @@ -116,7 +116,7 @@

                                              - t -

                                                diff --git a/functions_func_u.html b/functions_func_u.html index 5c843a5cf..085f73ff7 100644 --- a/functions_func_u.html +++ b/functions_func_u.html @@ -104,7 +104,7 @@

                                                - u -

                                                  diff --git a/functions_func_z.html b/functions_func_z.html index c094aa8c6..fc33c1925 100644 --- a/functions_func_z.html +++ b/functions_func_z.html @@ -109,7 +109,7 @@

                                                  - z -

                                                    diff --git a/functions_func_~.html b/functions_func_~.html index 0f6edd26d..3e58544a5 100644 --- a/functions_func_~.html +++ b/functions_func_~.html @@ -194,7 +194,7 @@

                                                    - ~ -

                                                      diff --git a/functions_g.html b/functions_g.html index 706d3a609..254246749 100644 --- a/functions_g.html +++ b/functions_g.html @@ -272,7 +272,7 @@

                                                      - g -

                                                        diff --git a/functions_h.html b/functions_h.html index 8c23f774b..6b1013f21 100644 --- a/functions_h.html +++ b/functions_h.html @@ -110,7 +110,7 @@

                                                        - h -

                                                          diff --git a/functions_i.html b/functions_i.html index c3111742d..de287e3be 100644 --- a/functions_i.html +++ b/functions_i.html @@ -171,7 +171,7 @@

                                                          - i -

                                                            diff --git a/functions_k.html b/functions_k.html index 8bf8ab550..fa4accf42 100644 --- a/functions_k.html +++ b/functions_k.html @@ -104,7 +104,7 @@

                                                            - k -

                                                              diff --git a/functions_l.html b/functions_l.html index e59c50a57..6e876db9e 100644 --- a/functions_l.html +++ b/functions_l.html @@ -99,8 +99,7 @@

                                                              - l -

                                                                : PhyloRuleDynData
                                                              • likelihood() -: DEFM -, Geese +: Geese , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
                                                              • likelihood_exhaust() @@ -125,7 +124,7 @@

                                                                - l -

                                                                  diff --git a/functions_m.html b/functions_m.html index f9f0a9e48..9bf0ed880 100644 --- a/functions_m.html +++ b/functions_m.html @@ -123,7 +123,7 @@

                                                                  - m -

                                                                    diff --git a/functions_n.html b/functions_n.html index 49605e45b..5e9e56c75 100644 --- a/functions_n.html +++ b/functions_n.html @@ -200,7 +200,7 @@

                                                                    - n -

                                                                      diff --git a/functions_o.html b/functions_o.html index 876a08cbb..a9d76fb03 100644 --- a/functions_o.html +++ b/functions_o.html @@ -237,7 +237,7 @@

                                                                      - o -

                                                                        diff --git a/functions_p.html b/functions_p.html index c47454f10..c640ea5d4 100644 --- a/functions_p.html +++ b/functions_p.html @@ -182,7 +182,7 @@

                                                                        - p -

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                                                                                              • models
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                                                                                                                                                                                    Code of Conduct

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100644 Binary files a/latex/class_const_b_array_row_iter__coll__graph.pdf and b/latex/class_const_b_array_row_iter__coll__graph.pdf differ diff --git a/latex/class_d_e_f_m.tex b/latex/class_d_e_f_m.tex index 70665607c..93d7f3e86 100644 --- a/latex/class_d_e_f_m.tex +++ b/latex/class_d_e_f_m.tex @@ -33,8 +33,6 @@ \item void \mbox{\hyperlink{class_d_e_f_m_a3a49994e3ecff9a0bfde8924900f98c8}{init}} () \item -double \mbox{\hyperlink{class_d_e_f_m_a5f2a5cb3137ca8ef5b2c1db97d604b54}{likelihood}} (std\+::vector$<$ double $>$ \&par, bool as\+\_\+log=false) -\item void \mbox{\hyperlink{class_d_e_f_m_afb829f5b9805da628740131f6f644c24}{simulate}} (std\+::vector$<$ double $>$ par, int $\ast$y\+\_\+out) \item size\+\_\+t \mbox{\hyperlink{class_d_e_f_m_af97885bc28233c5d73d353260a765907}{get\+\_\+n\+\_\+y}} () const @@ -232,12 +230,6 @@ Definition at line 438 of file defm-\/meat.\+hpp. -\mbox{\Hypertarget{class_d_e_f_m_a5f2a5cb3137ca8ef5b2c1db97d604b54}\label{class_d_e_f_m_a5f2a5cb3137ca8ef5b2c1db97d604b54}} -\index{DEFM@{DEFM}!likelihood@{likelihood}} -\index{likelihood@{likelihood}!DEFM@{DEFM}} -\doxysubsubsection{\texorpdfstring{likelihood()}{likelihood()}} -{\footnotesize\ttfamily double DEFM\+::likelihood (\begin{DoxyParamCaption}\item[{std\+::vector$<$ double $>$ \&}]{par, }\item[{bool}]{as\+\_\+log = {\ttfamily false} }\end{DoxyParamCaption})} - \mbox{\Hypertarget{class_d_e_f_m_abf519be0cc1245fbaf71842ca5a53519}\label{class_d_e_f_m_abf519be0cc1245fbaf71842ca5a53519}} \index{DEFM@{DEFM}!logodds@{logodds}} \index{logodds@{logodds}!DEFM@{DEFM}} diff --git a/latex/class_d_e_f_m__coll__graph.pdf b/latex/class_d_e_f_m__coll__graph.pdf index 1d0033dce..b5bf34034 100644 Binary files a/latex/class_d_e_f_m__coll__graph.pdf and b/latex/class_d_e_f_m__coll__graph.pdf differ diff --git a/latex/class_d_e_f_m__inherit__graph.pdf b/latex/class_d_e_f_m__inherit__graph.pdf 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+148,16 @@ {\bfseries Value\+:} \begin{DoxyCode}{0} \DoxyCodeLine{ (\(\backslash\)} -\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 0) ? \textcolor{stringliteral}{"{}\(\backslash\)u2080"{}} : (\(\backslash\)} -\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 1) ? \textcolor{stringliteral}{"{}\(\backslash\)u2081"{}} : (\(\backslash\)} -\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 2) ? \textcolor{stringliteral}{"{}\(\backslash\)u2082"{}} : (\(\backslash\)} -\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 3) ? \textcolor{stringliteral}{"{}\(\backslash\)u2083"{}} : (\(\backslash\)} -\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 4) ? \textcolor{stringliteral}{"{}\(\backslash\)u2084"{}} : (\(\backslash\)} -\DoxyCodeLine{ 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((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 1) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2081"{}} : (\(\backslash\)} +\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 2) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2082"{}} : (\(\backslash\)} +\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 3) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2083"{}} : (\(\backslash\)} +\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 4) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2084"{}} : (\(\backslash\)} +\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 5) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2085"{}} : (\(\backslash\)} +\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 6) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2086"{}} : (\(\backslash\)} +\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 7) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2087"{}} : (\(\backslash\)} +\DoxyCodeLine{ ((\mbox{\hyperlink{model-meat_8hpp_a81e02a278aaeae99b5dbef355ee6dd2f}{a}}) == 8) ? u8\textcolor{stringliteral}{"{}\(\backslash\)u2088"{}} : \(\backslash\)} +\DoxyCodeLine{ u8\textcolor{stringliteral}{"{}\(\backslash\)u2089"{}}))))))))\(\backslash\)} \DoxyCodeLine{ )} \end{DoxyCode} diff --git a/latex/defm_2counters_8hpp__dep__incl.pdf b/latex/defm_2counters_8hpp__dep__incl.pdf index 0c9c7a7c0..c466a2ab4 100644 Binary files a/latex/defm_2counters_8hpp__dep__incl.pdf and b/latex/defm_2counters_8hpp__dep__incl.pdf differ diff --git a/latex/defm_2counters_8hpp__incl.pdf b/latex/defm_2counters_8hpp__incl.pdf index 9a2bf2aee..13992d3db 100644 Binary files a/latex/defm_2counters_8hpp__incl.pdf and b/latex/defm_2counters_8hpp__incl.pdf 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\indexentry{DEFM@{DEFM}!get\_n\_covars@{get\_n\_covars}|hyperpage}{141} @@ -942,8 +942,8 @@ \indexentry{get\_n\_rows@{get\_n\_rows}!DEFM@{DEFM}|hyperpage}{141} \indexentry{DEFM@{DEFM}!get\_n\_y@{get\_n\_y}|hyperpage}{141} \indexentry{get\_n\_y@{get\_n\_y}!DEFM@{DEFM}|hyperpage}{141} -\indexentry{DEFM@{DEFM}!get\_X@{get\_X}|hyperpage}{142} -\indexentry{get\_X@{get\_X}!DEFM@{DEFM}|hyperpage}{142} +\indexentry{DEFM@{DEFM}!get\_X@{get\_X}|hyperpage}{141} +\indexentry{get\_X@{get\_X}!DEFM@{DEFM}|hyperpage}{141} \indexentry{DEFM@{DEFM}!get\_X\_names@{get\_X\_names}|hyperpage}{142} \indexentry{get\_X\_names@{get\_X\_names}!DEFM@{DEFM}|hyperpage}{142} \indexentry{DEFM@{DEFM}!get\_Y@{get\_Y}|hyperpage}{142} @@ -954,10 +954,8 @@ \indexentry{init@{init}!DEFM@{DEFM}|hyperpage}{142} \indexentry{DEFM@{DEFM}!is\_motif@{is\_motif}|hyperpage}{142} \indexentry{is\_motif@{is\_motif}!DEFM@{DEFM}|hyperpage}{142} -\indexentry{DEFM@{DEFM}!likelihood@{likelihood}|hyperpage}{143} 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--git a/latex/refman.ilg b/latex/refman.ilg index 6c43b1f82..3f67dc1e4 100644 --- a/latex/refman.ilg +++ b/latex/refman.ilg @@ -1,6 +1,6 @@ This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). -Scanning input file refman.idx......done (2475 entries accepted, 0 rejected). -Sorting entries........................done (30515 comparisons). -Generating output file refman.ind......done (3036 lines written, 0 warnings). +Scanning input file refman.idx......done (2473 entries accepted, 0 rejected). +Sorting entries........................done (30725 comparisons). +Generating output file refman.ind......done (3034 lines written, 0 warnings). Output written in refman.ind. Transcript written in refman.ilg. diff --git a/latex/refman.ind b/latex/refman.ind index 6129ebcc7..219a43eb8 100644 --- a/latex/refman.ind +++ b/latex/refman.ind @@ -1083,20 +1083,19 @@ \subitem {DEFM}, \hyperpage{140} \subitem {get\_column\_major}, \hyperpage{140} \subitem {get\_ID}, \hyperpage{140} - \subitem {get\_m\_order}, \hyperpage{141} + \subitem {get\_m\_order}, \hyperpage{140} \subitem {get\_model}, \hyperpage{141} \subitem {get\_n\_covars}, \hyperpage{141} \subitem {get\_n\_obs}, \hyperpage{141} \subitem {get\_n\_rows}, \hyperpage{141} \subitem {get\_n\_y}, \hyperpage{141} - \subitem {get\_X}, \hyperpage{142} + \subitem {get\_X}, \hyperpage{141} \subitem {get\_X\_names}, \hyperpage{142} \subitem {get\_Y}, \hyperpage{142} \subitem {get\_Y\_names}, \hyperpage{142} \subitem {init}, \hyperpage{142} \subitem {is\_motif}, \hyperpage{142} - \subitem {likelihood}, \hyperpage{143} - \subitem {logodds}, \hyperpage{143} + \subitem {logodds}, \hyperpage{142} \subitem {motif\_census}, \hyperpage{143} \subitem {print}, \hyperpage{143} \subitem {set\_names}, \hyperpage{143} @@ -1132,7 +1131,7 @@ \subitem {Phylo rules}, \hyperpage{39} \item {DEFMCounters} \subitem {Phylo rules}, \hyperpage{37} - \item {DEFMData}, \hyperpage{145} + \item {DEFMData}, \hyperpage{144} \subitem {Phylo rules}, \hyperpage{39} \item {DEFMModel} \subitem {Phylo rules}, \hyperpage{37} @@ -1459,7 +1458,7 @@ \item {get\_last\_name} \subitem {Counting}, \hyperpage{24} \item {get\_m\_order} - \subitem {DEFM}, \hyperpage{141} + \subitem {DEFM}, \hyperpage{140} \item {get\_model} \subitem {DEFM}, \hyperpage{141} \subitem {Flock}, \hyperpage{152} @@ -1535,7 +1534,7 @@ \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{185} \item {get\_X} - \subitem {DEFM}, \hyperpage{142} + \subitem {DEFM}, \hyperpage{141} \item {get\_X\_names} \subitem {DEFM}, \hyperpage{142} \item {get\_Y} @@ -1748,7 +1747,6 @@ \item {lb} \subitem {PhyloRuleDynData}, \hyperpage{213} \item {likelihood} - \subitem {DEFM}, \hyperpage{143} \subitem {Geese}, \hyperpage{167} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{186} @@ -1766,7 +1764,7 @@ \item {logical} \subitem {Phylo rules}, \hyperpage{45} \item {logodds} - \subitem {DEFM}, \hyperpage{143} + \subitem {DEFM}, \hyperpage{142} \indexspace diff --git a/latex/refman.log b/latex/refman.log index 142514bba..6177f2963 100644 --- a/latex/refman.log +++ b/latex/refman.log @@ -1,4 +1,4 @@ -This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Alpine Linux) (preloaded format=pdflatex 2023.9.19) 19 SEP 2023 19:47 +This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Alpine Linux) (preloaded format=pdflatex 2023.9.22) 22 SEP 2023 22:27 entering extended mode restricted \write18 enabled. %&-line parsing enabled. @@ -1193,7 +1193,7 @@ hylo.pdf pdfTeX warning: pdflatex (file ./group__rules-phylo.pdf): PDF inclusion: multip le pdfs with page group included in a single page > - + File: group__rules-phylo.pdf Graphic file (type pdf) Package pdftex.def Info: group__rules-phylo.pdf used on input line 13. @@ -1236,7 +1236,7 @@ Underfull \hbox (badness 10000) detected at line 470 pdfTeX warning: pdflatex (file ./group__counters-phylo.pdf): PDF inclusion: mul tiple pdfs with page group included in a single page > - + File: group__counters-phylo.pdf Graphic file (type pdf) Package pdftex.def Info: group__counters-phylo.pdf used on input line 13. @@ -1867,7 +1867,7 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): pdfTeX warning: pdflatex (file ./class_const_b_array_row_iter__coll__graph.pdf) : PDF inclusion: multiple pdfs with page group included in a single page > - File: class_const_b_array_row_iter__coll__graph.pdf Graphic file (type pdf) @@ -1958,7 +1958,7 @@ Underfull \hbox (badness 10000) detected at line 235 pdfTeX warning: pdflatex (file ./class_d_e_f_m__inherit__graph.pdf): PDF inclus ion: multiple pdfs with page group included in a single page > - + File: class_d_e_f_m__inherit__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_d_e_f_m__inherit__graph.pdf used on input line @@ -1969,20 +1969,20 @@ Package pdftex.def Info: class_d_e_f_m__inherit__graph.pdf used on input line pdfTeX warning: pdflatex (file ./class_d_e_f_m__coll__graph.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: class_d_e_f_m__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_d_e_f_m__coll__graph.pdf used on input line 24. (pdftex.def) Requested size: 150.0pt x 156.01357pt. - [139] [140] [141] [142] [143]) (./class_d_e_f_m_counter_data.tex) + [139] [140] [141] [142]) (./class_d_e_f_m_counter_data.tex [143]) (./class_d_e_f_m_data.tex [144]) (./class_d_e_f_m_rule_data.tex <./class_d_e_f_ m_rule_data__inherit__graph.pdf pdfTeX warning: pdflatex (file ./class_d_e_f_m_rule_data__inherit__graph.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: class_d_e_f_m_rule_data__inherit__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_d_e_f_m_rule_data__inherit__graph.pdf used on i @@ -1994,7 +1994,7 @@ rit__graph.pdf pdfTeX warning: pdflatex (file ./class_d_e_f_m_rule_dyn_data__inherit__graph.pd f): PDF inclusion: multiple pdfs with page group included in a single page > - File: class_d_e_f_m_rule_dyn_data__inherit__graph.pdf Graphic file (type pdf) @@ -2002,7 +2002,7 @@ Package pdftex.def Info: class_d_e_f_m_rule_dyn_data__inherit__graph.pdf used on input line 14. (pdftex.def) Requested size: 180.0pt x 156.00162pt. [146] <./class_d_e_f_m_rule_dyn_data__coll__graph.pdf> - + File: class_d_e_f_m_rule_dyn_data__coll__graph.pdf Graphic file (type pdf) @@ -2117,7 +2117,7 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): pdfTeX warning: pdflatex (file ./class_model__coll__graph.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: class_model__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_model__coll__graph.pdf used on input line 19. @@ -3105,7 +3105,7 @@ h[]_[]pset = pdfTeX warning: pdflatex (file ./class_node__coll__graph.pdf): PDF inclusion: m ultiple pdfs with page group included in a single page > - + File: class_node__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_node__coll__graph.pdf used on input line 19. @@ -3134,7 +3134,7 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): pdfTeX warning: pdflatex (file ./class_power_set__coll__graph.pdf): PDF inclusi on: multiple pdfs with page group included in a single page > - + File: class_power_set__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_power_set__coll__graph.pdf used on input line 1 @@ -3505,7 +3505,7 @@ Chapter 9. pdfTeX warning: pdflatex (file ./barray-bones_8hpp__dep__incl.pdf): PDF inclusi on: multiple pdfs with page group included in a single page > - + File: barray-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barray-bones_8hpp__dep__incl.pdf used on input line 8 @@ -3517,7 +3517,7 @@ Package pdftex.def Info: barray-bones_8hpp__dep__incl.pdf used on input line 8 pdfTeX warning: pdflatex (file ./barray-meat-operators_8hpp__dep__incl.pdf): PD F inclusion: multiple pdfs with page group included in a single page > - File: barray-meat-operators_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -3530,7 +3530,7 @@ l.pdf pdfTeX warning: pdflatex (file ./barray-meat_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: barray-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barray-meat_8hpp__dep__incl.pdf used on input line 8. @@ -3538,7 +3538,7 @@ Package pdftex.def Info: barray-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. [249] [250]) (./barraycell-bones_8hpp.tex <./barraycell-bones_8hpp__dep__incl. pdf> - + File: barraycell-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraycell-bones_8hpp__dep__incl.pdf used on input li @@ -3549,14 +3549,14 @@ ne 8. pdfTeX warning: pdflatex (file ./barraycell-meat_8hpp__dep__incl.pdf): PDF incl usion: multiple pdfs with page group included in a single page > - + File: barraycell-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraycell-meat_8hpp__dep__incl.pdf used on input lin e 8. (pdftex.def) Requested size: 196.0pt x 166.99916pt. ) (./barraydense-bones_8hpp.tex [251] <./barraydense-bones_8hpp__dep__incl.pdf> - + File: barraydense-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydense-bones_8hpp__dep__incl.pdf used on input l @@ -3568,7 +3568,7 @@ p__incl.pdf pdfTeX warning: pdflatex (file ./barraydense-meat-operators_8hpp__dep__incl.pdf ): PDF inclusion: multiple pdfs with page group included in a single page > - File: barraydense-meat-operators_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -3581,7 +3581,7 @@ _incl.pdf pdfTeX warning: pdflatex (file ./barraydense-meat_8hpp__dep__incl.pdf): PDF inc lusion: multiple pdfs with page group included in a single page > - + File: barraydense-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydense-meat_8hpp__dep__incl.pdf used on input li @@ -3589,7 +3589,7 @@ ne 8. (pdftex.def) Requested size: 207.0pt x 167.00684pt. [255] [256]) (./barraydensecell-bones_8hpp.tex <./barraydensecell-bones_8hpp__ dep__incl.pdf> - + File: barraydensecell-bones_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -3598,7 +3598,7 @@ ut line 8. (pdftex.def) Requested size: 222.0pt x 167.00172pt. [257]) (./barraydensecell-meat_8hpp.tex <./barraydensecell-meat_8hpp__dep__inc l.pdf> - + File: barraydensecell-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydensecell-meat_8hpp__dep__incl.pdf used on inpu @@ -3609,7 +3609,7 @@ t line 8. pdfTeX warning: pdflatex (file ./barraydensecol-bones_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: barraydensecol-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydensecol-bones_8hpp__dep__incl.pdf used on inpu @@ -3617,7 +3617,7 @@ t line 8. (pdftex.def) Requested size: 220.0pt x 167.00684pt. [258] [259]) (./barraydenserow-bones_8hpp.tex <./barraydenserow-bones_8hpp__de p__incl.pdf> - + File: barraydenserow-bones_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -3631,7 +3631,7 @@ t line 8. pdfTeX warning: pdflatex (file ./barry-configuration_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: barry-configuration_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry-configuration_8hpp__dep__incl.pdf used on input @@ -3646,7 +3646,7 @@ m/it/8 >$[]\T1/pcr/m/n/8 ::max() [] ) (./barry-debug_8hpp.tex <./barry-debug_8hpp__dep__incl.pdf> - + File: barry-debug_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry-debug_8hpp__dep__incl.pdf used on input line 8. @@ -3658,14 +3658,14 @@ Package pdftex.def Info: barry-debug_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./barry-macros_8hpp__dep__incl.pdf): PDF inclusi on: multiple pdfs with page group included in a single page > - + File: barry-macros_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry-macros_8hpp__dep__incl.pdf used on input line 8 . (pdftex.def) Requested size: 193.0pt x 167.00172pt. [266] [267]) (./barry_8hpp.tex <./barry_8hpp__incl.pdf> - + File: barry_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry_8hpp__incl.pdf used on input line 56. @@ -3676,7 +3676,7 @@ Package pdftex.def Info: barry_8hpp__incl.pdf used on input line 56. pdfTeX warning: pdflatex (file ./cell-bones_8hpp__dep__incl.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: cell-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: cell-bones_8hpp__dep__incl.pdf used on input line 8. @@ -3686,14 +3686,14 @@ Package pdftex.def Info: cell-bones_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./cell-meat_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: cell-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: cell-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. ) (./col-bones_8hpp.tex [271]) (./counters-bones_8hpp.tex <./counters-bones_8hp p__dep__incl.pdf> - + File: counters-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: counters-bones_8hpp__dep__incl.pdf used on input line @@ -3704,7 +3704,7 @@ Package pdftex.def Info: counters-bones_8hpp__dep__incl.pdf used on input line pdfTeX warning: pdflatex (file ./counters-meat_8hpp__dep__incl.pdf): PDF inclus ion: multiple pdfs with page group included in a single page > - + File: counters-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: counters-meat_8hpp__dep__incl.pdf used on input line @@ -3734,7 +3734,7 @@ pe,Data[]_[][]Type$\OML/cmm/m/it/8 >$ []$<$\T1/pcr/m/n/8 Array[]_[][]Type,Data[ pdfTeX warning: pdflatex (file ./network-css_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: network-css_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: network-css_8hpp__dep__incl.pdf used on input line 8. @@ -3746,7 +3746,7 @@ k_8hpp__incl.pdf pdfTeX warning: pdflatex (file ./network_8hpp__incl.pdf): PDF inclusion: multip le pdfs with page group included in a single page > - + File: network_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: network_8hpp__incl.pdf used on input line 9. @@ -3756,7 +3756,7 @@ Package pdftex.def Info: network_8hpp__incl.pdf used on input line 9. pdfTeX warning: pdflatex (file ./network_8hpp__dep__incl.pdf): PDF inclusion: m ultiple pdfs with page group included in a single page > - + File: network_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: network_8hpp__dep__incl.pdf used on input line 17. @@ -3767,7 +3767,7 @@ Package pdftex.def Info: network_8hpp__dep__incl.pdf used on input line 17. pdfTeX warning: pdflatex (file ./freqtable_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: freqtable_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: freqtable_8hpp__dep__incl.pdf used on input line 8. @@ -3777,14 +3777,14 @@ Package pdftex.def Info: freqtable_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./model-bones_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: model-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: model-bones_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. [300]) (./model-meat_8hpp.tex <./model-meat_8hpp__dep__incl.pdf> - + File: model-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: model-meat_8hpp__dep__incl.pdf used on input line 8. @@ -3809,7 +3809,7 @@ pdf pdfTeX warning: pdflatex (file ./defm_8hpp__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: defm_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm_8hpp__incl.pdf used on input line 14. @@ -3819,13 +3819,13 @@ Package pdftex.def Info: defm_8hpp__incl.pdf used on input line 14. pdfTeX warning: pdflatex (file ./defm_2counters_8hpp__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: defm_2counters_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm_2counters_8hpp__incl.pdf used on input line 9. (pdftex.def) Requested size: 186.0pt x 167.00684pt. [319] <./defm_2counters_8hpp__dep__incl.pdf> - + File: defm_2counters_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm_2counters_8hpp__dep__incl.pdf used on input line @@ -3843,7 +3843,7 @@ cl.pdf pdfTeX warning: pdflatex (file ./geese_2counters_8hpp__dep__incl.pdf): PDF incl usion: multiple pdfs with page group included in a single page > - + File: geese_2counters_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese_2counters_8hpp__dep__incl.pdf used on input lin @@ -3941,7 +3941,7 @@ t nfunA, size[]_[]t nfunB, size[]_[] pdfTeX warning: pdflatex (file ./defm-bones_8hpp__dep__incl.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: defm-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm-bones_8hpp__dep__incl.pdf used on input line 8. @@ -3951,13 +3951,13 @@ Package pdftex.def Info: defm-bones_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./defm-meat_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: defm-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 189.0pt x 178.00456pt. [325] [326]) (./defm-types_8hpp.tex <./defm-types_8hpp__dep__incl.pdf> - + File: defm-types_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm-types_8hpp__dep__incl.pdf used on input line 8. @@ -3975,14 +3975,14 @@ Underfull \hbox (badness 4531) in paragraph at lines 38--40 [] [327]) (./formula_8hpp.tex <./formula_8hpp__dep__incl.pdf> - + File: formula_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: formula_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 186.0pt x 245.01004pt. [328]) (./geese_8hpp.tex <./geese_8hpp__incl.pdf> - + File: geese_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese_8hpp__incl.pdf used on input line 22. @@ -3992,7 +3992,7 @@ Package pdftex.def Info: geese_8hpp__incl.pdf used on input line 22. pdfTeX warning: pdflatex (file ./flock-bones_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: flock-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: flock-bones_8hpp__dep__incl.pdf used on input line 8. @@ -4003,13 +4003,13 @@ Package pdftex.def Info: flock-bones_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./flock-meat_8hpp__dep__incl.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: flock-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: flock-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 192.0pt x 177.99911pt. ) (./geese-bones_8hpp.tex [330] <./geese-bones_8hpp__dep__incl.pdf> - + File: geese-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-bones_8hpp__dep__incl.pdf used on input line 8. @@ -4022,7 +4022,7 @@ __incl.pdf pdfTeX warning: pdflatex (file ./geese-meat-constructors_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - File: geese-meat-constructors_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -4034,14 +4034,14 @@ nput line 8. pdfTeX warning: pdflatex (file ./geese-meat-likelihood_8hpp__incl.pdf): PDF inc lusion: multiple pdfs with page group included in a single page > - + File: geese-meat-likelihood_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-meat-likelihood_8hpp__incl.pdf used on input li ne 9. (pdftex.def) Requested size: 241.0pt x 167.00684pt. [333] <./geese-meat-likelihood_8hpp__dep__incl.pdf> - + File: geese-meat-likelihood_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -4055,7 +4055,7 @@ pp__dep__incl.pdf pdfTeX warning: pdflatex (file ./geese-meat-likelihood__exhaust_8hpp__dep__incl .pdf): PDF inclusion: multiple pdfs with page group included in a single page > - File: geese-meat-likelihood__exhaust_8hpp__dep__incl.pdf Graphic file (type pdf ) @@ -4065,7 +4065,7 @@ ed on input line 8. (pdftex.def) Requested size: 223.0pt x 189.00485pt. ) (./geese-meat-predict_8hpp.tex [334] <./geese-meat-predict_8hpp__dep__incl.pd f> - + File: geese-meat-predict_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-meat-predict_8hpp__dep__incl.pdf used on input @@ -4077,7 +4077,7 @@ dep__incl.pdf pdfTeX warning: pdflatex (file ./geese-meat-predict__exhaust_8hpp__dep__incl.pd f): PDF inclusion: multiple pdfs with page group included in a single page > - File: geese-meat-predict__exhaust_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -4086,7 +4086,7 @@ on input line 8. 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[337]) (./geese-types_8hpp.tex <./geese-types_8hpp__dep__incl.pdf> - + File: geese-types_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-types_8hpp__dep__incl.pdf used on input line 8. @@ -4146,7 +4146,7 @@ Overfull \hbox (23.5786pt too wide) in paragraph at lines 166--167 pdfTeX warning: pdflatex (file ./powerset-bones_8hpp__dep__incl.pdf): PDF inclu sion: multiple pdfs with page group included in a single page > - + File: powerset-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: powerset-bones_8hpp__dep__incl.pdf used on input line @@ -4157,21 +4157,21 @@ Package pdftex.def Info: powerset-bones_8hpp__dep__incl.pdf used on input line pdfTeX warning: pdflatex (file ./powerset-meat_8hpp__dep__incl.pdf): PDF inclus ion: multiple pdfs with page group included in a single page > - + File: powerset-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: powerset-meat_8hpp__dep__incl.pdf used on input line 8. 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_Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1518--1520 +Underfull \hbox (badness 3568) in paragraph at lines 1517--1519 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1526--1528 +Underfull \hbox (badness 10000) in paragraph at lines 1525--1527 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1526--1528 +Underfull \hbox (badness 3568) in paragraph at lines 1525--1527 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1530--1532 +Underfull \hbox (badness 10000) in paragraph at lines 1529--1531 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1530--1532 +Underfull \hbox 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Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1562--1564 +Underfull \hbox (badness 10000) in paragraph at lines 1561--1563 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1562--1564 +Underfull \hbox (badness 3568) in paragraph at lines 1561--1563 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1629--1631 +Underfull \hbox (badness 10000) in paragraph at lines 1628--1630 []\T1/phv/m/n/10 include/barry/models/geese/geese-meat-likelihood.hpp, [] -Overfull \hbox (34.30508pt too wide) in paragraph at lines 1631--1633 +Overfull \hbox (34.30508pt too wide) in paragraph at lines 1630--1632 []\T1/phv/m/n/10 include/barry/models/geese/geese-meat-likelihood_exhaust.hpp, [] -Underfull \hbox (badness 10000) in paragraph at lines 1633--1635 +Underfull \hbox (badness 10000) in paragraph at lines 1632--1634 []\T1/phv/m/n/10 include/barry/models/geese/geese-meat-predict.hpp, [] -Overfull \hbox (23.9822pt too wide) in paragraph at lines 1635--1637 +Overfull \hbox (23.9822pt too wide) in paragraph at lines 1634--1636 []\T1/phv/m/n/10 include/barry/models/geese/geese-meat-predict_exhaust.hpp, [] -Underfull \hbox (badness 10000) in paragraph at lines 1639--1641 +Underfull \hbox (badness 10000) in paragraph at lines 1638--1640 []\T1/phv/m/n/10 include/barry/models/geese/geese-meat-simulate.hpp, [] -Underfull \hbox (badness 10000) in paragraph at lines 1642--1644 +Underfull \hbox (badness 10000) in paragraph at lines 1641--1643 []\T1/phv/m/n/10 include/barry/models/geese/geese-node-bones.hpp, [] [382] -Underfull \hbox (badness 10000) in paragraph at lines 1677--1679 +Underfull \hbox (badness 10000) in paragraph at lines 1676--1678 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1677--1679 +Underfull \hbox (badness 3568) in paragraph at lines 1676--1678 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 1693--1695 +Underfull \hbox (badness 2088) in paragraph at lines 1692--1694 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 1715--1717 +Underfull \hbox (badness 2088) in paragraph at lines 1714--1716 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 1097) in paragraph at lines 1722--1724 +Underfull \hbox (badness 1097) in paragraph at lines 1721--1723 []| \T1/phv/m/n/10 ConstBArrayRowIter$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1743--1745 +Underfull \hbox (badness 10000) in paragraph at lines 1742--1744 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1743--1745 +Underfull \hbox (badness 3568) in paragraph at lines 1742--1744 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1753--1755 +Underfull \hbox (badness 10000) in paragraph at lines 1751--1753 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1753--1755 +Underfull \hbox (badness 3568) in paragraph at lines 1751--1753 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1762--1764 +Underfull \hbox (badness 10000) in paragraph at lines 1760--1762 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1762--1764 +Underfull \hbox (badness 3568) in paragraph at lines 1760--1762 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1776--1778 +Underfull \hbox (badness 10000) in paragraph at lines 1774--1776 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1776--1778 +Underfull \hbox (badness 3568) in paragraph at lines 1774--1776 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] [383] -Underfull \hbox (badness 10000) in paragraph at lines 1791--1793 +Underfull \hbox (badness 10000) in paragraph at lines 1789--1791 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1791--1793 +Underfull \hbox (badness 3568) in paragraph at lines 1789--1791 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1794--1796 +Underfull \hbox (badness 10000) in paragraph at lines 1792--1794 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1794--1796 +Underfull \hbox (badness 3568) in paragraph at lines 1792--1794 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] [384] -Underfull \hbox (badness 10000) in paragraph at lines 1929--1931 +Underfull \hbox (badness 10000) in paragraph at lines 1927--1929 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1929--1931 +Underfull \hbox (badness 3568) in paragraph at lines 1927--1929 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 1932--1934 +Underfull \hbox (badness 10000) in paragraph at lines 1930--1932 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 1932--1934 +Underfull \hbox (badness 3568) in paragraph at lines 1930--1932 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] [385] -Underfull \hbox (badness 10000) in paragraph at lines 2127--2129 +Underfull \hbox (badness 10000) in paragraph at lines 2125--2127 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2127--2129 +Underfull \hbox (badness 3568) in paragraph at lines 2125--2127 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2135--2137 +Underfull \hbox (badness 10000) in paragraph at lines 2133--2135 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2135--2137 +Underfull \hbox (badness 3568) in paragraph at lines 2133--2135 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -[386] -Underfull \hbox (badness 10000) in paragraph at lines 2138--2140 + +Underfull \hbox (badness 10000) in paragraph at lines 2136--2138 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2138--2140 +Underfull \hbox (badness 3568) in paragraph at lines 2136--2138 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] - -Underfull \hbox (badness 10000) in paragraph at lines 2143--2145 +[386] +Underfull \hbox (badness 10000) in paragraph at lines 2141--2143 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2143--2145 +Underfull \hbox (badness 3568) in paragraph at lines 2141--2143 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2179--2181 +Underfull \hbox (badness 2088) in paragraph at lines 2177--2179 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2186--2188 +Underfull \hbox (badness 2088) in paragraph at lines 2184--2186 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2194--2196 +Underfull \hbox (badness 2088) in paragraph at lines 2192--2194 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2201--2203 +Underfull \hbox (badness 2088) in paragraph at lines 2199--2201 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2208--2210 +Underfull \hbox (badness 2088) in paragraph at lines 2206--2208 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2215--2217 +Underfull \hbox (badness 2088) in paragraph at lines 2213--2215 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 1142) in paragraph at lines 2238--2240 +Underfull \hbox (badness 1142) in paragraph at lines 2236--2238 []| \T1/phv/m/n/10 BArrayDenseRow_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell _Type, Data_Type [] [387] -Underfull \hbox (badness 10000) in paragraph at lines 2292--2294 +Underfull \hbox (badness 10000) in paragraph at lines 2290--2292 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2292--2294 +Underfull \hbox (badness 3568) in paragraph at lines 2290--2292 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2309--2311 +Underfull \hbox (badness 2088) in paragraph at lines 2307--2309 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2329--2331 +Underfull \hbox (badness 10000) in paragraph at lines 2327--2329 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2329--2331 +Underfull \hbox (badness 3568) in paragraph at lines 2327--2329 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] [388] -Underfull \hbox (badness 10000) in paragraph at lines 2512--2514 +Underfull \hbox (badness 10000) in paragraph at lines 2510--2512 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2512--2514 +Underfull \hbox (badness 3568) in paragraph at lines 2510--2512 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2515--2517 +Underfull \hbox (badness 10000) in paragraph at lines 2513--2515 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2515--2517 +Underfull \hbox (badness 3568) in paragraph at lines 2513--2515 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2524--2526 +Underfull \hbox (badness 10000) in paragraph at lines 2522--2524 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2524--2526 +Underfull \hbox (badness 3568) in paragraph at lines 2522--2524 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] [389] -Underfull \hbox (badness 10000) in paragraph at lines 2540--2542 +Underfull \hbox (badness 10000) in paragraph at lines 2538--2540 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2540--2542 +Underfull \hbox (badness 3568) in paragraph at lines 2538--2540 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2546--2548 +Underfull \hbox (badness 10000) in paragraph at lines 2544--2546 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2546--2548 +Underfull \hbox (badness 3568) in paragraph at lines 2544--2546 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2549--2551 +Underfull \hbox (badness 10000) in paragraph at lines 2547--2549 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2549--2551 +Underfull \hbox (badness 3568) in paragraph at lines 2547--2549 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2564--2566 +Underfull \hbox (badness 10000) in paragraph at lines 2562--2564 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2564--2566 +Underfull \hbox (badness 3568) in paragraph at lines 2562--2564 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2580--2582 +Underfull \hbox (badness 10000) in paragraph at lines 2578--2580 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2580--2582 +Underfull \hbox 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                                                                                                                                                                                    • include
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                                                                                                                                                                                    • model-meat.hpp
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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                                                                                                                                                                                    • CHECK
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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                                                                                                                                                                                    • EXISTS
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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                                                                                                                                                                                    • include
                                                                                                                                                                                    • barry
                                                                                                                                                                                    • counters
                                                                                                                                                                                    • network-css.hpp
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                    diff --git a/network-css_8hpp_source.html b/network-css_8hpp_source.html index d29db9d50..f664d4951 100644 --- a/network-css_8hpp_source.html +++ b/network-css_8hpp_source.html @@ -874,7 +874,7 @@ diff --git a/network_8hpp.html b/network_8hpp.html index 97113d131..64ee3c395 100644 --- a/network_8hpp.html +++ b/network_8hpp.html @@ -683,7 +683,7 @@

                                                                                                                                                                                    • include
                                                                                                                                                                                    • barry
                                                                                                                                                                                    • counters
                                                                                                                                                                                    • network.hpp
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                    diff --git a/network_8hpp_source.html b/network_8hpp_source.html index 57c69d26e..8fd2b2d2b 100644 --- a/network_8hpp_source.html +++ b/network_8hpp_source.html @@ -1497,7 +1497,7 @@ diff --git a/powerset-bones_8hpp.html b/powerset-bones_8hpp.html index 10a3a3d68..5181f18b9 100644 --- a/powerset-bones_8hpp.html +++ b/powerset-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/powerset-bones_8hpp_source.html b/powerset-bones_8hpp_source.html index cd61d5f36..9feb41ffb 100644 --- a/powerset-bones_8hpp_source.html +++ b/powerset-bones_8hpp_source.html @@ -188,7 +188,7 @@ diff --git a/powerset-meat_8hpp.html b/powerset-meat_8hpp.html index e1b4e2f72..c8be41857 100644 --- a/powerset-meat_8hpp.html +++ b/powerset-meat_8hpp.html @@ -113,7 +113,7 @@ diff --git a/powerset-meat_8hpp_source.html b/powerset-meat_8hpp_source.html index b7c69ec52..230fe5d94 100644 --- a/powerset-meat_8hpp_source.html +++ b/powerset-meat_8hpp_source.html @@ -317,7 +317,7 @@ diff --git a/progress_8hpp.html b/progress_8hpp.html index 7b1971ffe..9e04b5671 100644 --- a/progress_8hpp.html +++ b/progress_8hpp.html @@ -146,7 +146,7 @@

                                                                                                                                                                                    • include
                                                                                                                                                                                    • barry
                                                                                                                                                                                    • progress.hpp
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                    diff --git a/progress_8hpp_source.html b/progress_8hpp_source.html index 4795a4bb5..34fdb8cd3 100644 --- a/progress_8hpp_source.html +++ b/progress_8hpp_source.html @@ -164,7 +164,7 @@ diff --git a/rules-bones_8hpp.html b/rules-bones_8hpp.html index 610b7340b..9e7fa6437 100644 --- a/rules-bones_8hpp.html +++ b/rules-bones_8hpp.html @@ -177,7 +177,7 @@

                                                                                                                                                                                    • include
                                                                                                                                                                                    • barry
                                                                                                                                                                                    • rules-bones.hpp
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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                                                                                                                                                                                    • include
                                                                                                                                                                                    • barry
                                                                                                                                                                                    • statscounter-meat.hpp
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:42 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                    diff --git a/statscounter-meat_8hpp_source.html b/statscounter-meat_8hpp_source.html index f510c4d6b..2cc65f213 100644 --- a/statscounter-meat_8hpp_source.html +++ b/statscounter-meat_8hpp_source.html @@ -385,7 +385,7 @@ diff --git a/structvec_hasher-members.html b/structvec_hasher-members.html index f0d074f0d..1726e3679 100644 --- a/structvec_hasher-members.html +++ b/structvec_hasher-members.html @@ -105,7 +105,7 @@ diff --git a/structvec_hasher.html b/structvec_hasher.html index fc520b575..311354cb3 100644 --- a/structvec_hasher.html +++ b/structvec_hasher.html @@ -153,7 +153,7 @@

                                                                                                                                                                                    • vecHasher
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                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                    diff --git a/support-bones_8hpp.html b/support-bones_8hpp.html index 032ee05dc..f7c86f3e6 100644 --- a/support-bones_8hpp.html +++ b/support-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/support-bones_8hpp_source.html b/support-bones_8hpp_source.html index ccf475258..dff1fe986 100644 --- a/support-bones_8hpp_source.html +++ b/support-bones_8hpp_source.html @@ -297,7 +297,7 @@ diff --git a/support-meat_8hpp.html b/support-meat_8hpp.html index e92f874fd..3bf73abd4 100644 --- a/support-meat_8hpp.html +++ b/support-meat_8hpp.html @@ -1436,7 +1436,7 @@

                                                                                                                                                                                    • include
                                                                                                                                                                                    • barry
                                                                                                                                                                                    • support-meat.hpp
                                                                                                                                                                                      • -
                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                      • +
                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                    diff --git a/support-meat_8hpp_source.html b/support-meat_8hpp_source.html index 581157b33..0d28be397 100644 --- a/support-meat_8hpp_source.html +++ b/support-meat_8hpp_source.html @@ -725,7 +725,7 @@ diff --git a/typedefs_8hpp.html b/typedefs_8hpp.html index acb09276f..55292dfb5 100644 --- a/typedefs_8hpp.html +++ b/typedefs_8hpp.html @@ -624,7 +624,7 @@

                                                                                                                                                                                    • include
                                                                                                                                                                                    • barry
                                                                                                                                                                                    • typedefs.hpp
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                                                                                                                                                                                    • Generated on Tue Sep 19 2023 19:46:43 for barry: Your go-to motif accountant by doxygen 1.9.1
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                                                                                                                                                                                    • Generated on Fri Sep 22 2023 22:26:43 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                                                    diff --git a/typedefs_8hpp_source.html b/typedefs_8hpp_source.html index 2ebf50b06..1f1a70043 100644 --- a/typedefs_8hpp_source.html +++ b/typedefs_8hpp_source.html @@ -415,7 +415,7 @@