diff --git a/_r_e_a_d_m_e_8md.html b/_r_e_a_d_m_e_8md.html index 295368d05..65e85443f 100644 --- a/_r_e_a_d_m_e_8md.html +++ b/_r_e_a_d_m_e_8md.html @@ -102,7 +102,7 @@ diff --git a/annotated.html b/annotated.html index c20321c95..fc1ac884e 100644 --- a/annotated.html +++ b/annotated.html @@ -147,7 +147,7 @@ diff --git a/barray-bones_8hpp.html b/barray-bones_8hpp.html index 04dff3af7..726b6881f 100644 --- a/barray-bones_8hpp.html +++ b/barray-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/barray-bones_8hpp_source.html b/barray-bones_8hpp_source.html index 0171e4439..4720fc436 100644 --- a/barray-bones_8hpp_source.html +++ b/barray-bones_8hpp_source.html @@ -328,7 +328,7 @@ diff --git a/barray-iterator_8hpp.html b/barray-iterator_8hpp.html index f72ea7832..cc8fb7ec6 100644 --- a/barray-iterator_8hpp.html +++ b/barray-iterator_8hpp.html @@ -112,7 +112,7 @@ diff --git a/barray-iterator_8hpp_source.html b/barray-iterator_8hpp_source.html index a0f7d32b1..102ed32e8 100644 --- a/barray-iterator_8hpp_source.html +++ b/barray-iterator_8hpp_source.html @@ -148,7 +148,7 @@ diff --git a/barray-meat-operators_8hpp.html b/barray-meat-operators_8hpp.html index ee9a2899e..208f611c3 100644 --- a/barray-meat-operators_8hpp.html +++ b/barray-meat-operators_8hpp.html @@ -576,7 +576,7 @@

diff --git a/barray-meat-operators_8hpp_source.html b/barray-meat-operators_8hpp_source.html index f4afe7507..e599a4835 100644 --- a/barray-meat-operators_8hpp_source.html +++ b/barray-meat-operators_8hpp_source.html @@ -240,7 +240,7 @@ diff --git a/barray-meat_8hpp.html b/barray-meat_8hpp.html index 08a571780..46c840ce7 100644 --- a/barray-meat_8hpp.html +++ b/barray-meat_8hpp.html @@ -164,7 +164,7 @@

  • include
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    • -
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    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barray-meat_8hpp_source.html b/barray-meat_8hpp_source.html index 87ef7c744..2f5a7dbbb 100644 --- a/barray-meat_8hpp_source.html +++ b/barray-meat_8hpp_source.html @@ -1441,7 +1441,7 @@ diff --git a/barraycell-bones_8hpp.html b/barraycell-bones_8hpp.html index 2292bbf4e..5384ce36b 100644 --- a/barraycell-bones_8hpp.html +++ b/barraycell-bones_8hpp.html @@ -123,7 +123,7 @@ diff --git a/barraycell-bones_8hpp_source.html b/barraycell-bones_8hpp_source.html index 5558e7bf8..b7035347e 100644 --- a/barraycell-bones_8hpp_source.html +++ b/barraycell-bones_8hpp_source.html @@ -204,7 +204,7 @@ diff --git a/barraycell-meat_8hpp.html b/barraycell-meat_8hpp.html index 40da3454d..8a584f197 100644 --- a/barraycell-meat_8hpp.html +++ b/barraycell-meat_8hpp.html @@ -113,7 +113,7 @@ diff --git a/barraycell-meat_8hpp_source.html b/barraycell-meat_8hpp_source.html index 1ded8ca31..7fbe5e3b8 100644 --- a/barraycell-meat_8hpp_source.html +++ b/barraycell-meat_8hpp_source.html @@ -220,7 +220,7 @@ diff --git a/barraydense-bones_8hpp.html b/barraydense-bones_8hpp.html index fef154694..14712f268 100644 --- a/barraydense-bones_8hpp.html +++ b/barraydense-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/barraydense-bones_8hpp_source.html b/barraydense-bones_8hpp_source.html index e6c934ea2..f5f19cad2 100644 --- a/barraydense-bones_8hpp_source.html +++ b/barraydense-bones_8hpp_source.html @@ -340,7 +340,7 @@ diff --git a/barraydense-meat-operators_8hpp.html b/barraydense-meat-operators_8hpp.html index 4417a8148..fb45c1474 100644 --- a/barraydense-meat-operators_8hpp.html +++ b/barraydense-meat-operators_8hpp.html @@ -481,7 +481,7 @@

  • include
  • barry
  • barraydense-meat-operators.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydense-meat-operators_8hpp_source.html b/barraydense-meat-operators_8hpp_source.html index f4ce52b1a..4d47c5d5f 100644 --- a/barraydense-meat-operators_8hpp_source.html +++ b/barraydense-meat-operators_8hpp_source.html @@ -231,7 +231,7 @@ diff --git a/barraydense-meat_8hpp.html b/barraydense-meat_8hpp.html index e2937de57..c8c91ba7c 100644 --- a/barraydense-meat_8hpp.html +++ b/barraydense-meat_8hpp.html @@ -252,7 +252,7 @@

  • include
  • barry
  • barraydense-meat.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydense-meat_8hpp_source.html b/barraydense-meat_8hpp_source.html index 95db75864..e02cfeabc 100644 --- a/barraydense-meat_8hpp_source.html +++ b/barraydense-meat_8hpp_source.html @@ -1190,7 +1190,7 @@ diff --git a/barraydensecell-bones_8hpp.html b/barraydensecell-bones_8hpp.html index bcd9916fa..4b9a519fc 100644 --- a/barraydensecell-bones_8hpp.html +++ b/barraydensecell-bones_8hpp.html @@ -158,7 +158,7 @@

  • include
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    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydensecell-bones_8hpp_source.html b/barraydensecell-bones_8hpp_source.html index a2f25267a..0fe7ac041 100644 --- a/barraydensecell-bones_8hpp_source.html +++ b/barraydensecell-bones_8hpp_source.html @@ -189,7 +189,7 @@ diff --git a/barraydensecell-meat_8hpp.html b/barraydensecell-meat_8hpp.html index 4458e0870..7f44535c2 100644 --- a/barraydensecell-meat_8hpp.html +++ b/barraydensecell-meat_8hpp.html @@ -152,7 +152,7 @@

  • include
  • barry
  • barraydensecell-meat.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydensecell-meat_8hpp_source.html b/barraydensecell-meat_8hpp_source.html index 04e1f390d..ea1d50477 100644 --- a/barraydensecell-meat_8hpp_source.html +++ b/barraydensecell-meat_8hpp_source.html @@ -235,7 +235,7 @@ diff --git a/barraydensecol-bones_8hpp.html b/barraydensecol-bones_8hpp.html index 811a32bdc..e6bb030c9 100644 --- a/barraydensecol-bones_8hpp.html +++ b/barraydensecol-bones_8hpp.html @@ -216,7 +216,7 @@

  • include
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  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydensecol-bones_8hpp_source.html b/barraydensecol-bones_8hpp_source.html index 89018765f..bf507b639 100644 --- a/barraydensecol-bones_8hpp_source.html +++ b/barraydensecol-bones_8hpp_source.html @@ -246,7 +246,7 @@ diff --git a/barraydenserow-bones_8hpp.html b/barraydenserow-bones_8hpp.html index 7d47d10b7..3b5cfad6a 100644 --- a/barraydenserow-bones_8hpp.html +++ b/barraydenserow-bones_8hpp.html @@ -216,7 +216,7 @@

  • include
  • barry
  • barraydenserow-bones.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barraydenserow-bones_8hpp_source.html b/barraydenserow-bones_8hpp_source.html index 8b4caef7e..c1229e7b2 100644 --- a/barraydenserow-bones_8hpp_source.html +++ b/barraydenserow-bones_8hpp_source.html @@ -257,7 +257,7 @@ diff --git a/barrayrow-bones_8hpp.html b/barrayrow-bones_8hpp.html index d90c09897..4d2604589 100644 --- a/barrayrow-bones_8hpp.html +++ b/barrayrow-bones_8hpp.html @@ -114,7 +114,7 @@ diff --git a/barrayrow-bones_8hpp_source.html b/barrayrow-bones_8hpp_source.html index e23c193bf..0a30d6d84 100644 --- a/barrayrow-bones_8hpp_source.html +++ b/barrayrow-bones_8hpp_source.html @@ -195,7 +195,7 @@ diff --git a/barrayrow-meat_8hpp.html b/barrayrow-meat_8hpp.html index f057d0b22..8affc28e7 100644 --- a/barrayrow-meat_8hpp.html +++ b/barrayrow-meat_8hpp.html @@ -350,7 +350,7 @@

  • include
  • barry
  • barrayrow-meat.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barrayrow-meat_8hpp_source.html b/barrayrow-meat_8hpp_source.html index 58777038c..a424cb7a5 100644 --- a/barrayrow-meat_8hpp_source.html +++ b/barrayrow-meat_8hpp_source.html @@ -229,7 +229,7 @@ diff --git a/barrayvector-bones_8hpp.html b/barrayvector-bones_8hpp.html index f2cc9f73f..934ed0518 100644 --- a/barrayvector-bones_8hpp.html +++ b/barrayvector-bones_8hpp.html @@ -115,7 +115,7 @@ diff --git a/barrayvector-bones_8hpp_source.html b/barrayvector-bones_8hpp_source.html index 3c59619e9..8d72af9fd 100644 --- a/barrayvector-bones_8hpp_source.html +++ b/barrayvector-bones_8hpp_source.html @@ -232,7 +232,7 @@ diff --git a/barrayvector-meat_8hpp.html b/barrayvector-meat_8hpp.html index 5b434d3d4..a33a8601a 100644 --- a/barrayvector-meat_8hpp.html +++ b/barrayvector-meat_8hpp.html @@ -104,7 +104,7 @@ diff --git a/barrayvector-meat_8hpp_source.html b/barrayvector-meat_8hpp_source.html index 0c804894a..29771b9a9 100644 --- a/barrayvector-meat_8hpp_source.html +++ b/barrayvector-meat_8hpp_source.html @@ -444,7 +444,7 @@ diff --git a/barry-configuration_8hpp.html b/barry-configuration_8hpp.html index a28308fce..e8461cdb5 100644 --- a/barry-configuration_8hpp.html +++ b/barry-configuration_8hpp.html @@ -257,7 +257,7 @@

  • include
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    • -
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  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barry-configuration_8hpp_source.html b/barry-configuration_8hpp_source.html index a9f37464e..056ef5699 100644 --- a/barry-configuration_8hpp_source.html +++ b/barry-configuration_8hpp_source.html @@ -160,7 +160,7 @@ diff --git a/barry-debug_8hpp.html b/barry-debug_8hpp.html index 8fc12488d..84cc091af 100644 --- a/barry-debug_8hpp.html +++ b/barry-debug_8hpp.html @@ -139,7 +139,7 @@

  • include
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diff --git a/barry-debug_8hpp_source.html b/barry-debug_8hpp_source.html index 03419e78e..f98201897 100644 --- a/barry-debug_8hpp_source.html +++ b/barry-debug_8hpp_source.html @@ -145,7 +145,7 @@ diff --git a/barry-macros_8hpp.html b/barry-macros_8hpp.html index 345dde937..7096f830e 100644 --- a/barry-macros_8hpp.html +++ b/barry-macros_8hpp.html @@ -236,7 +236,7 @@

  • include
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  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barry-macros_8hpp_source.html b/barry-macros_8hpp_source.html index 23fefa554..5120c93a3 100644 --- a/barry-macros_8hpp_source.html +++ b/barry-macros_8hpp_source.html @@ -121,7 +121,7 @@ diff --git a/barry_8hpp.html b/barry_8hpp.html index eec407b82..6d08fa0f2 100644 --- a/barry_8hpp.html +++ b/barry_8hpp.html @@ -401,7 +401,7 @@

  • include
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  • barry.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
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  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/barry_8hpp_source.html b/barry_8hpp_source.html index 475a9ddb2..f0f812974 100644 --- a/barry_8hpp_source.html +++ b/barry_8hpp_source.html @@ -237,7 +237,7 @@ diff --git a/cell-bones_8hpp.html b/cell-bones_8hpp.html index ca1972e31..514958715 100644 --- a/cell-bones_8hpp.html +++ b/cell-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/cell-bones_8hpp_source.html b/cell-bones_8hpp_source.html index 25aa99698..cbbce5fb4 100644 --- a/cell-bones_8hpp_source.html +++ b/cell-bones_8hpp_source.html @@ -159,7 +159,7 @@ diff --git a/cell-meat_8hpp.html b/cell-meat_8hpp.html index a8a59fddd..2f4b3a579 100644 --- a/cell-meat_8hpp.html +++ b/cell-meat_8hpp.html @@ -113,7 +113,7 @@ diff --git a/cell-meat_8hpp_source.html b/cell-meat_8hpp_source.html index 98d1e30e1..ea8291c4d 100644 --- a/cell-meat_8hpp_source.html +++ b/cell-meat_8hpp_source.html @@ -180,7 +180,7 @@ diff --git a/class_b_array-members.html b/class_b_array-members.html index fe5bd87ee..9e4518bf4 100644 --- a/class_b_array-members.html +++ b/class_b_array-members.html @@ -165,7 +165,7 @@ diff --git a/class_b_array.html b/class_b_array.html index 1589bbb75..a4a433b91 100644 --- a/class_b_array.html +++ b/class_b_array.html @@ -2141,7 +2141,7 @@

  • BArray
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diff --git a/class_b_array_cell-members.html b/class_b_array_cell-members.html index 0e403cbbb..634215ae3 100644 --- a/class_b_array_cell-members.html +++ b/class_b_array_cell-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_cell.html b/class_b_array_cell.html index 50d47496b..ea54ee823 100644 --- a/class_b_array_cell.html +++ b/class_b_array_cell.html @@ -430,7 +430,7 @@

  • BArrayCell
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diff --git a/class_b_array_cell__const-members.html b/class_b_array_cell__const-members.html index 6e17514f4..98548df7d 100644 --- a/class_b_array_cell__const-members.html +++ b/class_b_array_cell__const-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_cell__const.html b/class_b_array_cell__const.html index 66e57cc5e..efb952fab 100644 --- a/class_b_array_cell__const.html +++ b/class_b_array_cell__const.html @@ -430,7 +430,7 @@

  • BArrayCell_const
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diff --git a/class_b_array_dense-members.html b/class_b_array_dense-members.html index f6d7644bd..51ce0f870 100644 --- a/class_b_array_dense-members.html +++ b/class_b_array_dense-members.html @@ -170,7 +170,7 @@ diff --git a/class_b_array_dense.html b/class_b_array_dense.html index 8d6c9946f..33042fd3b 100644 --- a/class_b_array_dense.html +++ b/class_b_array_dense.html @@ -2668,7 +2668,7 @@

  • BArrayDense
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diff --git a/class_b_array_dense_cell-members.html b/class_b_array_dense_cell-members.html index afd72bae8..36b0e3fb0 100644 --- a/class_b_array_dense_cell-members.html +++ b/class_b_array_dense_cell-members.html @@ -117,7 +117,7 @@ diff --git a/class_b_array_dense_cell.html b/class_b_array_dense_cell.html index 12e0a6318..ffa1a4f87 100644 --- a/class_b_array_dense_cell.html +++ b/class_b_array_dense_cell.html @@ -550,7 +550,7 @@

  • BArrayDenseCell
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  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
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diff --git a/class_b_array_dense_cell__const.html b/class_b_array_dense_cell__const.html index b59b9349e..f8b4626b1 100644 --- a/class_b_array_dense_cell__const.html +++ b/class_b_array_dense_cell__const.html @@ -111,7 +111,7 @@ diff --git a/class_b_array_dense_col-members.html b/class_b_array_dense_col-members.html index dc4e12b82..769d55a3f 100644 --- a/class_b_array_dense_col-members.html +++ b/class_b_array_dense_col-members.html @@ -112,7 +112,7 @@ diff --git a/class_b_array_dense_col.html b/class_b_array_dense_col.html index 923dcb44b..041d7d14b 100644 --- a/class_b_array_dense_col.html +++ b/class_b_array_dense_col.html @@ -379,7 +379,7 @@

  • BArrayDenseCol
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  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
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diff --git a/class_b_array_dense_col__const-members.html b/class_b_array_dense_col__const-members.html index 80c8e83ef..05600538a 100644 --- a/class_b_array_dense_col__const-members.html +++ b/class_b_array_dense_col__const-members.html @@ -111,7 +111,7 @@ diff --git a/class_b_array_dense_col__const.html b/class_b_array_dense_col__const.html index 358d055fe..5b91337a0 100644 --- a/class_b_array_dense_col__const.html +++ b/class_b_array_dense_col__const.html @@ -351,7 +351,7 @@

  • BArrayDenseCol_const
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diff --git a/class_b_array_dense_row-members.html b/class_b_array_dense_row-members.html index ff8c10b57..72e0b33a2 100644 --- a/class_b_array_dense_row-members.html +++ b/class_b_array_dense_row-members.html @@ -112,7 +112,7 @@ diff --git a/class_b_array_dense_row.html b/class_b_array_dense_row.html index 6580010c4..80cfb97f6 100644 --- a/class_b_array_dense_row.html +++ b/class_b_array_dense_row.html @@ -379,7 +379,7 @@

  • BArrayDenseRow
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diff --git a/class_b_array_dense_row__const-members.html b/class_b_array_dense_row__const-members.html index 13e19ea6d..95fcfce96 100644 --- a/class_b_array_dense_row__const-members.html +++ b/class_b_array_dense_row__const-members.html @@ -111,7 +111,7 @@ diff --git a/class_b_array_dense_row__const.html b/class_b_array_dense_row__const.html index c594aed59..e99cc2764 100644 --- a/class_b_array_dense_row__const.html +++ b/class_b_array_dense_row__const.html @@ -351,7 +351,7 @@

  • BArrayDenseRow_const
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diff --git a/class_b_array_row-members.html b/class_b_array_row-members.html index 8f87abd84..8995d1694 100644 --- a/class_b_array_row-members.html +++ b/class_b_array_row-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_row.html b/class_b_array_row.html index b7aa62d60..e44ef3dff 100644 --- a/class_b_array_row.html +++ b/class_b_array_row.html @@ -354,7 +354,7 @@

  • BArrayRow
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diff --git a/class_b_array_row__const-members.html b/class_b_array_row__const-members.html index af5a9dc06..d0f4c3899 100644 --- a/class_b_array_row__const-members.html +++ b/class_b_array_row__const-members.html @@ -113,7 +113,7 @@ diff --git a/class_b_array_row__const.html b/class_b_array_row__const.html index cf6fadf26..e60156f3f 100644 --- a/class_b_array_row__const.html +++ b/class_b_array_row__const.html @@ -354,7 +354,7 @@

  • BArrayRow_const
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_b_array_vector-members.html b/class_b_array_vector-members.html index 7de0c5c31..698f4ef75 100644 --- a/class_b_array_vector-members.html +++ b/class_b_array_vector-members.html @@ -118,7 +118,7 @@ diff --git a/class_b_array_vector.html b/class_b_array_vector.html index 91ff5f136..ea6655bc0 100644 --- a/class_b_array_vector.html +++ b/class_b_array_vector.html @@ -585,7 +585,7 @@

  • BArrayVector
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_b_array_vector__const-members.html b/class_b_array_vector__const-members.html index 9bff2da4c..c104b4ee1 100644 --- a/class_b_array_vector__const-members.html +++ b/class_b_array_vector__const-members.html @@ -118,7 +118,7 @@ diff --git a/class_b_array_vector__const.html b/class_b_array_vector__const.html index 1dfefa1a8..d15f76988 100644 --- a/class_b_array_vector__const.html +++ b/class_b_array_vector__const.html @@ -567,7 +567,7 @@

  • BArrayVector_const
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_cell-members.html b/class_cell-members.html index 518966d7a..f9f953993 100644 --- a/class_cell-members.html +++ b/class_cell-members.html @@ -124,7 +124,7 @@ diff --git a/class_cell.html b/class_cell.html index e217cce72..b4d8ccf18 100644 --- a/class_cell.html +++ b/class_cell.html @@ -695,7 +695,7 @@

  • Cell
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_cell__const.html b/class_cell__const.html index a6673b00d..691b50154 100644 --- a/class_cell__const.html +++ b/class_cell__const.html @@ -111,7 +111,7 @@ diff --git a/class_const_b_array_row_iter-members.html b/class_const_b_array_row_iter-members.html index b72b08a65..c6c21308d 100644 --- a/class_const_b_array_row_iter-members.html +++ b/class_const_b_array_row_iter-members.html @@ -110,7 +110,7 @@ diff --git a/class_const_b_array_row_iter.html b/class_const_b_array_row_iter.html index 87881f4e6..68210a7f3 100644 --- a/class_const_b_array_row_iter.html +++ b/class_const_b_array_row_iter.html @@ -278,7 +278,7 @@

  • ConstBArrayRowIter
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_counter-members.html b/class_counter-members.html index b5661e525..a1c771459 100644 --- a/class_counter-members.html +++ b/class_counter-members.html @@ -123,7 +123,7 @@ diff --git a/class_counter.html b/class_counter.html index d1ff4e167..d622cdd4a 100644 --- a/class_counter.html +++ b/class_counter.html @@ -679,7 +679,7 @@

  • Counter
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_counters-members.html b/class_counters-members.html index 8b34275ec..a1843727e 100644 --- a/class_counters-members.html +++ b/class_counters-members.html @@ -118,7 +118,7 @@ diff --git a/class_counters.html b/class_counters.html index 1c4e8a412..1ea4cf98f 100644 --- a/class_counters.html +++ b/class_counters.html @@ -573,7 +573,7 @@

  • Counters
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_d_e_f_m-members.html b/class_d_e_f_m-members.html index a325cec08..ba0c503ee 100644 --- a/class_d_e_f_m-members.html +++ b/class_d_e_f_m-members.html @@ -124,7 +124,7 @@ diff --git a/class_d_e_f_m.html b/class_d_e_f_m.html index cba15980c..0d6ea54db 100644 --- a/class_d_e_f_m.html +++ b/class_d_e_f_m.html @@ -811,7 +811,7 @@

  • DEFM
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_d_e_f_m_counter_data-members.html b/class_d_e_f_m_counter_data-members.html index 2f912fb33..bfaeda594 100644 --- a/class_d_e_f_m_counter_data-members.html +++ b/class_d_e_f_m_counter_data-members.html @@ -114,7 +114,7 @@ diff --git a/class_d_e_f_m_counter_data.html b/class_d_e_f_m_counter_data.html index 668fd998a..9a544d8d9 100644 --- a/class_d_e_f_m_counter_data.html +++ b/class_d_e_f_m_counter_data.html @@ -146,7 +146,7 @@ diff --git a/class_d_e_f_m_data-members.html b/class_d_e_f_m_data-members.html index 35c7d92f6..6bca7739e 100644 --- a/class_d_e_f_m_data-members.html +++ b/class_d_e_f_m_data-members.html @@ -119,7 +119,7 @@ diff --git a/class_d_e_f_m_data.html b/class_d_e_f_m_data.html index 67102cf3e..81e0ecbaa 100644 --- a/class_d_e_f_m_data.html +++ b/class_d_e_f_m_data.html @@ -164,7 +164,7 @@ diff --git a/class_d_e_f_m_rule_data-members.html b/class_d_e_f_m_rule_data-members.html index 8045ab701..d31e75035 100644 --- a/class_d_e_f_m_rule_data-members.html +++ b/class_d_e_f_m_rule_data-members.html @@ -114,7 +114,7 @@ diff --git a/class_d_e_f_m_rule_data.html b/class_d_e_f_m_rule_data.html index a8d5350c4..996f014e2 100644 --- a/class_d_e_f_m_rule_data.html +++ b/class_d_e_f_m_rule_data.html @@ -150,7 +150,7 @@ diff --git a/class_d_e_f_m_rule_dyn_data-members.html b/class_d_e_f_m_rule_dyn_data-members.html index a4aefbc64..78e2566d4 100644 --- a/class_d_e_f_m_rule_dyn_data-members.html +++ b/class_d_e_f_m_rule_dyn_data-members.html @@ -117,7 +117,7 @@ diff --git a/class_d_e_f_m_rule_dyn_data.html b/class_d_e_f_m_rule_dyn_data.html index cf074f476..0d04ddcc1 100644 --- a/class_d_e_f_m_rule_dyn_data.html +++ b/class_d_e_f_m_rule_dyn_data.html @@ -167,7 +167,7 @@ diff --git a/class_entries-members.html b/class_entries-members.html index 11e18297c..1afe1ea1e 100644 --- a/class_entries-members.html +++ b/class_entries-members.html @@ -111,7 +111,7 @@ diff --git a/class_entries.html b/class_entries.html index a20cb4a9d..3199b2470 100644 --- a/class_entries.html +++ b/class_entries.html @@ -323,7 +323,7 @@

  • Entries
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_flock-members.html b/class_flock-members.html index 8a2cc4939..f49f44cdc 100644 --- a/class_flock-members.html +++ b/class_flock-members.html @@ -130,7 +130,7 @@ diff --git a/class_flock.html b/class_flock.html index a91a5cac0..52b788aec 100644 --- a/class_flock.html +++ b/class_flock.html @@ -948,7 +948,7 @@

  • Flock
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_freq_table-members.html b/class_freq_table-members.html index 629b35c2a..8c3dc8d59 100644 --- a/class_freq_table-members.html +++ b/class_freq_table-members.html @@ -115,7 +115,7 @@ diff --git a/class_freq_table.html b/class_freq_table.html index 3c3295090..624c745e2 100644 --- a/class_freq_table.html +++ b/class_freq_table.html @@ -491,7 +491,7 @@

  • FreqTable
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_geese-members.html b/class_geese-members.html index 7f9303fc0..fad1b4ba6 100644 --- a/class_geese-members.html +++ b/class_geese-members.html @@ -159,7 +159,7 @@ diff --git a/class_geese.html b/class_geese.html index 7ab0ad077..f0354d2b0 100644 --- a/class_geese.html +++ b/class_geese.html @@ -1895,7 +1895,7 @@

  • Geese
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_model-members.html b/class_model-members.html index 46ad9e9d0..99bf9147f 100644 --- a/class_model-members.html +++ b/class_model-members.html @@ -130,6 +130,8 @@ get_rules()Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >inline get_rules_dyn()Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >inline get_stats_support()Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >inline + get_stats_support_sizes()Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >inline + get_stats_support_sizes_acc()Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >inline get_stats_target()Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >inline get_support_fun()Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >inline keys2supportModel< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >protected @@ -184,7 +186,7 @@ diff --git a/class_model.html b/class_model.html index c51d884f8..679e52ccb 100644 --- a/class_model.html +++ b/class_model.html @@ -256,7 +256,14 @@  Raw pointers to the support and target statistics. More...
  std::vector< double > * get_stats_support () + Sufficient statistics of the support(s) More...
  +std::vector< size_t > * get_stats_support_sizes () + Number of vectors included in the support. More...
+  +std::vector< size_t > * get_stats_support_sizes_acc () + Accumulated number of vectors included in the support. More...
+  std::vector< size_t > * get_arrays2support ()   std::vector< std::vector< Array_Type > > * get_pset_arrays () @@ -924,7 +931,7 @@

-

Definition at line 1558 of file model-meat.hpp.

+

Definition at line 1574 of file model-meat.hpp.

@@ -1032,7 +1039,7 @@

-

Definition at line 1565 of file model-meat.hpp.

+

Definition at line 1581 of file model-meat.hpp.

@@ -1058,7 +1065,7 @@

-

Definition at line 1577 of file model-meat.hpp.

+

Definition at line 1593 of file model-meat.hpp.

@@ -1086,7 +1093,7 @@

Definition at line 1571 of file model-meat.hpp.

+

Definition at line 1587 of file model-meat.hpp.

@@ -1220,8 +1227,66 @@

+

Sufficient statistics of the support(s)

+

Definition at line 1551 of file model-meat.hpp.

+ + + +

◆ get_stats_support_sizes()

+ +
+
+
+template<typename Array_Type , typename Data_Counter_Type , typename Data_Rule_Type , typename Data_Rule_Dyn_Type >
+ + + + + +
+ + + + +
std::vector< size_t > * Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >::get_stats_support_sizes
+ 		+inline
+
+ +

Number of vectors included in the support.

+ +

Definition at line 1559 of file model-meat.hpp.

+ +
+
+ +

◆ get_stats_support_sizes_acc()

+ +
+
+
+template<typename Array_Type , typename Data_Counter_Type , typename Data_Rule_Type , typename Data_Rule_Dyn_Type >
+ + + + + +
+ + + + +
std::vector< size_t > * Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >::get_stats_support_sizes_acc
+ 		+inline
+
+ +

Accumulated number of vectors included in the support.

+ +

Definition at line 1567 of file model-meat.hpp.

+
@@ -2012,7 +2077,7 @@

Definition at line 1583 of file model-meat.hpp.

+

Definition at line 1599 of file model-meat.hpp.

@@ -2899,7 +2964,7 @@

  • Model
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_model.js b/class_model.js index 3f7ee47ee..8ede5f545 100644 --- a/class_model.js +++ b/class_model.js @@ -27,6 +27,8 @@ var class_model = [ "get_rules", "class_model.html#a8796a5e54c0ba505129db2bc1e452d0d", null ], [ "get_rules_dyn", "class_model.html#aff4c85b28ba08c67b6d3308cf94fc30a", null ], [ "get_stats_support", "class_model.html#a689e68b499eb7bfd92a7f8318f51c121", null ], + [ "get_stats_support_sizes", "class_model.html#ad58c3af0e2785e39b43966d00b284ece", null ], + [ "get_stats_support_sizes_acc", "class_model.html#a0cc4d7632840ecdaeaf344b7839cec71", null ], [ "get_stats_target", "class_model.html#a5414f4d58c598c844bf0e7885e06488a", null ], [ "get_support_fun", "class_model.html#a5a887a9d87a1f86ccc783fd27a0a1ddc", null ], [ "likelihood", "class_model.html#a2b216befc5a05c5aa6607b9b617b14f6", null ], diff --git a/class_net_counter_data-members.html b/class_net_counter_data-members.html index 19799bcad..fc46047e9 100644 --- a/class_net_counter_data-members.html +++ b/class_net_counter_data-members.html @@ -109,7 +109,7 @@ diff --git a/class_net_counter_data.html b/class_net_counter_data.html index 86a1ee094..5d9722138 100644 --- a/class_net_counter_data.html +++ b/class_net_counter_data.html @@ -261,7 +261,7 @@

  • NetCounterData
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_network_data-members.html b/class_network_data-members.html index d3606ccb3..f8fd0efe5 100644 --- a/class_network_data-members.html +++ b/class_network_data-members.html @@ -110,7 +110,7 @@ diff --git a/class_network_data.html b/class_network_data.html index 317bd2795..ee68b260e 100644 --- a/class_network_data.html +++ b/class_network_data.html @@ -323,7 +323,7 @@

  • NetworkData
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_node-members.html b/class_node-members.html index 0b9f9b5f9..876036054 100644 --- a/class_node-members.html +++ b/class_node-members.html @@ -125,7 +125,7 @@ diff --git a/class_node.html b/class_node.html index f56e92f27..accf1c845 100644 --- a/class_node.html +++ b/class_node.html @@ -687,7 +687,7 @@

  • Node
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_node_data-members.html b/class_node_data-members.html index 7a032c1bb..470504712 100644 --- a/class_node_data-members.html +++ b/class_node_data-members.html @@ -108,7 +108,7 @@ diff --git a/class_node_data.html b/class_node_data.html index fd48418eb..1bcd82f62 100644 --- a/class_node_data.html +++ b/class_node_data.html @@ -230,7 +230,7 @@

  • NodeData
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
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diff --git a/class_phylo_counter_data-members.html b/class_phylo_counter_data-members.html index 351e6fa62..e21e73971 100644 --- a/class_phylo_counter_data-members.html +++ b/class_phylo_counter_data-members.html @@ -117,7 +117,7 @@ diff --git a/class_phylo_counter_data.html b/class_phylo_counter_data.html index 738ad7f95..1d3d71061 100644 --- a/class_phylo_counter_data.html +++ b/class_phylo_counter_data.html @@ -512,7 +512,7 @@

  • PhyloCounterData
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_phylo_rule_dyn_data-members.html b/class_phylo_rule_dyn_data-members.html index 68c9883c1..8416dc315 100644 --- a/class_phylo_rule_dyn_data-members.html +++ b/class_phylo_rule_dyn_data-members.html @@ -112,7 +112,7 @@ diff --git a/class_phylo_rule_dyn_data.html b/class_phylo_rule_dyn_data.html index b722884d8..729950348 100644 --- a/class_phylo_rule_dyn_data.html +++ b/class_phylo_rule_dyn_data.html @@ -330,7 +330,7 @@

  • PhyloRuleDynData
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_power_set-members.html b/class_power_set-members.html index 353d92eeb..413597325 100644 --- a/class_power_set-members.html +++ b/class_power_set-members.html @@ -129,7 +129,7 @@ diff --git a/class_power_set.html b/class_power_set.html index 1565989ed..a46d05b9f 100644 --- a/class_power_set.html +++ b/class_power_set.html @@ -845,7 +845,7 @@

  • PowerSet
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_progress-members.html b/class_progress-members.html index 4144aaaee..4364dc5d7 100644 --- a/class_progress-members.html +++ b/class_progress-members.html @@ -108,7 +108,7 @@ diff --git a/class_progress.html b/class_progress.html index f08f86adf..d925bb280 100644 --- a/class_progress.html +++ b/class_progress.html @@ -250,7 +250,7 @@

  • Progress
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_rule-members.html b/class_rule-members.html index 86035a560..3a517f040 100644 --- a/class_rule-members.html +++ b/class_rule-members.html @@ -113,7 +113,7 @@ diff --git a/class_rule.html b/class_rule.html index 1742521bc..4b756e14f 100644 --- a/class_rule.html +++ b/class_rule.html @@ -452,7 +452,7 @@

  • Rule
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_rules-members.html b/class_rules-members.html index 3c837232b..007674632 100644 --- a/class_rules-members.html +++ b/class_rules-members.html @@ -117,7 +117,7 @@ diff --git a/class_rules.html b/class_rules.html index af1b41e20..7a6f465f8 100644 --- a/class_rules.html +++ b/class_rules.html @@ -617,7 +617,7 @@

  • Rules
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_stats_counter-members.html b/class_stats_counter-members.html index f9505fdf7..ca8bfafe5 100644 --- a/class_stats_counter-members.html +++ b/class_stats_counter-members.html @@ -118,7 +118,7 @@ diff --git a/class_stats_counter.html b/class_stats_counter.html index dbe23a036..2dc978263 100644 --- a/class_stats_counter.html +++ b/class_stats_counter.html @@ -519,7 +519,7 @@

  • StatsCounter
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/class_support-members.html b/class_support-members.html index 30c61fd69..813150f6f 100644 --- a/class_support-members.html +++ b/class_support-members.html @@ -143,7 +143,7 @@ diff --git a/class_support.html b/class_support.html index cd0febc8f..97af7225e 100644 --- a/class_support.html +++ b/class_support.html @@ -1277,7 +1277,7 @@

  • Support
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/classes.html b/classes.html index 8305bc14c..94cc9c3cb 100644 --- a/classes.html +++ b/classes.html @@ -140,7 +140,7 @@ diff --git a/col-bones_8hpp.html b/col-bones_8hpp.html index 0e94983d9..ffa197f05 100644 --- a/col-bones_8hpp.html +++ b/col-bones_8hpp.html @@ -104,7 +104,7 @@ diff --git a/col-bones_8hpp_source.html b/col-bones_8hpp_source.html index 02c62f3d2..578554f9c 100644 --- a/col-bones_8hpp_source.html +++ b/col-bones_8hpp_source.html @@ -159,7 +159,7 @@ diff --git a/counters-bones_8hpp.html b/counters-bones_8hpp.html index f3bc2cae8..b3329a2e5 100644 --- a/counters-bones_8hpp.html +++ b/counters-bones_8hpp.html @@ -125,7 +125,7 @@ diff --git a/counters-bones_8hpp_source.html b/counters-bones_8hpp_source.html index 30a2dccf9..d6fde688b 100644 --- a/counters-bones_8hpp_source.html +++ b/counters-bones_8hpp_source.html @@ -258,7 +258,7 @@ diff --git a/counters-meat_8hpp.html b/counters-meat_8hpp.html index 717aecb37..c5f13b2ec 100644 --- a/counters-meat_8hpp.html +++ b/counters-meat_8hpp.html @@ -1560,7 +1560,7 @@

  • include
  • barry
  • counters-meat.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/counters-meat_8hpp_source.html b/counters-meat_8hpp_source.html index 6aa15ca66..b95fdff59 100644 --- a/counters-meat_8hpp_source.html +++ b/counters-meat_8hpp_source.html @@ -417,7 +417,7 @@ diff --git a/defm-bones_8hpp.html b/defm-bones_8hpp.html index 5ad0e71d0..a9935d632 100644 --- a/defm-bones_8hpp.html +++ b/defm-bones_8hpp.html @@ -121,7 +121,7 @@ diff --git a/defm-bones_8hpp_source.html b/defm-bones_8hpp_source.html index 7da9b2740..935456cdc 100644 --- a/defm-bones_8hpp_source.html +++ b/defm-bones_8hpp_source.html @@ -216,7 +216,7 @@ diff --git a/defm-meat_8hpp.html b/defm-meat_8hpp.html index c53ec921d..92a292cff 100644 --- a/defm-meat_8hpp.html +++ b/defm-meat_8hpp.html @@ -212,7 +212,7 @@

  • include
  • barry
  • models
  • defm
  • defm-meat.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/defm-meat_8hpp_source.html b/defm-meat_8hpp_source.html index 571298416..f0f19af0b 100644 --- a/defm-meat_8hpp_source.html +++ b/defm-meat_8hpp_source.html @@ -592,7 +592,7 @@ diff --git a/defm-types_8hpp.html b/defm-types_8hpp.html index 6ea961d0b..de0eddecd 100644 --- a/defm-types_8hpp.html +++ b/defm-types_8hpp.html @@ -171,7 +171,7 @@

  • include
  • barry
  • models
  • defm
  • defm-types.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/defm-types_8hpp_source.html b/defm-types_8hpp_source.html index 09a820695..316eaf605 100644 --- a/defm-types_8hpp_source.html +++ b/defm-types_8hpp_source.html @@ -305,7 +305,7 @@ diff --git a/defm_2counters_8hpp.html b/defm_2counters_8hpp.html index d256879e5..980f1af67 100644 --- a/defm_2counters_8hpp.html +++ b/defm_2counters_8hpp.html @@ -326,7 +326,7 @@

  • include
  • barry
  • models
  • defm
  • counters.hpp
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/defm_2counters_8hpp_source.html b/defm_2counters_8hpp_source.html index 7be1db211..7f22f598c 100644 --- a/defm_2counters_8hpp_source.html +++ b/defm_2counters_8hpp_source.html @@ -794,7 +794,7 @@ diff --git a/defm_8hpp.html b/defm_8hpp.html index 2b54f21c5..38ad32e4a 100644 --- a/defm_8hpp.html +++ b/defm_8hpp.html @@ -133,7 +133,7 @@ diff --git a/defm_8hpp_source.html b/defm_8hpp_source.html index 2cbdb19fe..e64d995d1 100644 --- a/defm_8hpp_source.html +++ b/defm_8hpp_source.html @@ -126,7 +126,7 @@ diff --git a/dir_000001_000002.html b/dir_000001_000002.html index a292ce06f..bd7f2c736 100644 --- a/dir_000001_000002.html +++ b/dir_000001_000002.html @@ -98,7 +98,7 @@

barry → counters Relation

diff --git a/dir_000003_000004.html b/dir_000003_000004.html index e53119bd1..61b7d0188 100644 --- a/dir_000003_000004.html +++ b/dir_000003_000004.html @@ -98,7 +98,7 @@

models → defm Relation

  • include
  • barry
  • models
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/dir_000003_000005.html b/dir_000003_000005.html index 466cf5708..a05861884 100644 --- a/dir_000003_000005.html +++ b/dir_000003_000005.html @@ -98,7 +98,7 @@

models → geese Relation

  • include
  • barry
  • models
    • -
  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
    • +
  • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
diff --git a/dir_488ec4010567cc6d95c62bdcb57a6d3e.html b/dir_488ec4010567cc6d95c62bdcb57a6d3e.html index 83a6e7369..d180b231a 100644 --- a/dir_488ec4010567cc6d95c62bdcb57a6d3e.html +++ b/dir_488ec4010567cc6d95c62bdcb57a6d3e.html @@ -130,7 +130,7 @@ diff --git a/dir_6e63e3665115632dc5d61b2d6d6c3354.html b/dir_6e63e3665115632dc5d61b2d6d6c3354.html index a7c86d72f..900822507 100644 --- a/dir_6e63e3665115632dc5d61b2d6d6c3354.html +++ b/dir_6e63e3665115632dc5d61b2d6d6c3354.html @@ -203,7 +203,7 @@ diff --git a/dir_b3150c389b0f5b078392750f1ae70361.html b/dir_b3150c389b0f5b078392750f1ae70361.html index 9d11675ad..d485785b4 100644 --- a/dir_b3150c389b0f5b078392750f1ae70361.html +++ b/dir_b3150c389b0f5b078392750f1ae70361.html @@ -110,7 +110,7 @@ diff --git a/dir_c5954a04c87570f0664da134464d5428.html b/dir_c5954a04c87570f0664da134464d5428.html index c5a8a4247..a9ae3f446 100644 --- a/dir_c5954a04c87570f0664da134464d5428.html +++ b/dir_c5954a04c87570f0664da134464d5428.html @@ -134,7 +134,7 @@ diff --git a/dir_d44c64559bbebec7f509842c48db8b23.html b/dir_d44c64559bbebec7f509842c48db8b23.html index 7f457658c..2a4ce066a 100644 --- a/dir_d44c64559bbebec7f509842c48db8b23.html +++ b/dir_d44c64559bbebec7f509842c48db8b23.html @@ -117,7 +117,7 @@ diff --git a/dir_d7a554d3e09ed8456d56450fe8436947.html b/dir_d7a554d3e09ed8456d56450fe8436947.html index 1398f6f94..6627bc4ae 100644 --- a/dir_d7a554d3e09ed8456d56450fe8436947.html +++ b/dir_d7a554d3e09ed8456d56450fe8436947.html @@ -116,7 +116,7 @@ diff --git a/files.html b/files.html index 93974096c..8ef2c356d 100644 --- a/files.html +++ b/files.html @@ -173,7 +173,7 @@ diff --git a/flock-bones_8hpp.html b/flock-bones_8hpp.html index 8c5097cb8..1ecdad449 100644 --- a/flock-bones_8hpp.html +++ b/flock-bones_8hpp.html @@ -122,7 +122,7 @@ diff --git a/flock-bones_8hpp_source.html b/flock-bones_8hpp_source.html index e5d309135..2b7c72d90 100644 --- a/flock-bones_8hpp_source.html +++ b/flock-bones_8hpp_source.html @@ -197,7 +197,7 @@ diff --git a/flock-meat_8hpp.html b/flock-meat_8hpp.html index a989ea8df..9cf893dae 100644 --- a/flock-meat_8hpp.html +++ b/flock-meat_8hpp.html @@ -113,7 +113,7 @@ diff --git a/flock-meat_8hpp_source.html b/flock-meat_8hpp_source.html index d71d8474b..25d05bbb8 100644 --- a/flock-meat_8hpp_source.html +++ b/flock-meat_8hpp_source.html @@ -474,7 +474,7 @@ diff --git a/formula_8hpp.html b/formula_8hpp.html index f7173cb9b..f9d7da418 100644 --- a/formula_8hpp.html +++ b/formula_8hpp.html @@ -206,7 +206,7 @@

Transition effects

diff --git a/formula_8hpp_source.html b/formula_8hpp_source.html index 76c84c820..4b34dea17 100644 --- a/formula_8hpp_source.html +++ b/formula_8hpp_source.html @@ -288,7 +288,7 @@ diff --git a/freqtable_8hpp.html b/freqtable_8hpp.html index f53d3673a..ea6183c9b 100644 --- a/freqtable_8hpp.html +++ b/freqtable_8hpp.html @@ -122,7 +122,7 @@ diff --git a/freqtable_8hpp_source.html b/freqtable_8hpp_source.html index 6e3efeed3..0affd4fa7 100644 --- a/freqtable_8hpp_source.html +++ b/freqtable_8hpp_source.html @@ -356,7 +356,7 @@ diff --git a/functions.html b/functions.html index a4809c6ed..83e258abf 100644 --- a/functions.html +++ b/functions.html @@ -159,7 +159,7 @@

- a -

    diff --git a/functions_b.html b/functions_b.html index 4320b4ae3..ef38cffcb 100644 --- a/functions_b.html +++ b/functions_b.html @@ -192,7 +192,7 @@

    - b -

      diff --git a/functions_c.html b/functions_c.html index 3948ff909..c55d1dbc6 100644 --- a/functions_c.html +++ b/functions_c.html @@ -203,7 +203,7 @@

      - c -

        diff --git a/functions_d.html b/functions_d.html index 519609864..fcfd78a2b 100644 --- a/functions_d.html +++ b/functions_d.html @@ -166,7 +166,7 @@

        - d -

          diff --git a/functions_e.html b/functions_e.html index a3cf58e12..9ee4c7da1 100644 --- a/functions_e.html +++ b/functions_e.html @@ -137,7 +137,7 @@

          - e -

            diff --git a/functions_f.html b/functions_f.html index eb3fc8003..d3418b040 100644 --- a/functions_f.html +++ b/functions_f.html @@ -113,7 +113,7 @@

            - f -

              diff --git a/functions_func.html b/functions_func.html index c74518101..2aafbb78f 100644 --- a/functions_func.html +++ b/functions_func.html @@ -140,7 +140,7 @@

              - a -

                diff --git a/functions_func_b.html b/functions_func_b.html index 8097ffff9..69f073a70 100644 --- a/functions_func_b.html +++ b/functions_func_b.html @@ -151,7 +151,7 @@

                - b -

                  diff --git a/functions_func_c.html b/functions_func_c.html index dee5dedb9..9922b6b99 100644 --- a/functions_func_c.html +++ b/functions_func_c.html @@ -155,7 +155,7 @@

                  - c -

                    diff --git a/functions_func_d.html b/functions_func_d.html index 89cb46e58..de03a433d 100644 --- a/functions_func_d.html +++ b/functions_func_d.html @@ -129,7 +129,7 @@

                    - d -

                      diff --git a/functions_func_e.html b/functions_func_e.html index e5df48393..5bae10e89 100644 --- a/functions_func_e.html +++ b/functions_func_e.html @@ -122,7 +122,7 @@

                      - e -

                        diff --git a/functions_func_f.html b/functions_func_f.html index f9d1f618d..d240489e6 100644 --- a/functions_func_f.html +++ b/functions_func_f.html @@ -110,7 +110,7 @@

                        - f -

                          diff --git a/functions_func_g.html b/functions_func_g.html index 4e886d748..c71b4a314 100644 --- a/functions_func_g.html +++ b/functions_func_g.html @@ -224,7 +224,7 @@

                          - g -

                            , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
                          • get_row_vec() -: BArray< Cell_Type, Data_Type > +: BArray< Cell_Type, Data_Type > , BArrayDense< Cell_Type, Data_Type >
                          • get_rules() @@ -245,6 +245,12 @@

                            - g -

                              : Flock , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > +
                            • get_stats_support_sizes() +: Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > +
                              • +
                            • get_stats_support_sizes_acc() +: Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > +
                            • get_stats_target() : Flock , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > @@ -272,7 +278,7 @@

                              - g -

                                diff --git a/functions_func_i.html b/functions_func_i.html index 236e47f1b..403f8afc8 100644 --- a/functions_func_i.html +++ b/functions_func_i.html @@ -151,7 +151,7 @@

                                - i -

                                  diff --git a/functions_func_l.html b/functions_func_l.html index 49950cf84..6005488c3 100644 --- a/functions_func_l.html +++ b/functions_func_l.html @@ -117,7 +117,7 @@

                                  - l -

                                    diff --git a/functions_func_m.html b/functions_func_m.html index 193a7ad4e..2eb333fb0 100644 --- a/functions_func_m.html +++ b/functions_func_m.html @@ -110,7 +110,7 @@

                                    - m -

                                      diff --git a/functions_func_n.html b/functions_func_n.html index 42c975426..e2183b447 100644 --- a/functions_func_n.html +++ b/functions_func_n.html @@ -166,7 +166,7 @@

                                      - n -

                                        diff --git a/functions_func_o.html b/functions_func_o.html index 842ac6e86..d607cf0db 100644 --- a/functions_func_o.html +++ b/functions_func_o.html @@ -228,7 +228,7 @@

                                        - o -

                                          diff --git a/functions_func_p.html b/functions_func_p.html index d2c9ecc71..9529afb42 100644 --- a/functions_func_p.html +++ b/functions_func_p.html @@ -158,7 +158,7 @@

                                          - p -

                                            diff --git a/functions_func_r.html b/functions_func_r.html index fb072b72f..029dbb4ee 100644 --- a/functions_func_r.html +++ b/functions_func_r.html @@ -136,7 +136,7 @@

                                            - r -

                                              diff --git a/functions_func_s.html b/functions_func_s.html index 65a54f8f1..f2c0b5106 100644 --- a/functions_func_s.html +++ b/functions_func_s.html @@ -189,7 +189,7 @@

                                              - s -

                                                diff --git a/functions_func_t.html b/functions_func_t.html index f8f0435f0..bc15e3591 100644 --- a/functions_func_t.html +++ b/functions_func_t.html @@ -116,7 +116,7 @@

                                                - t -

                                                  diff --git a/functions_func_u.html b/functions_func_u.html index a9f244c28..95ba23d8b 100644 --- a/functions_func_u.html +++ b/functions_func_u.html @@ -107,7 +107,7 @@

                                                  - u -

                                                    diff --git a/functions_func_z.html b/functions_func_z.html index a36c1e6d1..c0266639d 100644 --- a/functions_func_z.html +++ b/functions_func_z.html @@ -109,7 +109,7 @@

                                                    - z -

                                                      diff --git a/functions_func_~.html b/functions_func_~.html index 0db8755a3..51d126cd2 100644 --- a/functions_func_~.html +++ b/functions_func_~.html @@ -194,7 +194,7 @@

                                                      - ~ -

                                                        diff --git a/functions_g.html b/functions_g.html index 367e12565..b21de0cdd 100644 --- a/functions_g.html +++ b/functions_g.html @@ -224,7 +224,7 @@

                                                        - g -

                                                          , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
                                                        • get_row_vec() -: BArray< Cell_Type, Data_Type > +: BArray< Cell_Type, Data_Type > , BArrayDense< Cell_Type, Data_Type >
                                                        • get_rules() @@ -245,6 +245,12 @@

                                                          - g -

                                                            : Flock , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > +
                                                          • get_stats_support_sizes() +: Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > +
                                                            • +
                                                          • get_stats_support_sizes_acc() +: Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > +
                                                          • get_stats_target() : Flock , Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > @@ -272,7 +278,7 @@

                                                            - g -

                                                              diff --git a/functions_h.html b/functions_h.html index 2aed74081..9a1f88c8d 100644 --- a/functions_h.html +++ b/functions_h.html @@ -110,7 +110,7 @@

                                                              - h -

                                                                diff --git a/functions_i.html b/functions_i.html index 0ae3cb175..c055b8820 100644 --- a/functions_i.html +++ b/functions_i.html @@ -171,7 +171,7 @@

                                                                - i -

                                                                  diff --git a/functions_k.html b/functions_k.html index 90beacf02..e52b103e7 100644 --- a/functions_k.html +++ b/functions_k.html @@ -104,7 +104,7 @@

                                                                  - k -

                                                                    diff --git a/functions_l.html b/functions_l.html index b4b81bf6c..554cbc0f2 100644 --- a/functions_l.html +++ b/functions_l.html @@ -124,7 +124,7 @@

                                                                    - l -

                                                                      diff --git a/functions_m.html b/functions_m.html index 4781c3550..0a751f22a 100644 --- a/functions_m.html +++ b/functions_m.html @@ -123,7 +123,7 @@

                                                                      - m -

                                                                        diff --git a/functions_n.html b/functions_n.html index 901bc0ff5..21dea95da 100644 --- a/functions_n.html +++ b/functions_n.html @@ -200,7 +200,7 @@

                                                                        - n -

                                                                          diff --git a/functions_o.html b/functions_o.html index 4d637673e..245cb2fa6 100644 --- a/functions_o.html +++ b/functions_o.html @@ -237,7 +237,7 @@

                                                                          - o -

                                                                            diff --git a/functions_p.html b/functions_p.html index 5f35028d5..b5053e666 100644 --- a/functions_p.html +++ b/functions_p.html @@ -182,7 +182,7 @@

                                                                            - p -

                                                                              diff --git a/functions_r.html b/functions_r.html index 60b71ea9d..f0f7fa736 100644 --- a/functions_r.html +++ b/functions_r.html @@ -153,7 +153,7 @@

                                                                              - r -

                                                                                diff --git a/functions_rela.html b/functions_rela.html index 81209e0cb..17dd984aa 100644 --- a/functions_rela.html +++ b/functions_rela.html @@ -137,7 +137,7 @@ diff --git a/functions_s.html b/functions_s.html index bb86b4916..9083cfe9d 100644 --- a/functions_s.html +++ b/functions_s.html @@ -219,7 +219,7 @@

                                                                                - s -

                                                                                  diff --git a/functions_t.html b/functions_t.html index 467fc9c97..636547c3b 100644 --- a/functions_t.html +++ b/functions_t.html @@ -125,7 +125,7 @@

                                                                                  - t -

                                                                                    diff --git a/functions_u.html b/functions_u.html index 4016a27e1..2a4b2213a 100644 --- a/functions_u.html +++ b/functions_u.html @@ -110,7 +110,7 @@

                                                                                    - u -

                                                                                      diff --git a/functions_v.html b/functions_v.html index 18b747284..128dc11c1 100644 --- a/functions_v.html +++ b/functions_v.html @@ -116,7 +116,7 @@

                                                                                      - v -

                                                                                        diff --git a/functions_vars.html b/functions_vars.html index 393d8c183..a990b5c25 100644 --- a/functions_vars.html +++ b/functions_vars.html @@ -512,7 +512,7 @@

                                                                                        - x -

                                                                                          diff --git a/functions_w.html b/functions_w.html index 90e400c87..2bf2b403c 100644 --- a/functions_w.html +++ b/functions_w.html @@ -104,7 +104,7 @@

                                                                                          - w -

                                                                                            diff --git a/functions_x.html b/functions_x.html index 0116beefe..037703341 100644 --- a/functions_x.html +++ b/functions_x.html @@ -107,7 +107,7 @@

                                                                                            - x -

                                                                                              diff --git a/functions_z.html b/functions_z.html index 1ba3dd558..14224895f 100644 --- a/functions_z.html +++ b/functions_z.html @@ -109,7 +109,7 @@

                                                                                              - z -

                                                                                                diff --git a/functions_~.html b/functions_~.html index bbc35cdfa..4082931c9 100644 --- a/functions_~.html +++ b/functions_~.html @@ -194,7 +194,7 @@

                                                                                                - ~ -

                                                                                                  diff --git a/geese-bones_8hpp.html b/geese-bones_8hpp.html index 3f5b00f04..2f44739c1 100644 --- a/geese-bones_8hpp.html +++ b/geese-bones_8hpp.html @@ -291,7 +291,7 @@

                                                                                                  • include
                                                                                                  • barry
                                                                                                  • models
                                                                                                  • geese
                                                                                                  • geese-bones.hpp
                                                                                                    • -
                                                                                                  • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                    • +
                                                                                                  • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
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                                                                                                  • include
                                                                                                  • barry
                                                                                                  • models
                                                                                                  • geese
                                                                                                  • geese-types.hpp
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\mbox{\hyperlink{class_model_a689e68b499eb7bfd92a7f8318f51c121}{get\+\_\+stats\+\_\+support}} () -\item +\begin{DoxyCompactList}\small\item\em Sufficient statistics of the support(s) \end{DoxyCompactList}\item +std\+::vector$<$ size\+\_\+t $>$ $\ast$ \mbox{\hyperlink{class_model_ad58c3af0e2785e39b43966d00b284ece}{get\+\_\+stats\+\_\+support\+\_\+sizes}} () +\begin{DoxyCompactList}\small\item\em Number of vectors included in the support. \end{DoxyCompactList}\item +std\+::vector$<$ size\+\_\+t $>$ $\ast$ \mbox{\hyperlink{class_model_a0cc4d7632840ecdaeaf344b7839cec71}{get\+\_\+stats\+\_\+support\+\_\+sizes\+\_\+acc}} () +\begin{DoxyCompactList}\small\item\em Accumulated number of vectors included in the support. \end{DoxyCompactList}\item std\+::vector$<$ size\+\_\+t $>$ $\ast$ \mbox{\hyperlink{class_model_ab705e7531998b61c1358c6cbef773e0d}{get\+\_\+arrays2support}} () \item std\+::vector$<$ std\+::vector$<$ Array\+\_\+\+Type $>$ $>$ $\ast$ \mbox{\hyperlink{class_model_a567fbbecd8a77f62ada9535f1e56588f}{get\+\_\+pset\+\_\+arrays}} () @@ -502,7 +506,7 @@ \subsubsection*{template$<$typename Array\+\_\+\+Type = BArray$<$$>$, typename D -Definition at line 1558 of file model-\/meat.\+hpp. +Definition at line 1574 of file model-\/meat.\+hpp. \mbox{\Hypertarget{class_model_a2345f3e51002d81bd60cb0b14f006dbd}\label{class_model_a2345f3e51002d81bd60cb0b14f006dbd}} \index{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_counters@{get\_counters}} @@ -546,7 +550,7 @@ \subsubsection*{template$<$typename Array\+\_\+\+Type = BArray$<$$>$, typename D -Definition at line 1565 of file model-\/meat.\+hpp. +Definition at line 1581 of file model-\/meat.\+hpp. \mbox{\Hypertarget{class_model_a248d9516ebc938e2ab5df4f4f9d78121}\label{class_model_a248d9516ebc938e2ab5df4f4f9d78121}} \index{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_pset\_probs@{get\_pset\_probs}} @@ -557,7 +561,7 @@ \subsubsection*{template$<$typename Array\+\_\+\+Type = BArray$<$$>$, typename D -Definition at line 1577 of file model-\/meat.\+hpp. +Definition at line 1593 of file model-\/meat.\+hpp. \mbox{\Hypertarget{class_model_a453d05dbfcef337c385afc7f2000d56b}\label{class_model_a453d05dbfcef337c385afc7f2000d56b}} \index{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_pset\_stats@{get\_pset\_stats}} @@ -572,7 +576,7 @@ \subsubsection*{template$<$typename Array\+\_\+\+Type = BArray$<$$>$, typename D -Definition at line 1571 of file model-\/meat.\+hpp. +Definition at line 1587 of file model-\/meat.\+hpp. \mbox{\Hypertarget{class_model_ab19a8398b4f3fb8a21f8ed89aec2fbf7}\label{class_model_ab19a8398b4f3fb8a21f8ed89aec2fbf7}} \index{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_pset\_stats@{get\_pset\_stats}} @@ -627,8 +631,42 @@ \subsubsection*{template$<$typename Array\+\_\+\+Type = BArray$<$$>$, typename D +Sufficient statistics of the support(s) + + + Definition at line 1551 of file model-\/meat.\+hpp. +\mbox{\Hypertarget{class_model_ad58c3af0e2785e39b43966d00b284ece}\label{class_model_ad58c3af0e2785e39b43966d00b284ece}} +\index{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_support\_sizes@{get\_stats\_support\_sizes}} +\index{get\_stats\_support\_sizes@{get\_stats\_support\_sizes}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}} +\doxysubsubsection{\texorpdfstring{get\_stats\_support\_sizes()}{get\_stats\_support\_sizes()}} +{\footnotesize\ttfamily template$<$typename Array\+\_\+\+Type , typename Data\+\_\+\+Counter\+\_\+\+Type , typename Data\+\_\+\+Rule\+\_\+\+Type , typename Data\+\_\+\+Rule\+\_\+\+Dyn\+\_\+\+Type $>$ \\ +std\+::vector$<$ size\+\_\+t $>$ $\ast$ \mbox{\hyperlink{class_model}{Model}}$<$ Array\+\_\+\+Type, Data\+\_\+\+Counter\+\_\+\+Type, Data\+\_\+\+Rule\+\_\+\+Type, Data\+\_\+\+Rule\+\_\+\+Dyn\+\_\+\+Type $>$\+::get\+\_\+stats\+\_\+support\+\_\+sizes\hspace{0.3cm}{\ttfamily [inline]}} + + + +Number of vectors included in the support. + + + +Definition at line 1559 of file model-\/meat.\+hpp. + +\mbox{\Hypertarget{class_model_a0cc4d7632840ecdaeaf344b7839cec71}\label{class_model_a0cc4d7632840ecdaeaf344b7839cec71}} +\index{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_support\_sizes\_acc@{get\_stats\_support\_sizes\_acc}} +\index{get\_stats\_support\_sizes\_acc@{get\_stats\_support\_sizes\_acc}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}} +\doxysubsubsection{\texorpdfstring{get\_stats\_support\_sizes\_acc()}{get\_stats\_support\_sizes\_acc()}} +{\footnotesize\ttfamily template$<$typename Array\+\_\+\+Type , typename Data\+\_\+\+Counter\+\_\+\+Type , typename Data\+\_\+\+Rule\+\_\+\+Type , typename Data\+\_\+\+Rule\+\_\+\+Dyn\+\_\+\+Type $>$ \\ +std\+::vector$<$ size\+\_\+t $>$ $\ast$ \mbox{\hyperlink{class_model}{Model}}$<$ Array\+\_\+\+Type, Data\+\_\+\+Counter\+\_\+\+Type, Data\+\_\+\+Rule\+\_\+\+Type, Data\+\_\+\+Rule\+\_\+\+Dyn\+\_\+\+Type $>$\+::get\+\_\+stats\+\_\+support\+\_\+sizes\+\_\+acc\hspace{0.3cm}{\ttfamily [inline]}} + + + +Accumulated number of vectors included in the support. + + + +Definition at line 1567 of file model-\/meat.\+hpp. + \mbox{\Hypertarget{class_model_a5414f4d58c598c844bf0e7885e06488a}\label{class_model_a5414f4d58c598c844bf0e7885e06488a}} \index{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_target@{get\_stats\_target}} \index{get\_stats\_target@{get\_stats\_target}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}} @@ -883,7 +921,7 @@ \subsubsection*{template$<$typename Array\+\_\+\+Type = BArray$<$$>$, typename D \end{DoxyParams} -Definition at line 1583 of file model-\/meat.\+hpp. +Definition at line 1599 of file 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Documentation}{subsection.8.42.2}{}} +\@writefile{toc}{\contentsline {subsubsection}{\numberline {8.42.2.1}operator()()}{246}{subsubsection.8.42.2.1}\protected@file@percent } \@writefile{toc}{\contentsline {chapter}{\numberline {9}File Documentation}{247}{chapter.9}\protected@file@percent } \@writefile{lof}{\addvspace {10\p@ }} \@writefile{lot}{\addvspace {10\p@ }} diff --git a/latex/refman.idx b/latex/refman.idx index f601767cf..d8516ee8b 100644 --- a/latex/refman.idx +++ b/latex/refman.idx @@ -1175,14 +1175,14 @@ \indexentry{Model@{Model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{179} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!Model@{Model}|hyperpage}{179} \indexentry{Model@{Model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{179} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!Model@{Model}|hyperpage}{179} -\indexentry{Model@{Model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{179} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!Model@{Model}|hyperpage}{180} +\indexentry{Model@{Model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{180} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!````~Model@{$\sim$Model}|hyperpage}{180} \indexentry{````~Model@{$\sim$Model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{180} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_array@{add\_array}|hyperpage}{180} \indexentry{add\_array@{add\_array}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{180} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_counter@{add\_counter}|hyperpage}{180} -\indexentry{add\_counter@{add\_counter}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{180} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_counter@{add\_counter}|hyperpage}{181} +\indexentry{add\_counter@{add\_counter}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{181} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_counter@{add\_counter}|hyperpage}{181} \indexentry{add\_counter@{add\_counter}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{181} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_hasher@{add\_hasher}|hyperpage}{181} @@ -1191,8 +1191,8 @@ \indexentry{add\_rule@{add\_rule}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{181} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_rule@{add\_rule}|hyperpage}{181} \indexentry{add\_rule@{add\_rule}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{181} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_rule\_dyn@{add\_rule\_dyn}|hyperpage}{181} -\indexentry{add\_rule\_dyn@{add\_rule\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{181} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_rule\_dyn@{add\_rule\_dyn}|hyperpage}{182} +\indexentry{add\_rule\_dyn@{add\_rule\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{182} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_rule\_dyn@{add\_rule\_dyn}|hyperpage}{182} \indexentry{add\_rule\_dyn@{add\_rule\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{182} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!colnames@{colnames}|hyperpage}{182} @@ -1225,449 +1225,453 @@ \indexentry{get\_rules\_dyn@{get\_rules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{185} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_support@{get\_stats\_support}|hyperpage}{185} \indexentry{get\_stats\_support@{get\_stats\_support}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{185} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_target@{get\_stats\_target}|hyperpage}{185} -\indexentry{get\_stats\_target@{get\_stats\_target}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{185} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_support\_sizes@{get\_stats\_support\_sizes}|hyperpage}{185} +\indexentry{get\_stats\_support\_sizes@{get\_stats\_support\_sizes}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{185} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_support\_sizes\_acc@{get\_stats\_support\_sizes\_acc}|hyperpage}{186} +\indexentry{get\_stats\_support\_sizes\_acc@{get\_stats\_support\_sizes\_acc}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{186} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_stats\_target@{get\_stats\_target}|hyperpage}{186} +\indexentry{get\_stats\_target@{get\_stats\_target}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{186} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_support\_fun@{get\_support\_fun}|hyperpage}{186} \indexentry{get\_support\_fun@{get\_support\_fun}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{186} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood@{likelihood}|hyperpage}{186} \indexentry{likelihood@{likelihood}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{186} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood@{likelihood}|hyperpage}{186} -\indexentry{likelihood@{likelihood}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{186} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood@{likelihood}|hyperpage}{186} -\indexentry{likelihood@{likelihood}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{186} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood@{likelihood}|hyperpage}{187} \indexentry{likelihood@{likelihood}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{187} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood\_total@{likelihood\_total}|hyperpage}{187} -\indexentry{likelihood\_total@{likelihood\_total}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{187} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!nrules@{nrules}|hyperpage}{187} -\indexentry{nrules@{nrules}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{187} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!nrules\_dyn@{nrules\_dyn}|hyperpage}{187} -\indexentry{nrules\_dyn@{nrules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{187} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood@{likelihood}|hyperpage}{187} +\indexentry{likelihood@{likelihood}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{187} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood@{likelihood}|hyperpage}{187} +\indexentry{likelihood@{likelihood}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{187} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!likelihood\_total@{likelihood\_total}|hyperpage}{188} +\indexentry{likelihood\_total@{likelihood\_total}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{188} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!nrules@{nrules}|hyperpage}{188} +\indexentry{nrules@{nrules}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{188} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!nrules\_dyn@{nrules\_dyn}|hyperpage}{188} +\indexentry{nrules\_dyn@{nrules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{188} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!nterms@{nterms}|hyperpage}{188} \indexentry{nterms@{nterms}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{188} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!operator=@{operator=}|hyperpage}{188} -\indexentry{operator=@{operator=}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{188} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!print@{print}|hyperpage}{188} -\indexentry{print@{print}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{188} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!print\_stats@{print\_stats}|hyperpage}{188} -\indexentry{print\_stats@{print\_stats}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{188} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!sample@{sample}|hyperpage}{189} -\indexentry{sample@{sample}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{189} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!operator=@{operator=}|hyperpage}{189} +\indexentry{operator=@{operator=}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{189} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!print@{print}|hyperpage}{189} +\indexentry{print@{print}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{189} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!print\_stats@{print\_stats}|hyperpage}{189} +\indexentry{print\_stats@{print\_stats}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{189} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!sample@{sample}|hyperpage}{189} \indexentry{sample@{sample}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{189} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_counters@{set\_counters}|hyperpage}{189} -\indexentry{set\_counters@{set\_counters}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{189} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_rengine@{set\_rengine}|hyperpage}{189} -\indexentry{set\_rengine@{set\_rengine}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{189} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!sample@{sample}|hyperpage}{190} +\indexentry{sample@{sample}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{190} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_counters@{set\_counters}|hyperpage}{190} +\indexentry{set\_counters@{set\_counters}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{190} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_rengine@{set\_rengine}|hyperpage}{190} +\indexentry{set\_rengine@{set\_rengine}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{190} \indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_rules@{set\_rules}|hyperpage}{190} \indexentry{set\_rules@{set\_rules}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{190} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_rules\_dyn@{set\_rules\_dyn}|hyperpage}{190} -\indexentry{set\_rules\_dyn@{set\_rules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{190} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_seed@{set\_seed}|hyperpage}{190} -\indexentry{set\_seed@{set\_seed}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{190} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_transform\_model@{set\_transform\_model}|hyperpage}{190} -\indexentry{set\_transform\_model@{set\_transform\_model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{190} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!size@{size}|hyperpage}{191} -\indexentry{size@{size}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!size\_unique@{size\_unique}|hyperpage}{191} -\indexentry{size\_unique@{size\_unique}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!store\_psets@{store\_psets}|hyperpage}{191} -\indexentry{store\_psets@{store\_psets}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!support\_size@{support\_size}|hyperpage}{191} -\indexentry{support\_size@{support\_size}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!transform\_model@{transform\_model}|hyperpage}{191} -\indexentry{transform\_model@{transform\_model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!update\_normalizing\_constants@{update\_normalizing\_constants}|hyperpage}{192} -\indexentry{update\_normalizing\_constants@{update\_normalizing\_constants}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!arrays2support@{arrays2support}|hyperpage}{192} -\indexentry{arrays2support@{arrays2support}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!counter\_fun@{counter\_fun}|hyperpage}{192} -\indexentry{counter\_fun@{counter\_fun}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!counters@{counters}|hyperpage}{192} -\indexentry{counters@{counters}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_counters@{delete\_counters}|hyperpage}{193} -\indexentry{delete\_counters@{delete\_counters}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rengine@{delete\_rengine}|hyperpage}{193} -\indexentry{delete\_rengine@{delete\_rengine}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rules@{delete\_rules}|hyperpage}{193} -\indexentry{delete\_rules@{delete\_rules}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rules\_dyn@{delete\_rules\_dyn}|hyperpage}{193} -\indexentry{delete\_rules\_dyn@{delete\_rules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!first\_calc\_done@{first\_calc\_done}|hyperpage}{193} -\indexentry{first\_calc\_done@{first\_calc\_done}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!keys2support@{keys2support}|hyperpage}{194} -\indexentry{keys2support@{keys2support}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!normalizing\_constants@{normalizing\_constants}|hyperpage}{194} -\indexentry{normalizing\_constants@{normalizing\_constants}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!params\_last@{params\_last}|hyperpage}{194} -\indexentry{params\_last@{params\_last}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!pset\_arrays@{pset\_arrays}|hyperpage}{194} -\indexentry{pset\_arrays@{pset\_arrays}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!pset\_probs@{pset\_probs}|hyperpage}{195} -\indexentry{pset\_probs@{pset\_probs}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!pset\_stats@{pset\_stats}|hyperpage}{195} -\indexentry{pset\_stats@{pset\_stats}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!rengine@{rengine}|hyperpage}{195} -\indexentry{rengine@{rengine}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!rules@{rules}|hyperpage}{195} -\indexentry{rules@{rules}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!rules\_dyn@{rules\_dyn}|hyperpage}{196} -\indexentry{rules\_dyn@{rules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support@{stats\_support}|hyperpage}{196} -\indexentry{stats\_support@{stats\_support}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support\_n\_arrays@{stats\_support\_n\_arrays}|hyperpage}{196} -\indexentry{stats\_support\_n\_arrays@{stats\_support\_n\_arrays}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support\_sizes@{stats\_support\_sizes}|hyperpage}{196} -\indexentry{stats\_support\_sizes@{stats\_support\_sizes}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support\_sizes\_acc@{stats\_support\_sizes\_acc}|hyperpage}{197} -\indexentry{stats\_support\_sizes\_acc@{stats\_support\_sizes\_acc}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_target@{stats\_target}|hyperpage}{197} -\indexentry{stats\_target@{stats\_target}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!support\_fun@{support\_fun}|hyperpage}{197} -\indexentry{support\_fun@{support\_fun}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!transform\_model\_fun@{transform\_model\_fun}|hyperpage}{197} -\indexentry{transform\_model\_fun@{transform\_model\_fun}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!transform\_model\_term\_names@{transform\_model\_term\_names}|hyperpage}{198} -\indexentry{transform\_model\_term\_names@{transform\_model\_term\_names}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{198} -\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!with\_pset@{with\_pset}|hyperpage}{198} -\indexentry{with\_pset@{with\_pset}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{198} -\indexentry{NetCounterData@{NetCounterData}|hyperpage}{199} -\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{199} -\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{199} -\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{199} -\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{199} -\indexentry{NetCounterData@{NetCounterData}!````~NetCounterData@{$\sim$NetCounterData}|hyperpage}{199} -\indexentry{````~NetCounterData@{$\sim$NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{199} -\indexentry{NetCounterData@{NetCounterData}!indices@{indices}|hyperpage}{200} -\indexentry{indices@{indices}!NetCounterData@{NetCounterData}|hyperpage}{200} -\indexentry{NetCounterData@{NetCounterData}!numbers@{numbers}|hyperpage}{200} -\indexentry{numbers@{numbers}!NetCounterData@{NetCounterData}|hyperpage}{200} -\indexentry{NetworkData@{NetworkData}|hyperpage}{200} -\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{201} -\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{201} -\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{201} -\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{201} -\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{201} -\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{201} -\indexentry{NetworkData@{NetworkData}!````~NetworkData@{$\sim$NetworkData}|hyperpage}{202} -\indexentry{````~NetworkData@{$\sim$NetworkData}!NetworkData@{NetworkData}|hyperpage}{202} -\indexentry{NetworkData@{NetworkData}!directed@{directed}|hyperpage}{202} -\indexentry{directed@{directed}!NetworkData@{NetworkData}|hyperpage}{202} -\indexentry{NetworkData@{NetworkData}!vertex\_attr@{vertex\_attr}|hyperpage}{202} -\indexentry{vertex\_attr@{vertex\_attr}!NetworkData@{NetworkData}|hyperpage}{202} -\indexentry{Node@{Node}|hyperpage}{202} -\indexentry{Node@{Node}!Node@{Node}|hyperpage}{203} -\indexentry{Node@{Node}!Node@{Node}|hyperpage}{203} -\indexentry{Node@{Node}!Node@{Node}|hyperpage}{204} -\indexentry{Node@{Node}!Node@{Node}|hyperpage}{204} -\indexentry{Node@{Node}!Node@{Node}|hyperpage}{204} -\indexentry{Node@{Node}!Node@{Node}|hyperpage}{204} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_rules\_dyn@{set\_rules\_dyn}|hyperpage}{191} +\indexentry{set\_rules\_dyn@{set\_rules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_seed@{set\_seed}|hyperpage}{191} +\indexentry{set\_seed@{set\_seed}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_transform\_model@{set\_transform\_model}|hyperpage}{191} +\indexentry{set\_transform\_model@{set\_transform\_model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{191} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!size@{size}|hyperpage}{192} +\indexentry{size@{size}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!size\_unique@{size\_unique}|hyperpage}{192} +\indexentry{size\_unique@{size\_unique}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!store\_psets@{store\_psets}|hyperpage}{192} +\indexentry{store\_psets@{store\_psets}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!support\_size@{support\_size}|hyperpage}{192} +\indexentry{support\_size@{support\_size}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!transform\_model@{transform\_model}|hyperpage}{192} +\indexentry{transform\_model@{transform\_model}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{192} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!update\_normalizing\_constants@{update\_normalizing\_constants}|hyperpage}{193} +\indexentry{update\_normalizing\_constants@{update\_normalizing\_constants}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!arrays2support@{arrays2support}|hyperpage}{193} +\indexentry{arrays2support@{arrays2support}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!counter\_fun@{counter\_fun}|hyperpage}{193} +\indexentry{counter\_fun@{counter\_fun}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!counters@{counters}|hyperpage}{193} +\indexentry{counters@{counters}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{193} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_counters@{delete\_counters}|hyperpage}{194} +\indexentry{delete\_counters@{delete\_counters}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rengine@{delete\_rengine}|hyperpage}{194} +\indexentry{delete\_rengine@{delete\_rengine}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rules@{delete\_rules}|hyperpage}{194} +\indexentry{delete\_rules@{delete\_rules}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rules\_dyn@{delete\_rules\_dyn}|hyperpage}{194} +\indexentry{delete\_rules\_dyn@{delete\_rules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!first\_calc\_done@{first\_calc\_done}|hyperpage}{194} +\indexentry{first\_calc\_done@{first\_calc\_done}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{194} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!keys2support@{keys2support}|hyperpage}{195} +\indexentry{keys2support@{keys2support}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!normalizing\_constants@{normalizing\_constants}|hyperpage}{195} +\indexentry{normalizing\_constants@{normalizing\_constants}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!params\_last@{params\_last}|hyperpage}{195} +\indexentry{params\_last@{params\_last}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!pset\_arrays@{pset\_arrays}|hyperpage}{195} +\indexentry{pset\_arrays@{pset\_arrays}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{195} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!pset\_probs@{pset\_probs}|hyperpage}{196} +\indexentry{pset\_probs@{pset\_probs}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!pset\_stats@{pset\_stats}|hyperpage}{196} +\indexentry{pset\_stats@{pset\_stats}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!rengine@{rengine}|hyperpage}{196} +\indexentry{rengine@{rengine}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!rules@{rules}|hyperpage}{196} +\indexentry{rules@{rules}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{196} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!rules\_dyn@{rules\_dyn}|hyperpage}{197} +\indexentry{rules\_dyn@{rules\_dyn}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support@{stats\_support}|hyperpage}{197} +\indexentry{stats\_support@{stats\_support}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support\_n\_arrays@{stats\_support\_n\_arrays}|hyperpage}{197} +\indexentry{stats\_support\_n\_arrays@{stats\_support\_n\_arrays}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support\_sizes@{stats\_support\_sizes}|hyperpage}{197} +\indexentry{stats\_support\_sizes@{stats\_support\_sizes}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{197} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_support\_sizes\_acc@{stats\_support\_sizes\_acc}|hyperpage}{198} +\indexentry{stats\_support\_sizes\_acc@{stats\_support\_sizes\_acc}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{198} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!stats\_target@{stats\_target}|hyperpage}{198} +\indexentry{stats\_target@{stats\_target}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{198} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!support\_fun@{support\_fun}|hyperpage}{198} +\indexentry{support\_fun@{support\_fun}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{198} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!transform\_model\_fun@{transform\_model\_fun}|hyperpage}{198} +\indexentry{transform\_model\_fun@{transform\_model\_fun}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{198} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!transform\_model\_term\_names@{transform\_model\_term\_names}|hyperpage}{199} +\indexentry{transform\_model\_term\_names@{transform\_model\_term\_names}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{199} +\indexentry{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!with\_pset@{with\_pset}|hyperpage}{199} +\indexentry{with\_pset@{with\_pset}!Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{199} +\indexentry{NetCounterData@{NetCounterData}|hyperpage}{200} +\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{200} +\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{200} +\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{200} +\indexentry{NetCounterData@{NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{200} +\indexentry{NetCounterData@{NetCounterData}!````~NetCounterData@{$\sim$NetCounterData}|hyperpage}{200} +\indexentry{````~NetCounterData@{$\sim$NetCounterData}!NetCounterData@{NetCounterData}|hyperpage}{200} +\indexentry{NetCounterData@{NetCounterData}!indices@{indices}|hyperpage}{201} +\indexentry{indices@{indices}!NetCounterData@{NetCounterData}|hyperpage}{201} +\indexentry{NetCounterData@{NetCounterData}!numbers@{numbers}|hyperpage}{201} +\indexentry{numbers@{numbers}!NetCounterData@{NetCounterData}|hyperpage}{201} +\indexentry{NetworkData@{NetworkData}|hyperpage}{201} +\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{202} +\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{202} +\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{202} +\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{202} +\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{202} +\indexentry{NetworkData@{NetworkData}!NetworkData@{NetworkData}|hyperpage}{202} +\indexentry{NetworkData@{NetworkData}!````~NetworkData@{$\sim$NetworkData}|hyperpage}{203} +\indexentry{````~NetworkData@{$\sim$NetworkData}!NetworkData@{NetworkData}|hyperpage}{203} +\indexentry{NetworkData@{NetworkData}!directed@{directed}|hyperpage}{203} +\indexentry{directed@{directed}!NetworkData@{NetworkData}|hyperpage}{203} 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-\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rules@{delete\_rules}|hyperpage}{243} -\indexentry{delete\_rules@{delete\_rules}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} -\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_rules\_dyn@{delete\_rules\_dyn}|hyperpage}{243} -\indexentry{delete\_rules\_dyn@{delete\_rules\_dyn}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} -\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!hashes@{hashes}|hyperpage}{243} -\indexentry{hashes@{hashes}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} -\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!hashes\_initialized@{hashes\_initialized}|hyperpage}{243} -\indexentry{hashes\_initialized@{hashes\_initialized}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} -\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!M@{M}|hyperpage}{243} -\indexentry{M@{M}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} -\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!max\_num\_elements@{max\_num\_elements}|hyperpage}{244} -\indexentry{max\_num\_elements@{max\_num\_elements}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{244} -\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!N@{N}|hyperpage}{244} -\indexentry{N@{N}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{244} -\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!n\_counters@{n\_counters}|hyperpage}{244} -\indexentry{n\_counters@{n\_counters}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{244} -\indexentry{vecHasher$<$ T $>$@{vecHasher$<$ T $>$}|hyperpage}{244} -\indexentry{vecHasher$<$ T $>$@{vecHasher$<$ T $>$}!operator()@{operator()}|hyperpage}{245} -\indexentry{operator()@{operator()}!vecHasher$<$ T $>$@{vecHasher$<$ T $>$}|hyperpage}{245} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_rule@{add\_rule}|hyperpage}{238} +\indexentry{add\_rule@{add\_rule}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{238} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_rule\_dyn@{add\_rule\_dyn}|hyperpage}{238} +\indexentry{add\_rule\_dyn@{add\_rule\_dyn}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{238} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!add\_rule\_dyn@{add\_rule\_dyn}|hyperpage}{238} +\indexentry{add\_rule\_dyn@{add\_rule\_dyn}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{238} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!calc@{calc}|hyperpage}{238} +\indexentry{calc@{calc}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{238} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!eval\_rules\_dyn@{eval\_rules\_dyn}|hyperpage}{239} +\indexentry{eval\_rules\_dyn@{eval\_rules\_dyn}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{239} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_counters@{get\_counters}|hyperpage}{239} +\indexentry{get\_counters@{get\_counters}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{239} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_counts@{get\_counts}|hyperpage}{239} +\indexentry{get\_counts@{get\_counts}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{239} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_current\_stats@{get\_current\_stats}|hyperpage}{239} +\indexentry{get\_current\_stats@{get\_current\_stats}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{239} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_data@{get\_data}|hyperpage}{240} +\indexentry{get\_data@{get\_data}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{240} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!get\_rules@{get\_rules}|hyperpage}{240} +\indexentry{get\_rules@{get\_rules}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{240} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type 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+\indexentry{print@{print}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{241} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!reset\_array@{reset\_array}|hyperpage}{241} +\indexentry{reset\_array@{reset\_array}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{241} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!reset\_array@{reset\_array}|hyperpage}{241} +\indexentry{reset\_array@{reset\_array}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{241} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_counters@{set\_counters}|hyperpage}{241} +\indexentry{set\_counters@{set\_counters}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{241} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_rules@{set\_rules}|hyperpage}{242} +\indexentry{set\_rules@{set\_rules}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{242} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!set\_rules\_dyn@{set\_rules\_dyn}|hyperpage}{242} +\indexentry{set\_rules\_dyn@{set\_rules\_dyn}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{242} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!change\_stats@{change\_stats}|hyperpage}{242} +\indexentry{change\_stats@{change\_stats}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{242} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!coordiantes\_n\_free@{coordiantes\_n\_free}|hyperpage}{242} +\indexentry{coordiantes\_n\_free@{coordiantes\_n\_free}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{242} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!coordiantes\_n\_locked@{coordiantes\_n\_locked}|hyperpage}{243} +\indexentry{coordiantes\_n\_locked@{coordiantes\_n\_locked}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!coordinates\_free@{coordinates\_free}|hyperpage}{243} +\indexentry{coordinates\_free@{coordinates\_free}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!coordinates\_locked@{coordinates\_locked}|hyperpage}{243} +\indexentry{coordinates\_locked@{coordinates\_locked}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!current\_stats@{current\_stats}|hyperpage}{243} +\indexentry{current\_stats@{current\_stats}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{243} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!delete\_counters@{delete\_counters}|hyperpage}{243} +\indexentry{delete\_counters@{delete\_counters}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type 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Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{244} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!hashes@{hashes}|hyperpage}{244} +\indexentry{hashes@{hashes}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{244} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!hashes\_initialized@{hashes\_initialized}|hyperpage}{244} +\indexentry{hashes\_initialized@{hashes\_initialized}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{244} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!M@{M}|hyperpage}{244} +\indexentry{M@{M}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{244} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!max\_num\_elements@{max\_num\_elements}|hyperpage}{245} +\indexentry{max\_num\_elements@{max\_num\_elements}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{245} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!N@{N}|hyperpage}{245} +\indexentry{N@{N}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{245} +\indexentry{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}!n\_counters@{n\_counters}|hyperpage}{245} +\indexentry{n\_counters@{n\_counters}!Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$@{Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}|hyperpage}{245} +\indexentry{vecHasher$<$ T $>$@{vecHasher$<$ T $>$}|hyperpage}{245} +\indexentry{vecHasher$<$ T $>$@{vecHasher$<$ T $>$}!operator()@{operator()}|hyperpage}{246} +\indexentry{operator()@{operator()}!vecHasher$<$ T $>$@{vecHasher$<$ T $>$}|hyperpage}{246} \indexentry{include/barry/barray-\/bones.hpp@{include/barry/barray-\/bones.hpp}|hyperpage}{247} \indexentry{include/barry/barray-\/iterator.hpp@{include/barry/barray-\/iterator.hpp}|hyperpage}{247} \indexentry{include/barry/barray-\/meat-\/operators.hpp@{include/barry/barray-\/meat-\/operators.hpp}|hyperpage}{248} diff --git a/latex/refman.ilg b/latex/refman.ilg index a5c774f4f..576f1b415 100644 --- a/latex/refman.ilg +++ b/latex/refman.ilg @@ -1,6 +1,6 @@ This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). -Scanning input file refman.idx......done (2225 entries accepted, 0 rejected). -Sorting entries.....................done (26505 comparisons). -Generating output file refman.ind.....done (2877 lines written, 0 warnings). +Scanning input file refman.idx......done (2229 entries accepted, 0 rejected). +Sorting entries.....................done (26289 comparisons). +Generating output file refman.ind.....done (2885 lines written, 0 warnings). Output written in refman.ind. Transcript written in refman.ilg. diff --git a/latex/refman.ind b/latex/refman.ind index 0cc1e3e68..460060d67 100644 --- a/latex/refman.ind +++ b/latex/refman.ind @@ -51,28 +51,28 @@ \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{180} \item {$\sim$NetCounterData} - \subitem {NetCounterData}, \hyperpage{199} + \subitem {NetCounterData}, \hyperpage{200} \item {$\sim$NetworkData} - \subitem {NetworkData}, \hyperpage{202} + \subitem {NetworkData}, \hyperpage{203} \item {$\sim$Node} - \subitem {Node}, \hyperpage{204} + \subitem {Node}, \hyperpage{205} \item {$\sim$PhyloRuleDynData} - \subitem {PhyloRuleDynData}, \hyperpage{213} + \subitem {PhyloRuleDynData}, \hyperpage{214} \item {$\sim$PowerSet} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{216} + \hyperpage{217} \item {$\sim$Progress} - \subitem {Progress}, \hyperpage{221} + \subitem {Progress}, \hyperpage{222} \item {$\sim$Rule} - \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{223} + \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{224} \item {$\sim$Rules} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{226} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{227} \item {$\sim$StatsCounter} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{231} + \hyperpage{232} \item {$\sim$Support} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{236} + \hyperpage{237} \indexspace @@ -88,11 +88,11 @@ \subitem {Counters$<$ Array\_Type, Data\_Type $>$}, \hyperpage{135, 136} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{180, 181} + \hyperpage{181} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{231} + \hyperpage{232} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{236} + \hyperpage{237} \item {add\_data} \subitem {Flock}, \hyperpage{151} \item {add\_dims} @@ -106,28 +106,28 @@ \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{181} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{216, 217} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{227} + \hyperpage{217, 218} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{228} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{236, 237} + \hyperpage{237, 238} \item {add\_rule\_dyn} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{181, 182} + \hyperpage{182} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{237} + \hyperpage{238} \item {annotations} - \subitem {Node}, \hyperpage{205} + \subitem {Node}, \hyperpage{206} \item {Array} \subitem {ConstBArrayRowIter$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{127} \item {array} - \subitem {Node}, \hyperpage{205} + \subitem {Node}, \hyperpage{206} \subitem {Phylo rules}, \hyperpage{44} \item {arrays} - \subitem {Node}, \hyperpage{206} + \subitem {Node}, \hyperpage{207} \item {arrays2support} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{192} + \hyperpage{193} \item {AS\_ONE} \subitem {EXISTS}, \hyperpage{57} \item {as\_vector} @@ -136,7 +136,7 @@ \subitem {EXISTS}, \hyperpage{57} \item {at} \subitem {Phylo rules}, \hyperpage{39} - \subitem {PhyloCounterData}, \hyperpage{210} + \subitem {PhyloCounterData}, \hyperpage{211} \indexspace @@ -572,12 +572,12 @@ \hyperpage{115} \subitem {BArrayVector\_const$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{119} - \subitem {PhyloCounterData}, \hyperpage{210} + \subitem {PhyloCounterData}, \hyperpage{211} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{217} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{227} + \hyperpage{218} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{228} \item {blengths} - \subitem {NodeData}, \hyperpage{209} + \subitem {NodeData}, \hyperpage{210} \item {BOTH} \subitem {CHECK}, \hyperpage{56} \subitem {EXISTS}, \hyperpage{57} @@ -592,9 +592,9 @@ \item {calc} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{217} + \hyperpage{218} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{237} + \hyperpage{238} \item {calc\_reduced\_sequence} \subitem {Geese}, \hyperpage{164} \item {calc\_sequence} @@ -615,7 +615,7 @@ \item {Cell\_const$<$ Cell\_Type $>$}, \hyperpage{126} \item {change\_stats} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{241} + \hyperpage{242} \item {CHECK}, \hyperpage{56} \subitem {BOTH}, \hyperpage{56} \subitem {NONE}, \hyperpage{56} @@ -662,28 +662,28 @@ \subitem {iter}, \hyperpage{128} \item {coordiantes\_n\_free} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{241} + \hyperpage{242} \item {coordiantes\_n\_locked} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{242} + \hyperpage{243} \item {coordinates\_free} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{219} + \hyperpage{220} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{242} + \hyperpage{243} \item {coordinates\_locked} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{219} + \hyperpage{220} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{242} + \hyperpage{243} \item {count} \subitem {Counter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{131} \item {count\_all} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{231} + \hyperpage{232} \item {count\_current} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{232} + \hyperpage{233} \item {count\_fun} \subitem {Counter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{132} \subitem {counters-\/meat.hpp}, \hyperpage{278} @@ -691,7 +691,7 @@ \subitem {counters-\/meat.hpp}, \hyperpage{283} \item {count\_init} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{232} + \hyperpage{233} \item {Counter} \subitem {Counter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{130} \item {counter} @@ -769,7 +769,7 @@ \subitem {Network counters}, \hyperpage{28} \item {counter\_fun} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{192} + \hyperpage{193} \item {Counter\_fun\_type} \subitem {typedefs.hpp}, \hyperpage{340} \item {COUNTER\_FUNCTION} @@ -888,7 +888,7 @@ \hyperpage{134, 135} \item {counters} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{192} + \hyperpage{193} \subitem {statscounter-\/meat.hpp}, \hyperpage{335} \item {Counters$<$ Array\_Type, Data\_Type $>$}, \hyperpage{134} \subitem {$\sim$Counters}, \hyperpage{135} @@ -990,7 +990,7 @@ \subitem {PHYLO\_RULE\_DYN\_LAMBDA}, \hyperpage{17} \item {counts} \subitem {Phylo rules}, \hyperpage{44} - \subitem {PhyloRuleDynData}, \hyperpage{213} + \subitem {PhyloRuleDynData}, \hyperpage{214} \item {Counts\_type} \subitem {typedefs.hpp}, \hyperpage{340} \item {covar\_sort} @@ -1030,7 +1030,7 @@ \item {current\_stats} \subitem {statscounter-\/meat.hpp}, \hyperpage{335} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{242} + \hyperpage{243} \indexspace @@ -1038,7 +1038,7 @@ \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{64} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{84} - \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{224} + \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{225} \item {D\_ptr} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{64} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -1049,7 +1049,7 @@ \subitem {Counter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{132} \subitem {counters-\/meat.hpp}, \hyperpage{281} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{219} + \hyperpage{220} \item {data\_} \subitem {counters-\/meat.hpp}, \hyperpage{284} \item {default\_val} @@ -1130,23 +1130,23 @@ \subitem {Phylo rules}, \hyperpage{38} \item {delete\_counters} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{193} + \hyperpage{194} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{242} + \hyperpage{243} \item {delete\_rengine} \subitem {Geese}, \hyperpage{172} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{193} + \hyperpage{194} \item {delete\_rules} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{193} + \hyperpage{194} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{243} + \hyperpage{244} \item {delete\_rules\_dyn} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{193} + \hyperpage{194} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{243} + \hyperpage{244} \item {delete\_support} \subitem {Geese}, \hyperpage{172} \item {desc} @@ -1155,19 +1155,19 @@ \item {desc\_} \subitem {counters-\/meat.hpp}, \hyperpage{284} \item {directed} - \subitem {NetworkData}, \hyperpage{202} + \subitem {NetworkData}, \hyperpage{203} \item {duplication} - \subitem {Node}, \hyperpage{206} - \subitem {NodeData}, \hyperpage{209} - \subitem {PhyloRuleDynData}, \hyperpage{213} + \subitem {Node}, \hyperpage{207} + \subitem {NodeData}, \hyperpage{210} + \subitem {PhyloRuleDynData}, \hyperpage{214} \indexspace \item {empty} - \subitem {PhyloCounterData}, \hyperpage{210} + \subitem {PhyloCounterData}, \hyperpage{211} \item {EmptyArray} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{219} + \hyperpage{220} \subitem {statscounter-\/meat.hpp}, \hyperpage{335} \item {end} \subitem {BArrayDenseCol$<$ Cell\_Type, Data\_Type $>$}, @@ -1182,11 +1182,11 @@ \hyperpage{115} \subitem {BArrayVector\_const$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{119} - \subitem {PhyloCounterData}, \hyperpage{211} + \subitem {PhyloCounterData}, \hyperpage{212} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{217} - \subitem {Progress}, \hyperpage{222} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{227} + \hyperpage{218} + \subitem {Progress}, \hyperpage{223} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{228} \item {Entries} \subitem {Entries$<$ Cell\_Type $>$}, \hyperpage{148} \item {Entries$<$ Cell\_Type $>$}, \hyperpage{148} @@ -1206,7 +1206,7 @@ \subitem {Geese}, \hyperpage{173} \item {eval\_rules\_dyn} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{238} + \hyperpage{239} \item {EXISTS}, \hyperpage{57} \subitem {AS\_ONE}, \hyperpage{57} \subitem {AS\_ZERO}, \hyperpage{57} @@ -1222,7 +1222,7 @@ \subitem {statscounter-\/meat.hpp}, \hyperpage{336} \item {first\_calc\_done} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{193} + \hyperpage{194} \item {Flock}, \hyperpage{150} \subitem {$\sim$Flock}, \hyperpage{151} \subitem {add\_data}, \hyperpage{151} @@ -1381,36 +1381,36 @@ \subitem {Geese}, \hyperpage{165} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{183} - \subitem {PhyloCounterData}, \hyperpage{211} + \subitem {PhyloCounterData}, \hyperpage{212} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{232} + \hyperpage{233} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{238} + \hyperpage{239} \item {get\_counts} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{238} + \hyperpage{239} \item {get\_current\_stats} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{238} + \hyperpage{239} \item {get\_data} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{86} \subitem {FreqTable$<$ T $>$}, \hyperpage{159} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{217} + \hyperpage{218} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{239} + \hyperpage{240} \item {get\_data\_ptr} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{218} + \hyperpage{219} \item {get\_description} \subitem {Counter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{131} - \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{224} + \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{225} \item {get\_descriptions} \subitem {Counters$<$ Array\_Type, Data\_Type $>$}, \hyperpage{136} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{227} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{228} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{232} + \hyperpage{233} \item {get\_entries} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{65} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -1439,17 +1439,17 @@ \subitem {DEFM}, \hyperpage{141} \item {get\_name} \subitem {Counter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{131} - \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{224} + \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{225} \item {get\_names} \subitem {Counters$<$ Array\_Type, Data\_Type $>$}, \hyperpage{137} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{228} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{229} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{232} + \hyperpage{233} \item {get\_normalizing\_constants} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{183} \item {get\_parent} - \subitem {Node}, \hyperpage{205} + \subitem {Node}, \hyperpage{206} \item {get\_probabilities} \subitem {Geese}, \hyperpage{166} \item {get\_pset} @@ -1476,24 +1476,30 @@ \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{185} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{239} + \hyperpage{240} \item {get\_rules\_dyn} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{185} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{239} + \hyperpage{240} \item {get\_seq} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{228} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{229} \item {get\_states} \subitem {Geese}, \hyperpage{166} \item {get\_stats\_support} \subitem {Flock}, \hyperpage{152} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{185} + \item {get\_stats\_support\_sizes} + \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, + \hyperpage{185} + \item {get\_stats\_support\_sizes\_acc} + \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, + \hyperpage{186} \item {get\_stats\_target} \subitem {Flock}, \hyperpage{152} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{185} + \hyperpage{186} \item {get\_support\_fun} \subitem {Flock}, \hyperpage{153} \subitem {Geese}, \hyperpage{166} @@ -1521,17 +1527,17 @@ \subitem {typedefs.hpp}, \hyperpage{340} \item {hashes} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{243} + \hyperpage{244} \item {hashes\_initialized} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{243} + \hyperpage{244} \indexspace \item {i} \subitem {counters-\/meat.hpp}, \hyperpage{285} \item {id} - \subitem {Node}, \hyperpage{206} + \subitem {Node}, \hyperpage{207} \item {idx} \subitem {Phylo rules}, \hyperpage{40, 41} \item {if} @@ -1612,7 +1618,7 @@ \item {include/barry/support-\/meat.hpp}, \hyperpage{337} \item {include/barry/typedefs.hpp}, \hyperpage{338} \item {indices} - \subitem {NetCounterData}, \hyperpage{200} + \subitem {NetCounterData}, \hyperpage{201} \subitem {Phylo rules}, \hyperpage{44, 45} \item {inherit\_support} \subitem {Geese}, \hyperpage{167} @@ -1631,9 +1637,9 @@ \subitem {Geese}, \hyperpage{167} \item {init\_support} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{218} + \hyperpage{219} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{239} + \hyperpage{240} \item {INITIALIZED} \subitem {geese-\/bones.hpp}, \hyperpage{317} \item {initialized} @@ -1661,7 +1667,7 @@ \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{88} \item {is\_leaf} - \subitem {Node}, \hyperpage{205} + \subitem {Node}, \hyperpage{206} \item {is\_motif} \subitem {DEFM}, \hyperpage{142} \subitem {Phylo rules}, \hyperpage{45} @@ -1692,12 +1698,12 @@ \subitem {geese-\/bones.hpp}, \hyperpage{317} \item {keys2support} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{194} + \hyperpage{195} \indexspace \item {lb} - \subitem {PhyloRuleDynData}, \hyperpage{214} + \subitem {PhyloRuleDynData}, \hyperpage{215} \item {likelihood} \subitem {Geese}, \hyperpage{167} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, @@ -1710,7 +1716,7 @@ \subitem {Flock}, \hyperpage{153} \item {likelihood\_total} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{187} + \hyperpage{188} \item {logical} \subitem {Phylo rules}, \hyperpage{45} \item {logodds} @@ -1720,9 +1726,9 @@ \item {M} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{219} + \hyperpage{220} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{243} + \hyperpage{244} \item {MAKE\_DEFM\_HASHER} \subitem {Counting}, \hyperpage{16} \item {MAKE\_DUPL\_VARS} @@ -1737,30 +1743,30 @@ \subitem {typedefs.hpp}, \hyperpage{341} \item {max\_num\_elements} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{244} + \hyperpage{245} \item {Model} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{179} + \hyperpage{179, 180} \item {model} \subitem {Flock}, \hyperpage{156} \item {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{175} \subitem {$\sim$Model}, \hyperpage{180} \subitem {add\_array}, \hyperpage{180} - \subitem {add\_counter}, \hyperpage{180, 181} + \subitem {add\_counter}, \hyperpage{181} \subitem {add\_hasher}, \hyperpage{181} \subitem {add\_rule}, \hyperpage{181} - \subitem {add\_rule\_dyn}, \hyperpage{181, 182} - \subitem {arrays2support}, \hyperpage{192} + \subitem {add\_rule\_dyn}, \hyperpage{182} + \subitem {arrays2support}, \hyperpage{193} \subitem {colnames}, \hyperpage{182} \subitem {conditional\_prob}, \hyperpage{182} - \subitem {counter\_fun}, \hyperpage{192} - \subitem {counters}, \hyperpage{192} - \subitem {delete\_counters}, \hyperpage{193} - \subitem {delete\_rengine}, \hyperpage{193} - \subitem {delete\_rules}, \hyperpage{193} - \subitem {delete\_rules\_dyn}, \hyperpage{193} - \subitem {first\_calc\_done}, \hyperpage{193} + \subitem {counter\_fun}, \hyperpage{193} + \subitem {counters}, \hyperpage{193} + \subitem {delete\_counters}, \hyperpage{194} + \subitem {delete\_rengine}, \hyperpage{194} + \subitem {delete\_rules}, \hyperpage{194} + \subitem {delete\_rules\_dyn}, \hyperpage{194} + \subitem {first\_calc\_done}, \hyperpage{194} \subitem {gen\_key}, \hyperpage{183} \subitem {get\_arrays2support}, \hyperpage{183} \subitem {get\_counters}, \hyperpage{183} @@ -1773,48 +1779,50 @@ \subitem {get\_rules}, \hyperpage{185} \subitem {get\_rules\_dyn}, \hyperpage{185} \subitem {get\_stats\_support}, \hyperpage{185} - \subitem {get\_stats\_target}, \hyperpage{185} + \subitem {get\_stats\_support\_sizes}, \hyperpage{185} + \subitem {get\_stats\_support\_sizes\_acc}, \hyperpage{186} + \subitem {get\_stats\_target}, \hyperpage{186} \subitem {get\_support\_fun}, \hyperpage{186} - \subitem {keys2support}, \hyperpage{194} + \subitem {keys2support}, \hyperpage{195} \subitem {likelihood}, \hyperpage{186, 187} - \subitem {likelihood\_total}, \hyperpage{187} - \subitem {Model}, \hyperpage{179} - \subitem {normalizing\_constants}, \hyperpage{194} - \subitem {nrules}, \hyperpage{187} - \subitem {nrules\_dyn}, \hyperpage{187} + \subitem {likelihood\_total}, \hyperpage{188} + \subitem {Model}, \hyperpage{179, 180} + \subitem {normalizing\_constants}, \hyperpage{195} + \subitem {nrules}, \hyperpage{188} + \subitem {nrules\_dyn}, \hyperpage{188} \subitem {nterms}, \hyperpage{188} - \subitem {operator=}, \hyperpage{188} - \subitem {params\_last}, \hyperpage{194} - \subitem {print}, \hyperpage{188} - \subitem {print\_stats}, \hyperpage{188} - \subitem {pset\_arrays}, \hyperpage{194} - \subitem {pset\_probs}, \hyperpage{195} - \subitem {pset\_stats}, \hyperpage{195} - \subitem {rengine}, \hyperpage{195} - \subitem {rules}, \hyperpage{195} - \subitem {rules\_dyn}, \hyperpage{196} - \subitem {sample}, \hyperpage{189} - \subitem {set\_counters}, \hyperpage{189} - \subitem {set\_rengine}, \hyperpage{189} + \subitem {operator=}, \hyperpage{189} + \subitem {params\_last}, \hyperpage{195} + \subitem {print}, \hyperpage{189} + \subitem {print\_stats}, \hyperpage{189} + \subitem {pset\_arrays}, \hyperpage{195} + \subitem {pset\_probs}, \hyperpage{196} + \subitem {pset\_stats}, \hyperpage{196} + \subitem {rengine}, \hyperpage{196} + \subitem {rules}, \hyperpage{196} + \subitem {rules\_dyn}, \hyperpage{197} + \subitem {sample}, \hyperpage{189, 190} + \subitem {set\_counters}, \hyperpage{190} + \subitem {set\_rengine}, \hyperpage{190} \subitem {set\_rules}, \hyperpage{190} - \subitem {set\_rules\_dyn}, \hyperpage{190} - \subitem {set\_seed}, \hyperpage{190} - \subitem {set\_transform\_model}, \hyperpage{190} - \subitem {size}, \hyperpage{191} - \subitem {size\_unique}, \hyperpage{191} - \subitem {stats\_support}, \hyperpage{196} - \subitem {stats\_support\_n\_arrays}, \hyperpage{196} - \subitem {stats\_support\_sizes}, \hyperpage{196} - \subitem {stats\_support\_sizes\_acc}, \hyperpage{197} - \subitem {stats\_target}, \hyperpage{197} - \subitem {store\_psets}, \hyperpage{191} - \subitem {support\_fun}, \hyperpage{197} - \subitem {support\_size}, \hyperpage{191} - \subitem {transform\_model}, \hyperpage{191} - \subitem {transform\_model\_fun}, \hyperpage{197} - \subitem {transform\_model\_term\_names}, \hyperpage{198} - \subitem {update\_normalizing\_constants}, \hyperpage{192} - \subitem {with\_pset}, \hyperpage{198} + \subitem {set\_rules\_dyn}, \hyperpage{191} + \subitem {set\_seed}, \hyperpage{191} + \subitem {set\_transform\_model}, \hyperpage{191} + \subitem {size}, \hyperpage{192} + \subitem {size\_unique}, \hyperpage{192} + \subitem {stats\_support}, \hyperpage{197} + \subitem {stats\_support\_n\_arrays}, \hyperpage{197} + \subitem {stats\_support\_sizes}, \hyperpage{197} + \subitem {stats\_support\_sizes\_acc}, \hyperpage{198} + \subitem {stats\_target}, \hyperpage{198} + \subitem {store\_psets}, \hyperpage{192} + \subitem {support\_fun}, \hyperpage{198} + \subitem {support\_size}, \hyperpage{192} + \subitem {transform\_model}, \hyperpage{192} + \subitem {transform\_model\_fun}, \hyperpage{198} + \subitem {transform\_model\_term\_names}, \hyperpage{199} + \subitem {update\_normalizing\_constants}, \hyperpage{193} + \subitem {with\_pset}, \hyperpage{199} \item {model-\/meat.hpp} \subitem {likelihood\_}, \hyperpage{304} \subitem {update\_normalizing\_constant}, \hyperpage{304} @@ -1825,18 +1833,18 @@ \item {N} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{220} + \hyperpage{221} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{244} + \hyperpage{245} \item {n\_counters} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{244} + \hyperpage{245} \item {n\_free} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{220} + \hyperpage{221} \item {n\_locked} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{220} + \hyperpage{221} \item {name} \subitem {Counter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{133} \subitem {counters-\/meat.hpp}, \hyperpage{283} @@ -1845,7 +1853,7 @@ \item {nannotations} \subitem {Geese}, \hyperpage{168} \item {narray} - \subitem {Node}, \hyperpage{206} + \subitem {Node}, \hyperpage{207} \item {ncol} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{67} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -1857,11 +1865,11 @@ \subitem {network.hpp}, \hyperpage{299} \item {NetCounter} \subitem {network.hpp}, \hyperpage{300} - \item {NetCounterData}, \hyperpage{199} - \subitem {$\sim$NetCounterData}, \hyperpage{199} - \subitem {indices}, \hyperpage{200} - \subitem {NetCounterData}, \hyperpage{199} - \subitem {numbers}, \hyperpage{200} + \item {NetCounterData}, \hyperpage{200} + \subitem {$\sim$NetCounterData}, \hyperpage{200} + \subitem {indices}, \hyperpage{201} + \subitem {NetCounterData}, \hyperpage{200} + \subitem {numbers}, \hyperpage{201} \item {NetCounters} \subitem {network.hpp}, \hyperpage{300} \item {NetModel} @@ -1964,17 +1972,17 @@ \subitem {network.hpp}, \hyperpage{299} \item {NETWORK\_RULE\_LAMBDA} \subitem {network.hpp}, \hyperpage{300} - \item {NetworkData}, \hyperpage{200} - \subitem {$\sim$NetworkData}, \hyperpage{202} - \subitem {directed}, \hyperpage{202} - \subitem {NetworkData}, \hyperpage{201} - \subitem {vertex\_attr}, \hyperpage{202} + \item {NetworkData}, \hyperpage{201} + \subitem {$\sim$NetworkData}, \hyperpage{203} + \subitem {directed}, \hyperpage{203} + \subitem {NetworkData}, \hyperpage{202} + \subitem {vertex\_attr}, \hyperpage{203} \item {NetworkDense} \subitem {network.hpp}, \hyperpage{302} \item {NETWORKDENSE\_COUNTER\_LAMBDA} \subitem {network.hpp}, \hyperpage{300} \item {next} - \subitem {Progress}, \hyperpage{222} + \subitem {Progress}, \hyperpage{223} \item {nfunctions} \subitem {Flock}, \hyperpage{156} \subitem {Geese}, \hyperpage{173} @@ -1991,41 +1999,41 @@ \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{67} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{88} - \item {Node}, \hyperpage{202} - \subitem {$\sim$Node}, \hyperpage{204} - \subitem {annotations}, \hyperpage{205} - \subitem {array}, \hyperpage{205} - \subitem {arrays}, \hyperpage{206} - \subitem {duplication}, \hyperpage{206} - \subitem {get\_parent}, \hyperpage{205} - \subitem {id}, \hyperpage{206} - \subitem {is\_leaf}, \hyperpage{205} - \subitem {narray}, \hyperpage{206} - \subitem {Node}, \hyperpage{203, 204} - \subitem {noffspring}, \hyperpage{205} - \subitem {offspring}, \hyperpage{206} - \subitem {ord}, \hyperpage{207} - \subitem {parent}, \hyperpage{207} - \subitem {probability}, \hyperpage{207} - \subitem {subtree\_prob}, \hyperpage{207} - \subitem {visited}, \hyperpage{207} - \item {NodeData}, \hyperpage{208} - \subitem {blengths}, \hyperpage{209} - \subitem {duplication}, \hyperpage{209} - \subitem {NodeData}, \hyperpage{208} - \subitem {states}, \hyperpage{209} + \item {Node}, \hyperpage{203} + \subitem {$\sim$Node}, \hyperpage{205} + \subitem {annotations}, \hyperpage{206} + \subitem {array}, \hyperpage{206} + \subitem {arrays}, \hyperpage{207} + \subitem {duplication}, \hyperpage{207} + \subitem {get\_parent}, \hyperpage{206} + \subitem {id}, \hyperpage{207} + \subitem {is\_leaf}, \hyperpage{206} + \subitem {narray}, \hyperpage{207} + \subitem {Node}, \hyperpage{204, 205} + \subitem {noffspring}, \hyperpage{206} + \subitem {offspring}, \hyperpage{207} + \subitem {ord}, \hyperpage{208} + \subitem {parent}, \hyperpage{208} + \subitem {probability}, \hyperpage{208} + \subitem {subtree\_prob}, \hyperpage{208} + \subitem {visited}, \hyperpage{208} + \item {NodeData}, \hyperpage{209} + \subitem {blengths}, \hyperpage{210} + \subitem {duplication}, \hyperpage{210} + \subitem {NodeData}, \hyperpage{209} + \subitem {states}, \hyperpage{210} \item {nodes} \subitem {Geese}, \hyperpage{173} \item {noexcept} \subitem {counters-\/meat.hpp}, \hyperpage{286} \item {noffspring} - \subitem {Node}, \hyperpage{205} + \subitem {Node}, \hyperpage{206} \item {NONE} \subitem {CHECK}, \hyperpage{56} \subitem {EXISTS}, \hyperpage{58} \item {normalizing\_constants} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{194} + \hyperpage{195} \item {nrow} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{67} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -2033,10 +2041,10 @@ \subitem {Phylo rules}, \hyperpage{41} \item {nrules} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{187} + \hyperpage{188} \item {nrules\_dyn} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{187} + \hyperpage{188} \item {nterms} \subitem {Flock}, \hyperpage{154} \subitem {Geese}, \hyperpage{168} @@ -2047,7 +2055,7 @@ \item {num} \subitem {Phylo rules}, \hyperpage{41, 42} \item {numbers} - \subitem {NetCounterData}, \hyperpage{200} + \subitem {NetCounterData}, \hyperpage{201} \subitem {Phylo rules}, \hyperpage{45, 46} \indexspace @@ -2057,7 +2065,7 @@ \item {observed\_counts} \subitem {Geese}, \hyperpage{169} \item {offspring} - \subitem {Node}, \hyperpage{206} + \subitem {Node}, \hyperpage{207} \item {ONE} \subitem {CHECK}, \hyperpage{56} \subitem {EXISTS}, \hyperpage{58} @@ -2139,11 +2147,11 @@ \hyperpage{108} \subitem {Flock}, \hyperpage{154} \subitem {Phylo rules}, \hyperpage{42} - \subitem {PhyloCounterData}, \hyperpage{211} - \subitem {PhyloRuleDynData}, \hyperpage{213} - \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{225} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{228} - \subitem {vecHasher$<$ T $>$}, \hyperpage{245} + \subitem {PhyloCounterData}, \hyperpage{212} + \subitem {PhyloRuleDynData}, \hyperpage{214} + \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{226} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{229} + \subitem {vecHasher$<$ T $>$}, \hyperpage{246} \item {operator+=} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{68} \subitem {BArrayCell$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{75} @@ -2190,8 +2198,8 @@ \subitem {Counters$<$ Array\_Type, Data\_Type $>$}, \hyperpage{137} \subitem {Geese}, \hyperpage{169} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{188} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{229} + \hyperpage{189} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{230} \item {operator==} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{69} \subitem {BArrayCell$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{76} @@ -2211,11 +2219,11 @@ \subitem {Cell$<$ Cell\_Type $>$}, \hyperpage{125} \item {operator[]} \subitem {Counters$<$ Array\_Type, Data\_Type $>$}, \hyperpage{138} - \subitem {PhyloCounterData}, \hyperpage{211} + \subitem {PhyloCounterData}, \hyperpage{212} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{218} + \hyperpage{219} \item {ord} - \subitem {Node}, \hyperpage{207} + \subitem {Node}, \hyperpage{208} \item {out\_of\_range} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{69} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -2225,9 +2233,9 @@ \item {params\_last} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{194} + \hyperpage{195} \item {parent} - \subitem {Node}, \hyperpage{207} + \subitem {Node}, \hyperpage{208} \item {parse\_polytomies} \subitem {Flock}, \hyperpage{155} \subitem {Geese}, \hyperpage{169} @@ -2306,19 +2314,19 @@ \subitem {geese-\/types.hpp}, \hyperpage{325} \item {PhyloCounter} \subitem {geese-\/types.hpp}, \hyperpage{325} - \item {PhyloCounterData}, \hyperpage{209} - \subitem {at}, \hyperpage{210} - \subitem {begin}, \hyperpage{210} - \subitem {empty}, \hyperpage{210} - \subitem {end}, \hyperpage{211} - \subitem {get\_counters}, \hyperpage{211} - \subitem {operator()}, \hyperpage{211} - \subitem {operator[]}, \hyperpage{211} - \subitem {PhyloCounterData}, \hyperpage{210} - \subitem {push\_back}, \hyperpage{211} - \subitem {reserve}, \hyperpage{211} - \subitem {shrink\_to\_fit}, \hyperpage{212} - \subitem {size}, \hyperpage{212} + \item {PhyloCounterData}, \hyperpage{210} + \subitem {at}, \hyperpage{211} + \subitem {begin}, \hyperpage{211} + \subitem {empty}, \hyperpage{211} + \subitem {end}, \hyperpage{212} + \subitem {get\_counters}, \hyperpage{212} + \subitem {operator()}, \hyperpage{212} + \subitem {operator[]}, \hyperpage{212} + \subitem {PhyloCounterData}, \hyperpage{211} + \subitem {push\_back}, \hyperpage{212} + \subitem {reserve}, \hyperpage{212} + \subitem {shrink\_to\_fit}, \hyperpage{213} + \subitem {size}, \hyperpage{213} \item {PhyloCounters} \subitem {geese-\/types.hpp}, \hyperpage{325} \item {PhyloModel} @@ -2331,15 +2339,15 @@ \subitem {geese-\/types.hpp}, \hyperpage{326} \item {PhyloRuleDyn} \subitem {geese-\/types.hpp}, \hyperpage{326} - \item {PhyloRuleDynData}, \hyperpage{212} - \subitem {$\sim$PhyloRuleDynData}, \hyperpage{213} - \subitem {counts}, \hyperpage{213} - \subitem {duplication}, \hyperpage{213} - \subitem {lb}, \hyperpage{214} - \subitem {operator()}, \hyperpage{213} - \subitem {PhyloRuleDynData}, \hyperpage{213} - \subitem {pos}, \hyperpage{214} - \subitem {ub}, \hyperpage{214} + \item {PhyloRuleDynData}, \hyperpage{213} + \subitem {$\sim$PhyloRuleDynData}, \hyperpage{214} + \subitem {counts}, \hyperpage{214} + \subitem {duplication}, \hyperpage{214} + \subitem {lb}, \hyperpage{215} + \subitem {operator()}, \hyperpage{214} + \subitem {PhyloRuleDynData}, \hyperpage{214} + \subitem {pos}, \hyperpage{215} + \subitem {ub}, \hyperpage{215} \item {PhyloRules} \subitem {geese-\/types.hpp}, \hyperpage{326} \item {PhyloRulesDyn} @@ -2357,7 +2365,7 @@ \subitem {barraydenserow-\/bones.hpp}, \hyperpage{263} \subitem {geese-\/types.hpp}, \hyperpage{324} \item {pos} - \subitem {PhyloRuleDynData}, \hyperpage{214} + \subitem {PhyloRuleDynData}, \hyperpage{215} \item {POS\_N} \subitem {barraydense-\/meat-\/operators.hpp}, \hyperpage{256} \subitem {barraydense-\/meat.hpp}, \hyperpage{259} @@ -2365,31 +2373,31 @@ \subitem {barraydenserow-\/bones.hpp}, \hyperpage{263} \item {PowerSet} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{216} + \hyperpage{217} \item {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{214} - \subitem {$\sim$PowerSet}, \hyperpage{216} - \subitem {add\_rule}, \hyperpage{216, 217} - \subitem {begin}, \hyperpage{217} - \subitem {calc}, \hyperpage{217} - \subitem {coordinates\_free}, \hyperpage{219} - \subitem {coordinates\_locked}, \hyperpage{219} - \subitem {data}, \hyperpage{219} - \subitem {EmptyArray}, \hyperpage{219} - \subitem {end}, \hyperpage{217} - \subitem {get\_data}, \hyperpage{217} - \subitem {get\_data\_ptr}, \hyperpage{218} - \subitem {init\_support}, \hyperpage{218} - \subitem {M}, \hyperpage{219} - \subitem {N}, \hyperpage{220} - \subitem {n\_free}, \hyperpage{220} - \subitem {n\_locked}, \hyperpage{220} - \subitem {operator[]}, \hyperpage{218} - \subitem {PowerSet}, \hyperpage{216} - \subitem {reset}, \hyperpage{218} - \subitem {rules}, \hyperpage{220} - \subitem {rules\_deleted}, \hyperpage{220} - \subitem {size}, \hyperpage{218} + \hyperpage{215} + \subitem {$\sim$PowerSet}, \hyperpage{217} + \subitem {add\_rule}, \hyperpage{217, 218} + \subitem {begin}, \hyperpage{218} + \subitem {calc}, \hyperpage{218} + \subitem {coordinates\_free}, \hyperpage{220} + \subitem {coordinates\_locked}, \hyperpage{220} + \subitem {data}, \hyperpage{220} + \subitem {EmptyArray}, \hyperpage{220} + \subitem {end}, \hyperpage{218} + \subitem {get\_data}, \hyperpage{218} + \subitem {get\_data\_ptr}, \hyperpage{219} + \subitem {init\_support}, \hyperpage{219} + \subitem {M}, \hyperpage{220} + \subitem {N}, \hyperpage{221} + \subitem {n\_free}, \hyperpage{221} + \subitem {n\_locked}, \hyperpage{221} + \subitem {operator[]}, \hyperpage{219} + \subitem {PowerSet}, \hyperpage{217} + \subitem {reset}, \hyperpage{219} + \subitem {rules}, \hyperpage{221} + \subitem {rules\_deleted}, \hyperpage{221} + \subitem {size}, \hyperpage{219} \item {predict} \subitem {Geese}, \hyperpage{169} \item {predict\_backend} @@ -2409,10 +2417,10 @@ \subitem {FreqTable$<$ T $>$}, \hyperpage{159} \subitem {Geese}, \hyperpage{170} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{188} + \hyperpage{189} \subitem {Phylo rules}, \hyperpage{42} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{240} + \hyperpage{241} \item {print\_n} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{70} \item {print\_nodes} @@ -2421,33 +2429,33 @@ \subitem {Geese}, \hyperpage{171} \item {print\_stats} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{188} + \hyperpage{189} \item {printf\_barry} \subitem {barry-\/configuration.hpp}, \hyperpage{267} \item {probability} - \subitem {Node}, \hyperpage{207} - \item {Progress}, \hyperpage{221} - \subitem {$\sim$Progress}, \hyperpage{221} - \subitem {end}, \hyperpage{222} - \subitem {next}, \hyperpage{222} - \subitem {Progress}, \hyperpage{221} + \subitem {Node}, \hyperpage{208} + \item {Progress}, \hyperpage{222} + \subitem {$\sim$Progress}, \hyperpage{222} + \subitem {end}, \hyperpage{223} + \subitem {next}, \hyperpage{223} + \subitem {Progress}, \hyperpage{222} \item {progress.hpp} \subitem {BARRY\_PROGRESS\_BAR\_WIDTH}, \hyperpage{329} \item {pset\_arrays} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{194} + \hyperpage{195} \item {pset\_loc} \subitem {Geese}, \hyperpage{173} \item {pset\_loop} \subitem {geese-\/meat-\/likelihood.hpp}, \hyperpage{319} \item {pset\_probs} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{195} + \hyperpage{196} \item {pset\_stats} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{195} + \hyperpage{196} \item {push\_back} - \subitem {PhyloCounterData}, \hyperpage{211} + \subitem {PhyloCounterData}, \hyperpage{212} \indexspace @@ -2457,7 +2465,7 @@ \item {rengine} \subitem {Flock}, \hyperpage{156} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{195} + \hyperpage{196} \item {res} \subitem {counters-\/meat.hpp}, \hyperpage{286} \item {reserve} @@ -2465,15 +2473,15 @@ \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{91} \subitem {FreqTable$<$ T $>$}, \hyperpage{159} - \subitem {PhyloCounterData}, \hyperpage{211} + \subitem {PhyloCounterData}, \hyperpage{212} \item {reset} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{218} + \hyperpage{219} \item {reset\_array} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{232} + \hyperpage{233} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{240} + \hyperpage{241} \item {resize} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{70} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -2504,14 +2512,14 @@ \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{92} \item {Rule} - \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{223} - \item {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{222} - \subitem {$\sim$Rule}, \hyperpage{223} - \subitem {D}, \hyperpage{224} - \subitem {get\_description}, \hyperpage{224} - \subitem {get\_name}, \hyperpage{224} - \subitem {operator()}, \hyperpage{225} - \subitem {Rule}, \hyperpage{223} + \subitem {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{224} + \item {Rule$<$ Array\_Type, Data\_Type $>$}, \hyperpage{223} + \subitem {$\sim$Rule}, \hyperpage{224} + \subitem {D}, \hyperpage{225} + \subitem {get\_description}, \hyperpage{225} + \subitem {get\_name}, \hyperpage{225} + \subitem {operator()}, \hyperpage{226} + \subitem {Rule}, \hyperpage{224} \item {rule\_dyn\_limit\_changes} \subitem {Phylo rules}, \hyperpage{42} \item {rule\_fun\_default} @@ -2524,34 +2532,34 @@ \item {RULE\_LAMBDA} \subitem {barry.hpp}, \hyperpage{273} \item {Rules} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{226} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{227} \item {rules} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{195} + \hyperpage{196} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{220} - \item {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{225} - \subitem {$\sim$Rules}, \hyperpage{226} - \subitem {add\_rule}, \hyperpage{227} - \subitem {begin}, \hyperpage{227} - \subitem {end}, \hyperpage{227} - \subitem {get\_descriptions}, \hyperpage{227} - \subitem {get\_names}, \hyperpage{228} - \subitem {get\_seq}, \hyperpage{228} - \subitem {operator()}, \hyperpage{228} - \subitem {operator=}, \hyperpage{229} - \subitem {Rules}, \hyperpage{226} - \subitem {size}, \hyperpage{229} + \hyperpage{221} + \item {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{226} + \subitem {$\sim$Rules}, \hyperpage{227} + \subitem {add\_rule}, \hyperpage{228} + \subitem {begin}, \hyperpage{228} + \subitem {end}, \hyperpage{228} + \subitem {get\_descriptions}, \hyperpage{228} + \subitem {get\_names}, \hyperpage{229} + \subitem {get\_seq}, \hyperpage{229} + \subitem {operator()}, \hyperpage{229} + \subitem {operator=}, \hyperpage{230} + \subitem {Rules}, \hyperpage{227} + \subitem {size}, \hyperpage{230} \item {rules-\/bones.hpp} \subitem {rule\_fun\_default}, \hyperpage{329} \item {rules\_deleted} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{220} + \hyperpage{221} \item {rules\_dont\_become\_zero} \subitem {Network counters}, \hyperpage{34} \item {rules\_dyn} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{196} + \hyperpage{197} \item {rules\_markov\_fixed} \subitem {Network counters}, \hyperpage{35} \item {rules\_zerodiag} @@ -2561,16 +2569,16 @@ \item {sample} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{189} + \hyperpage{189, 190} \item {sequence} \subitem {Geese}, \hyperpage{174} \item {set\_counters} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{189} + \hyperpage{190} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{233} + \hyperpage{234} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{240} + \hyperpage{241} \item {set\_data} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{71} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -2581,27 +2589,27 @@ \subitem {DEFM}, \hyperpage{143} \item {set\_rengine} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{189} + \hyperpage{190} \item {set\_rules} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, \hyperpage{190} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{241} + \hyperpage{242} \item {set\_rules\_dyn} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{190} + \hyperpage{191} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{241} + \hyperpage{242} \item {set\_seed} \subitem {Flock}, \hyperpage{155} \subitem {Geese}, \hyperpage{171} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{190} + \hyperpage{191} \item {set\_transform\_model} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{190} + \hyperpage{191} \item {shrink\_to\_fit} - \subitem {PhyloCounterData}, \hyperpage{212} + \subitem {PhyloCounterData}, \hyperpage{213} \item {simulate} \subitem {DEFM}, \hyperpage{143} \subitem {Geese}, \hyperpage{171} @@ -2621,54 +2629,54 @@ \subitem {Counters$<$ Array\_Type, Data\_Type $>$}, \hyperpage{138} \subitem {FreqTable$<$ T $>$}, \hyperpage{160} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{191} - \subitem {PhyloCounterData}, \hyperpage{212} + \hyperpage{192} + \subitem {PhyloCounterData}, \hyperpage{213} \subitem {PowerSet$<$ Array\_Type, Data\_Rule\_Type $>$}, - \hyperpage{218} - \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{229} + \hyperpage{219} + \subitem {Rules$<$ Array\_Type, Data\_Type $>$}, \hyperpage{230} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{233} + \hyperpage{234} \item {size\_unique} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{191} + \hyperpage{192} \item {sort\_array} \subitem {typedefs.hpp}, \hyperpage{341} \item {source} \subitem {Entries$<$ Cell\_Type $>$}, \hyperpage{149} \item {states} - \subitem {NodeData}, \hyperpage{209} + \subitem {NodeData}, \hyperpage{210} \item {Statistical Models}, \hyperpage{24} \item {stats\_support} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{196} + \hyperpage{197} \item {stats\_support\_n\_arrays} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{196} + \hyperpage{197} \item {stats\_support\_sizes} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{196} + \hyperpage{197} \item {stats\_support\_sizes\_acc} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{197} + \hyperpage{198} \item {stats\_target} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{197} + \hyperpage{198} \item {StatsCounter} \subitem {StatsCounter$<$ Array\_Type, Data\_Type $>$}, - \hyperpage{230, 231} - \item {StatsCounter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{229} - \subitem {$\sim$StatsCounter}, \hyperpage{231} - \subitem {add\_counter}, \hyperpage{231} - \subitem {count\_all}, \hyperpage{231} - \subitem {count\_current}, \hyperpage{232} - \subitem {count\_init}, \hyperpage{232} - \subitem {get\_counters}, \hyperpage{232} - \subitem {get\_descriptions}, \hyperpage{232} - \subitem {get\_names}, \hyperpage{232} - \subitem {reset\_array}, \hyperpage{232} - \subitem {set\_counters}, \hyperpage{233} - \subitem {size}, \hyperpage{233} - \subitem {StatsCounter}, \hyperpage{230, 231} + \hyperpage{231, 232} + \item {StatsCounter$<$ Array\_Type, Data\_Type $>$}, \hyperpage{230} + \subitem {$\sim$StatsCounter}, \hyperpage{232} + \subitem {add\_counter}, \hyperpage{232} + \subitem {count\_all}, \hyperpage{232} + \subitem {count\_current}, \hyperpage{233} + \subitem {count\_init}, \hyperpage{233} + \subitem {get\_counters}, \hyperpage{233} + \subitem {get\_descriptions}, \hyperpage{233} + \subitem {get\_names}, \hyperpage{233} + \subitem {reset\_array}, \hyperpage{233} + \subitem {set\_counters}, \hyperpage{234} + \subitem {size}, \hyperpage{234} + \subitem {StatsCounter}, \hyperpage{231, 232} \item {statscounter-\/meat.hpp} \subitem {clear}, \hyperpage{332} \subitem {counter}, \hyperpage{334} @@ -2693,58 +2701,58 @@ \subitem {statscounter-\/meat.hpp}, \hyperpage{332} \item {store\_psets} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{191} + \hyperpage{192} \item {subtree\_prob} - \subitem {Node}, \hyperpage{207} + \subitem {Node}, \hyperpage{208} \item {Support} \subitem {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{235, 236} + \hyperpage{236, 237} \item {Support$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{233} - \subitem {$\sim$Support}, \hyperpage{236} - \subitem {add\_counter}, \hyperpage{236} - \subitem {add\_rule}, \hyperpage{236, 237} - \subitem {add\_rule\_dyn}, \hyperpage{237} - \subitem {calc}, \hyperpage{237} - \subitem {change\_stats}, \hyperpage{241} - \subitem {coordiantes\_n\_free}, \hyperpage{241} - \subitem {coordiantes\_n\_locked}, \hyperpage{242} - \subitem {coordinates\_free}, \hyperpage{242} - \subitem {coordinates\_locked}, \hyperpage{242} - \subitem {current\_stats}, \hyperpage{242} - \subitem {delete\_counters}, \hyperpage{242} - \subitem {delete\_rules}, \hyperpage{243} - \subitem {delete\_rules\_dyn}, \hyperpage{243} - \subitem {eval\_rules\_dyn}, \hyperpage{238} - \subitem {get\_counters}, \hyperpage{238} - \subitem {get\_counts}, \hyperpage{238} - \subitem {get\_current\_stats}, \hyperpage{238} - \subitem {get\_data}, \hyperpage{239} - \subitem {get\_rules}, \hyperpage{239} - \subitem {get\_rules\_dyn}, \hyperpage{239} - \subitem {hashes}, \hyperpage{243} - \subitem {hashes\_initialized}, \hyperpage{243} - \subitem {init\_support}, \hyperpage{239} - \subitem {M}, \hyperpage{243} - \subitem {max\_num\_elements}, \hyperpage{244} - \subitem {N}, \hyperpage{244} - \subitem {n\_counters}, \hyperpage{244} - \subitem {print}, \hyperpage{240} - \subitem {reset\_array}, \hyperpage{240} - \subitem {set\_counters}, \hyperpage{240} - \subitem {set\_rules}, \hyperpage{241} - \subitem {set\_rules\_dyn}, \hyperpage{241} - \subitem {Support}, \hyperpage{235, 236} + \hyperpage{234} + \subitem {$\sim$Support}, \hyperpage{237} + \subitem {add\_counter}, \hyperpage{237} + \subitem {add\_rule}, \hyperpage{237, 238} + \subitem {add\_rule\_dyn}, \hyperpage{238} + \subitem {calc}, \hyperpage{238} + \subitem {change\_stats}, \hyperpage{242} + \subitem {coordiantes\_n\_free}, \hyperpage{242} + \subitem {coordiantes\_n\_locked}, \hyperpage{243} + \subitem {coordinates\_free}, \hyperpage{243} + \subitem {coordinates\_locked}, \hyperpage{243} + \subitem {current\_stats}, \hyperpage{243} + \subitem {delete\_counters}, \hyperpage{243} + \subitem {delete\_rules}, \hyperpage{244} + \subitem {delete\_rules\_dyn}, \hyperpage{244} + \subitem {eval\_rules\_dyn}, \hyperpage{239} + \subitem {get\_counters}, \hyperpage{239} + \subitem {get\_counts}, \hyperpage{239} + \subitem {get\_current\_stats}, \hyperpage{239} + \subitem {get\_data}, \hyperpage{240} + \subitem {get\_rules}, \hyperpage{240} + \subitem {get\_rules\_dyn}, \hyperpage{240} + \subitem {hashes}, \hyperpage{244} + \subitem {hashes\_initialized}, \hyperpage{244} + \subitem {init\_support}, \hyperpage{240} + \subitem {M}, \hyperpage{244} + \subitem {max\_num\_elements}, \hyperpage{245} + \subitem {N}, \hyperpage{245} + \subitem {n\_counters}, \hyperpage{245} + \subitem {print}, \hyperpage{241} + \subitem {reset\_array}, \hyperpage{241} + \subitem {set\_counters}, \hyperpage{241} + \subitem {set\_rules}, \hyperpage{242} + \subitem {set\_rules\_dyn}, \hyperpage{242} + \subitem {Support}, \hyperpage{236, 237} \item {support-\/meat.hpp} \subitem {BARRY\_SUPPORT\_MEAT\_HPP}, \hyperpage{337} \item {support\_fun} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{197} + \hyperpage{198} \item {support\_size} \subitem {Flock}, \hyperpage{155} \subitem {Geese}, \hyperpage{171} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{191} + \hyperpage{192} \item {swap\_cells} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{71} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -2776,13 +2784,13 @@ \hyperpage{94} \item {transform\_model} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{191} + \hyperpage{192} \item {transform\_model\_fun} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{197} + \hyperpage{198} \item {transform\_model\_term\_names} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{198} + \hyperpage{199} \item {transpose} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{72} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, @@ -2806,7 +2814,7 @@ \indexspace \item {ub} - \subitem {PhyloRuleDynData}, \hyperpage{214} + \subitem {PhyloRuleDynData}, \hyperpage{215} \item {UKNOWN} \subitem {EXISTS}, \hyperpage{58} \item {UNI\_SUB} @@ -2817,7 +2825,7 @@ \subitem {model-\/meat.hpp}, \hyperpage{304} \item {update\_normalizing\_constants} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{192} + \hyperpage{193} \indexspace @@ -2833,24 +2841,24 @@ \subitem {typedefs.hpp}, \hyperpage{342} \item {vec\_inner\_prod} \subitem {typedefs.hpp}, \hyperpage{342, 343} - \item {vecHasher$<$ T $>$}, \hyperpage{244} - \subitem {operator()}, \hyperpage{245} + \item {vecHasher$<$ T $>$}, \hyperpage{245} + \subitem {operator()}, \hyperpage{246} \item {vector\_caster} \subitem {geese-\/bones.hpp}, \hyperpage{318} \item {vertex\_attr} - \subitem {NetworkData}, \hyperpage{202} + \subitem {NetworkData}, \hyperpage{203} \item {visited} \subitem {BArray$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{73} \subitem {BArrayDense$<$ Cell\_Type, Data\_Type $>$}, \hyperpage{96} \subitem {Cell$<$ Cell\_Type $>$}, \hyperpage{125} - \subitem {Node}, \hyperpage{207} + \subitem {Node}, \hyperpage{208} \indexspace \item {with\_pset} \subitem {Model$<$ Array\_Type, Data\_Counter\_Type, Data\_Rule\_Type, Data\_Rule\_Dyn\_Type $>$}, - \hyperpage{198} + \hyperpage{199} \indexspace diff --git a/latex/refman.log b/latex/refman.log index dbd1e2668..b675f6803 100644 --- a/latex/refman.log +++ b/latex/refman.log @@ -1,4 +1,4 @@ -This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Alpine Linux) (preloaded format=pdflatex 2023.10.4) 4 OCT 2023 18:13 +This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Alpine Linux) (preloaded format=pdflatex 2023.10.4) 4 OCT 2023 18:30 entering extended mode restricted \write18 enabled. %&-line parsing enabled. @@ -1191,7 +1191,7 @@ hylo.pdf pdfTeX warning: pdflatex (file ./group__rules-phylo.pdf): PDF inclusion: multip le pdfs with page group included in a single page > - + File: group__rules-phylo.pdf Graphic file (type pdf) Package pdftex.def Info: group__rules-phylo.pdf used on input line 13. @@ -1234,7 +1234,7 @@ Underfull \hbox (badness 10000) detected at line 470 pdfTeX warning: pdflatex (file ./group__counters-phylo.pdf): PDF inclusion: mul tiple pdfs with page group included in a single page > - + File: group__counters-phylo.pdf Graphic file (type pdf) Package pdftex.def Info: group__counters-phylo.pdf used on input line 13. @@ -1865,7 +1865,7 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): pdfTeX warning: pdflatex (file ./class_const_b_array_row_iter__coll__graph.pdf) : PDF inclusion: multiple pdfs with page group included in a single page > - File: class_const_b_array_row_iter__coll__graph.pdf Graphic file (type pdf) @@ -1956,7 +1956,7 @@ Underfull \hbox (badness 10000) detected at line 235 pdfTeX warning: pdflatex (file ./class_d_e_f_m__inherit__graph.pdf): PDF inclus ion: multiple pdfs with page group included in a single page > - + File: class_d_e_f_m__inherit__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_d_e_f_m__inherit__graph.pdf used on input line @@ -1967,7 +1967,7 @@ Package pdftex.def Info: class_d_e_f_m__inherit__graph.pdf used on input line pdfTeX warning: pdflatex (file ./class_d_e_f_m__coll__graph.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: class_d_e_f_m__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_d_e_f_m__coll__graph.pdf used on input line 24. @@ -1980,7 +1980,7 @@ m_rule_data__inherit__graph.pdf pdfTeX warning: pdflatex (file ./class_d_e_f_m_rule_data__inherit__graph.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: class_d_e_f_m_rule_data__inherit__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_d_e_f_m_rule_data__inherit__graph.pdf used on i @@ -1992,7 +1992,7 @@ rit__graph.pdf pdfTeX warning: pdflatex (file ./class_d_e_f_m_rule_dyn_data__inherit__graph.pd f): PDF inclusion: multiple pdfs with page group included in a single page > - File: class_d_e_f_m_rule_dyn_data__inherit__graph.pdf Graphic file (type pdf) @@ -2000,7 +2000,7 @@ Package pdftex.def Info: class_d_e_f_m_rule_dyn_data__inherit__graph.pdf used on input line 14. (pdftex.def) Requested size: 180.0pt x 156.00162pt. [146] <./class_d_e_f_m_rule_dyn_data__coll__graph.pdf> - + File: class_d_e_f_m_rule_dyn_data__coll__graph.pdf Graphic file (type pdf) @@ -2115,7 +2115,7 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): pdfTeX warning: pdflatex (file ./class_model__coll__graph.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: class_model__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_model__coll__graph.pdf used on input line 19. @@ -2140,51 +2140,51 @@ Underfull \hbox (badness 10000) detected at line 142 [] [177] -Underfull \hbox (badness 1436) in paragraph at lines 220--221 +Underfull \hbox (badness 1436) in paragraph at lines 224--225 []\T1/pcr/m/sl/10 stats[]_[]target \T1/phv/m/sl/10 holds the ob-served suf-fi-c ient statis-tics for each ar-ray in the dataset. \T1/pcr/m/sl/10 array[]_[] [] [178] LaTeX Font Info: Font shape `T1/phv/m/n' will be -(Font) scaled to size 4.49997pt on input line 278. +(Font) scaled to size 4.49997pt on input line 282. -Underfull \hbox (badness 10000) in paragraph at lines 302--304 +Underfull \hbox (badness 10000) in paragraph at lines 306--308 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 313--315 +Underfull \hbox (badness 10000) in paragraph at lines 317--319 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] - -Underfull \hbox (badness 10000) in paragraph at lines 324--326 +[179] +Underfull \hbox (badness 10000) in paragraph at lines 328--330 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 324--326 +Underfull \hbox (badness 10000) in paragraph at lines 328--330 | \T1/pcr/m/n/8 const []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Da ta[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][] Dyn[]_[][]Type $\OML/cmm/m/it/8 >$ [] -[179] -Underfull \hbox (badness 10000) in paragraph at lines 335--337 + +Underfull \hbox (badness 10000) in paragraph at lines 339--341 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 335--337 +Underfull \hbox (badness 10000) in paragraph at lines 339--341 \T1/pcr/m/n/8 virtual []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Dat a[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]D yn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::$\OMS/cmsy/m/n/8 ^^X$[] \T1/ @@ -2192,129 +2192,133 @@ pcr/m/n/8 ( [] -Underfull \hbox (badness 10000) in paragraph at lines 349--351 +Underfull \hbox (badness 10000) in paragraph at lines 353--355 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) detected at line 363 +Overfull \vbox (20.23207pt too high) has occurred while \output is active [] + + +[180] +Underfull \hbox (badness 10000) detected at line 367 [][][] [] -Underfull \hbox (badness 10000) in paragraph at lines 374--376 +Underfull \hbox (badness 10000) in paragraph at lines 378--380 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -[180] -Underfull \hbox (badness 10000) in paragraph at lines 385--387 + +Underfull \hbox (badness 10000) in paragraph at lines 389--391 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 396--398 +Underfull \hbox (badness 10000) in paragraph at lines 400--402 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 407--409 +Underfull \hbox (badness 10000) in paragraph at lines 411--413 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 418--420 +Underfull \hbox (badness 10000) in paragraph at lines 422--424 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] - -Underfull \hbox (badness 10000) in paragraph at lines 425--427 +[181] +Underfull \hbox (badness 10000) in paragraph at lines 429--431 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 425--427 +Underfull \hbox (badness 10000) in paragraph at lines 429--431 \T1/pcr/m/n/8 void []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::add[]_[]rule[]_[]dyn [] -[181] -Underfull \hbox (badness 10000) in paragraph at lines 436--438 + +Underfull \hbox (badness 10000) in paragraph at lines 440--442 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 436--438 +Underfull \hbox (badness 10000) in paragraph at lines 440--442 \T1/pcr/m/n/8 void []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::add[]_[]rule[]_[]dyn [] -Underfull \hbox (badness 10000) in paragraph at lines 447--449 +Underfull \hbox (badness 10000) in paragraph at lines 451--453 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 447--449 +Underfull \hbox (badness 10000) in paragraph at lines 451--453 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::string $\OM L/cmm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][] Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 458--460 +Underfull \hbox (badness 10000) in paragraph at lines 462--464 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] [182] -Underfull \hbox (badness 10000) detected at line 478 +Underfull \hbox (badness 10000) detected at line 482 [][][] [] -Underfull \hbox (badness 10000) in paragraph at lines 489--491 +Underfull \hbox (badness 10000) in paragraph at lines 493--495 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 489--491 +Underfull \hbox (badness 10000) in paragraph at lines 493--495 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m /it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, D ata[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 500--502 +Underfull \hbox (badness 10000) in paragraph at lines 504--506 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 500--502 +Underfull \hbox (badness 10000) in paragraph at lines 504--506 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c mm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_ [][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][ @@ -2322,28 +2326,28 @@ mm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_ [] -Underfull \hbox (badness 10000) in paragraph at lines 511--513 +Underfull \hbox (badness 10000) in paragraph at lines 515--517 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 511--513 +Underfull \hbox (badness 10000) in paragraph at lines 515--517 []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][] Type $\OML/cmm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/ n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[] [] -Underfull \hbox (badness 10000) in paragraph at lines 522--524 +Underfull \hbox (badness 10000) in paragraph at lines 526--528 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 522--524 +Underfull \hbox (badness 10000) in paragraph at lines 526--528 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m /it/8 >$ \T1/pcr/m/n/8 & []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] @@ -2351,21 +2355,21 @@ Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] [] -Underfull \hbox (badness 10000) in paragraph at lines 533--535 +Underfull \hbox (badness 10000) in paragraph at lines 537--539 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] [183] -Underfull \hbox (badness 10000) in paragraph at lines 544--546 +Underfull \hbox (badness 10000) in paragraph at lines 548--550 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 544--546 +Underfull \hbox (badness 10000) in paragraph at lines 548--550 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type $\OML/cmm/m/it/8 >$ $>$ $\OMS/cms y/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]C @@ -2373,14 +2377,14 @@ ounter[]_[][]Type, Data[]_[][]Rule[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 555--557 +Underfull \hbox (badness 10000) in paragraph at lines 559--561 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 555--557 +Underfull \hbox (badness 10000) in paragraph at lines 559--561 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m/it/8 >$ $>$ $\OMS/cmsy/m/n/8 ^^ C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[ @@ -2388,14 +2392,14 @@ C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[ [] -Underfull \hbox (badness 10000) in paragraph at lines 566--568 +Underfull \hbox (badness 10000) in paragraph at lines 570--572 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 566--568 +Underfull \hbox (badness 10000) in paragraph at lines 570--572 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m/it/8 >$ $>$ $\OMS/cmsy/m/n/8 ^^ C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[ @@ -2403,14 +2407,14 @@ C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[ [] -Underfull \hbox (badness 10000) in paragraph at lines 581--583 +Underfull \hbox (badness 10000) in paragraph at lines 585--587 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 581--583 +Underfull \hbox (badness 10000) in paragraph at lines 585--587 \T1/pcr/m/n/8 const std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML /cmm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[ ]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[ @@ -2418,42 +2422,42 @@ Underfull \hbox (badness 10000) in paragraph at lines 581--583 [] [184] -Underfull \hbox (badness 10000) in paragraph at lines 592--594 +Underfull \hbox (badness 10000) in paragraph at lines 596--598 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 592--594 +Underfull \hbox (badness 10000) in paragraph at lines 596--598 \T1/pcr/m/n/8 const std[]::mt19937 $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[ ]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][]Type [] -Underfull \hbox (badness 10000) in paragraph at lines 603--605 +Underfull \hbox (badness 10000) in paragraph at lines 607--609 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 603--605 +Underfull \hbox (badness 10000) in paragraph at lines 607--609 []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Rule[]_[][]Typ e $\OML/cmm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, [] -Underfull \hbox (badness 10000) in paragraph at lines 614--616 +Underfull \hbox (badness 10000) in paragraph at lines 618--620 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 614--616 +Underfull \hbox (badness 10000) in paragraph at lines 618--620 []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn []_[][]Type $\OML/cmm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1 /pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[ @@ -2461,14 +2465,14 @@ Underfull \hbox (badness 10000) in paragraph at lines 614--616 [] -Underfull \hbox (badness 10000) in paragraph at lines 625--627 +Underfull \hbox (badness 10000) in paragraph at lines 629--631 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 625--627 +Underfull \hbox (badness 10000) in paragraph at lines 629--631 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m /it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][] Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rul @@ -2476,505 +2480,539 @@ e[]_[][]Dyn[] [] -Underfull \hbox (badness 10000) in paragraph at lines 636--638 +Underfull \hbox (badness 10000) in paragraph at lines 644--646 +\T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ +e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ +e , typename + [] + + +Underfull \hbox (badness 10000) in paragraph at lines 644--646 +\T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c +mm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_ +[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][ +]Rule[]_[][]Dyn[] + [] + +[185] +Underfull \hbox (badness 10000) in paragraph at lines 659--661 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 636--638 +Underfull \hbox (badness 10000) in paragraph at lines 659--661 +\T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c +mm/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_ +[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][ +]Rule[]_[][]Dyn[] + [] + + +Underfull \hbox (badness 10000) in paragraph at lines 674--676 +\T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ +e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ +e , typename + [] + + +Underfull \hbox (badness 10000) in paragraph at lines 674--676 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m/it/8 >$ $>$ $\OMS/cmsy/m/n/8 ^^ C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[ ][]Type, Data[]_[][]Rule[]_[][]Type, [] -[185] -Underfull \hbox (badness 10000) in paragraph at lines 651--653 + +Underfull \hbox (badness 10000) in paragraph at lines 689--691 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 651--653 +Underfull \hbox (badness 10000) in paragraph at lines 689--691 []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][] Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][]Type $\OML/cm m/m/it/8 >$ $\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[] [] -Underfull \hbox (badness 10000) in paragraph at lines 662--664 +Underfull \hbox (badness 10000) in paragraph at lines 700--702 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 662--664 +Underfull \hbox (badness 10000) in paragraph at lines 700--702 \T1/pcr/m/n/8 double []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data []_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dy n[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::likelihood [] - -Underfull \hbox (badness 10000) in paragraph at lines 673--675 +[186] +Underfull \hbox (badness 10000) in paragraph at lines 711--713 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 673--675 +Underfull \hbox (badness 10000) in paragraph at lines 711--713 \T1/pcr/m/n/8 double []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data []_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dy n[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::likelihood [] -Underfull \hbox (badness 10000) in paragraph at lines 684--686 +Underfull \hbox (badness 10000) in paragraph at lines 722--724 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 684--686 +Underfull \hbox (badness 10000) in paragraph at lines 722--724 \T1/pcr/m/n/8 double []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data []_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dy n[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::likelihood [] -[186] -Underfull \hbox (badness 10000) in paragraph at lines 695--697 + +Underfull \hbox (badness 10000) in paragraph at lines 733--735 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 695--697 +Underfull \hbox (badness 10000) in paragraph at lines 733--735 \T1/pcr/m/n/8 double []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data []_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dy n[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::likelihood [] -Underfull \hbox (badness 10000) in paragraph at lines 706--708 +Underfull \hbox (badness 10000) in paragraph at lines 744--746 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] - -Underfull \hbox (badness 10000) in paragraph at lines 717--719 +[187] +Underfull \hbox (badness 10000) in paragraph at lines 755--757 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 717--719 +Underfull \hbox (badness 10000) in paragraph at lines 755--757 \T1/pcr/m/n/8 size[]_[]t []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] []Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::nrules [] -Underfull \hbox (badness 10000) in paragraph at lines 728--730 +Underfull \hbox (badness 10000) in paragraph at lines 766--768 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 728--730 +Underfull \hbox (badness 10000) in paragraph at lines 766--768 \T1/pcr/m/n/8 size[]_[]t []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] []Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::nrules[]_[]dyn [] -[187] -Underfull \hbox (badness 10000) in paragraph at lines 739--741 + +Underfull \hbox (badness 10000) in paragraph at lines 777--779 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 739--741 +Underfull \hbox (badness 10000) in paragraph at lines 777--779 \T1/pcr/m/n/8 size[]_[]t []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] []Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::nterms [] -Underfull \hbox (badness 10000) in paragraph at lines 750--752 +Underfull \hbox (badness 10000) in paragraph at lines 788--790 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 750--752 +Underfull \hbox (badness 10000) in paragraph at lines 788--790 []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][] Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][]Type $\OML/cm m/m/it/8 >$ \T1/pcr/m/n/8 & []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 750--752 +Underfull \hbox (badness 10000) in paragraph at lines 788--790 | \T1/pcr/m/n/8 const []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Da ta[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][] Dyn[]_[][]Type $\OML/cmm/m/it/8 >$ [] - -Underfull \hbox (badness 10000) in paragraph at lines 761--763 +[188] +Underfull \hbox (badness 10000) in paragraph at lines 799--801 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 776--778 +Underfull \hbox (badness 10000) in paragraph at lines 814--816 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 787--789 +Underfull \hbox (badness 10000) in paragraph at lines 825--827 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 787--789 +Underfull \hbox (badness 10000) in paragraph at lines 825--827 \T1/pcr/m/n/8 Array[]_[][]Type []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][] Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rul e[]_[][]Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::sample [] -[188] -Underfull \hbox (badness 10000) in paragraph at lines 798--800 + +Underfull \hbox (badness 10000) in paragraph at lines 836--838 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 798--800 +Underfull \hbox (badness 10000) in paragraph at lines 836--838 \T1/pcr/m/n/8 Array[]_[][]Type []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][] Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rul e[]_[][]Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::sample [] - -Underfull \hbox (badness 10000) in paragraph at lines 809--811 +[189] +Underfull \hbox (badness 10000) in paragraph at lines 847--849 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 809--811 +Underfull \hbox (badness 10000) in paragraph at lines 847--849 \T1/pcr/m/n/8 void []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::set[]_[]counters [] -Underfull \hbox (badness 10000) in paragraph at lines 820--822 +Underfull \hbox (badness 10000) in paragraph at lines 858--860 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 831--833 +Underfull \hbox (badness 10000) in paragraph at lines 869--871 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -[189] -Underfull \hbox (badness 10000) in paragraph at lines 842--844 + +Underfull \hbox (badness 10000) in paragraph at lines 880--882 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 842--844 +Underfull \hbox (badness 10000) in paragraph at lines 880--882 \T1/pcr/m/n/8 void []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::set[]_[]rules[]_[]dyn [] - -Underfull \hbox (badness 10000) in paragraph at lines 853--855 +[190] +Underfull \hbox (badness 10000) in paragraph at lines 891--893 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 864--866 +Underfull \hbox (badness 10000) in paragraph at lines 902--904 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -[190] -Underfull \hbox (badness 10000) in paragraph at lines 892--894 + +Overfull \vbox (21.45195pt too high) has occurred while \output is active [] + + +[191] +Underfull \hbox (badness 10000) in paragraph at lines 930--932 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Overfull \hbox (17.7145pt too wide) in paragraph at lines 892--894 +Overfull \hbox (17.7145pt too wide) in paragraph at lines 930--932 \T1/pcr/m/n/8 size[]_[]t []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] []Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::size [inline], [] -Underfull \hbox (badness 10000) in paragraph at lines 903--905 +Underfull \hbox (badness 10000) in paragraph at lines 941--943 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 903--905 +Underfull \hbox (badness 10000) in paragraph at lines 941--943 \T1/pcr/m/n/8 size[]_[]t []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] []Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::size[]_[]unique [] -Underfull \hbox (badness 10000) in paragraph at lines 914--916 +Underfull \hbox (badness 10000) in paragraph at lines 952--954 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 914--916 +Underfull \hbox (badness 10000) in paragraph at lines 952--954 \T1/pcr/m/n/8 void []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::store[]_[]psets [] -Underfull \hbox (badness 10000) in paragraph at lines 925--927 +Underfull \hbox (badness 10000) in paragraph at lines 963--965 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -Underfull \hbox (badness 10000) in paragraph at lines 925--927 +Underfull \hbox (badness 10000) in paragraph at lines 963--965 \T1/pcr/m/n/8 size[]_[]t []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] []Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::support[]_[] [] -Underfull \hbox (badness 10000) in paragraph at lines 936--938 +Underfull \hbox (badness 10000) in paragraph at lines 974--976 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 936--938 +Underfull \hbox (badness 10000) in paragraph at lines 974--976 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 double$\OML/cmm/m/i t/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Dat a[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][]Type [] -[191] -Underfull \hbox (badness 10000) in paragraph at lines 943--945 + +Underfull \hbox (badness 10000) in paragraph at lines 981--983 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 943--945 +Underfull \hbox (badness 10000) in paragraph at lines 981--983 \T1/pcr/m/n/8 void []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::update[]_[] [] - -Underfull \hbox (badness 10000) in paragraph at lines 961--963 +[192] +Underfull \hbox (badness 10000) in paragraph at lines 999--1001 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 961--963 +Underfull \hbox (badness 10000) in paragraph at lines 999--1001 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c mm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Typ e, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 972--974 +Underfull \hbox (badness 10000) in paragraph at lines 1010--1012 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 972--974 +Underfull \hbox (badness 10000) in paragraph at lines 1010--1012 []$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 Array[]_[][]Type,Data[]_[][]Counter[]_[][]Ty pe$\OML/cmm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[ ]_[][]Type, Data[]_[][]Rule[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 983--985 +Underfull \hbox (badness 10000) in paragraph at lines 1021--1023 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 983--985 +Underfull \hbox (badness 10000) in paragraph at lines 1021--1023 []$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 Array[]_[][]Type,Data[]_[][]Counter[]_[][]Ty pe$\OML/cmm/m/it/8 >$$\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, [] -Underfull \hbox (badness 10000) in paragraph at lines 994--996 +Underfull \hbox (badness 10000) in paragraph at lines 1032--1034 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 994--996 +Underfull \hbox (badness 10000) in paragraph at lines 1032--1034 \T1/pcr/m/n/8 bool []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::delete[]_[] [] -[192] -Underfull \hbox (badness 10000) in paragraph at lines 1005--1007 +[193] +Underfull \hbox (badness 10000) in paragraph at lines 1043--1045 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1005--1007 +Underfull \hbox (badness 10000) in paragraph at lines 1043--1045 \T1/pcr/m/n/8 bool []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::delete[]_[] [] -Underfull \hbox (badness 10000) in paragraph at lines 1016--1018 +Underfull \hbox (badness 10000) in paragraph at lines 1054--1056 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1016--1018 +Underfull \hbox (badness 10000) in paragraph at lines 1054--1056 \T1/pcr/m/n/8 bool []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::delete[]_[]rules [] -Underfull \hbox (badness 10000) in paragraph at lines 1027--1029 +Underfull \hbox (badness 10000) in paragraph at lines 1065--1067 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1027--1029 +Underfull \hbox (badness 10000) in paragraph at lines 1065--1067 \T1/pcr/m/n/8 bool []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::delete[]_[] [] -Underfull \hbox (badness 10000) in paragraph at lines 1038--1040 +Underfull \hbox (badness 10000) in paragraph at lines 1076--1078 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1038--1040 +Underfull \hbox (badness 10000) in paragraph at lines 1076--1078 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 bool $\OML/cmm/m/i t/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Dat a[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][]Type [] -[193] -Underfull \hbox (badness 10000) in paragraph at lines 1049--1051 +[194] +Underfull \hbox (badness 10000) in paragraph at lines 1087--1089 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1049--1051 +Underfull \hbox (badness 10000) in paragraph at lines 1087--1089 []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 double, size[]_[]t $\OML/cmm/m/it/8 >$ []$< $ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rul e[]_[][]Type, Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1064--1066 +Underfull \hbox (badness 10000) in paragraph at lines 1102--1104 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1064--1066 +Underfull \hbox (badness 10000) in paragraph at lines 1102--1104 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m /it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, D ata[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1075--1077 +Underfull \hbox (badness 10000) in paragraph at lines 1113--1115 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1075--1077 +Underfull \hbox (badness 10000) in paragraph at lines 1113--1115 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$\T1/pcr/m/n/8 double$\OML/cmm/m/it/8 >$ $>$ []$<$ \T1/pcr/m/n/8 A rray[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, [] -Underfull \hbox (badness 10000) in paragraph at lines 1090--1092 +Underfull \hbox (badness 10000) in paragraph at lines 1128--1130 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1090--1092 +Underfull \hbox (badness 10000) in paragraph at lines 1128--1130 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type $\OML/cmm/m/it/8 >$ $>$ []$<$ \T1 /pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[ @@ -2982,215 +3020,215 @@ Underfull \hbox (badness 10000) in paragraph at lines 1090--1092 [] -Underfull \hbox (badness 10000) in paragraph at lines 1105--1107 +Underfull \hbox (badness 10000) in paragraph at lines 1143--1145 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1105--1107 +Underfull \hbox (badness 10000) in paragraph at lines 1143--1145 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$\T1/pcr/m/n/8 double$\OML/cmm/m/it/8 >$ $>$ []$<$ \T1/pcr/m/n/8 A rray[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, [] -[194] -Underfull \hbox (badness 10000) in paragraph at lines 1120--1122 +[195] +Underfull \hbox (badness 10000) in paragraph at lines 1158--1160 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1120--1122 +Underfull \hbox (badness 10000) in paragraph at lines 1158--1160 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$\T1/pcr/m/n/8 double$\OML/cmm/m/it/8 >$ $>$ []$<$ \T1/pcr/m/n/8 A rray[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, [] -Underfull \hbox (badness 10000) in paragraph at lines 1135--1137 +Underfull \hbox (badness 10000) in paragraph at lines 1173--1175 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1135--1137 +Underfull \hbox (badness 10000) in paragraph at lines 1173--1175 \T1/pcr/m/n/8 std[]::mt19937$\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr /m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]T ype, Data[]_[][]Rule[]_[][]Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[] [] -Underfull \hbox (badness 10000) in paragraph at lines 1146--1148 +Underfull \hbox (badness 10000) in paragraph at lines 1184--1186 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1157--1159 +Underfull \hbox (badness 10000) in paragraph at lines 1195--1197 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1157--1159 +Underfull \hbox (badness 10000) in paragraph at lines 1195--1197 []$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 Array[]_[][]Type,Data[]_[][]Rule[]_[][]Dyn[] _[][]Type$\OML/cmm/m/it/8 >$$\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr /m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]T ype, [] -[195] -Underfull \hbox (badness 10000) in paragraph at lines 1168--1170 +[196] +Underfull \hbox (badness 10000) in paragraph at lines 1206--1208 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1168--1170 +Underfull \hbox (badness 10000) in paragraph at lines 1206--1208 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m /it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, D ata[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1183--1185 +Underfull \hbox (badness 10000) in paragraph at lines 1221--1223 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1183--1185 +Underfull \hbox (badness 10000) in paragraph at lines 1221--1223 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c mm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Typ e, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1198--1200 +Underfull \hbox (badness 10000) in paragraph at lines 1236--1238 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1198--1200 +Underfull \hbox (badness 10000) in paragraph at lines 1236--1238 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c mm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Typ e, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1213--1215 +Underfull \hbox (badness 10000) in paragraph at lines 1251--1253 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1213--1215 +Underfull \hbox (badness 10000) in paragraph at lines 1251--1253 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c mm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Typ e, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -[196] -Underfull \hbox (badness 10000) in paragraph at lines 1228--1230 +[197] +Underfull \hbox (badness 10000) in paragraph at lines 1266--1268 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1228--1230 +Underfull \hbox (badness 10000) in paragraph at lines 1266--1268 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::vector$\OML /cmm/m/it/8 <$ \T1/pcr/m/n/8 double $\OML/cmm/m/it/8 >$ $>$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, [] -Underfull \hbox (badness 10000) in paragraph at lines 1243--1245 +Underfull \hbox (badness 10000) in paragraph at lines 1281--1283 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1243--1245 +Underfull \hbox (badness 10000) in paragraph at lines 1281--1283 []$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 Array[]_[][]Type,Data[]_[][]Counter[]_[][]Ty pe,Data[]_[][]Rule[]_[][]Type,Data[]_[][]Rule[]_[][]Dyn[]_[][]Type$\OML/cmm/m/i t/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, [] -Underfull \hbox (badness 10000) in paragraph at lines 1254--1256 +Underfull \hbox (badness 10000) in paragraph at lines 1292--1294 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1254--1256 +Underfull \hbox (badness 10000) in paragraph at lines 1292--1294 \T1/pcr/m/n/8 std[]::function$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 std[]::vector$\OM L/cmm/m/it/8 <$\T1/pcr/m/n/8 double$\OML/cmm/m/it/8 >$\T1/pcr/m/n/8 double $\OM S/cmsy/m/n/8 ^^C$\T1/pcr/m/n/8 , size[]_[]t k)$\OML/cmm/m/it/8 >$ []$<$ \T1/pcr /m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, [] -[197] -Underfull \hbox (badness 10000) detected at line 1269 +[198] +Underfull \hbox (badness 10000) detected at line 1307 [][][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1280--1282 +Underfull \hbox (badness 10000) in paragraph at lines 1318--1320 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1280--1282 +Underfull \hbox (badness 10000) in paragraph at lines 1318--1320 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 std[]::string $\OM L/cmm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][] Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1291--1293 +Underfull \hbox (badness 10000) in paragraph at lines 1329--1331 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e = BArray$\OML/cmm/m/it/8 <$$>$\T1/pcr/m/n/8 , typename Data[]_[][]Counter[]_[ ][]Type = bool, typename Data[]_[][] [] -Underfull \hbox (badness 10000) in paragraph at lines 1291--1293 +Underfull \hbox (badness 10000) in paragraph at lines 1329--1331 \T1/pcr/m/n/8 bool []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::with[]_[]pset = [] -) (./class_net_counter_data.tex [198] [199]) (./class_network_data.tex [200] -[201]) (./class_node.tex <./class_node__coll__graph.pdf +) (./class_net_counter_data.tex [199] [200]) (./class_network_data.tex [201] +[202]) (./class_node.tex <./class_node__coll__graph.pdf pdfTeX warning: pdflatex (file ./class_node__coll__graph.pdf): PDF inclusion: m ultiple pdfs with page group included in a single page > - + File: class_node__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_node__coll__graph.pdf used on input line 19. (pdftex.def) Requested size: 168.0pt x 100.00255pt. - [202] [203] [204] [205] [206]) (./class_node_data.tex [207] [208]) -(./class_phylo_counter_data.tex [209] [210] [211]) -(./class_phylo_rule_dyn_data.tex [212] [213]) (./class_power_set.tex + [203] [204] [205] [206] [207]) (./class_node_data.tex [208] [209]) +(./class_phylo_counter_data.tex [210] [211] [212]) +(./class_phylo_rule_dyn_data.tex [213] [214]) (./class_power_set.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. @@ -3212,17 +3250,17 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): pdfTeX warning: pdflatex (file ./class_power_set__coll__graph.pdf): PDF inclusi on: multiple pdfs with page group included in a single page > - + File: class_power_set__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: class_power_set__coll__graph.pdf used on input line 1 9. (pdftex.def) Requested size: 202.0pt x 178.00456pt. - [214] + [215] Overfull \vbox (5.8758pt too high) has occurred while \output is active [] -[215] [216] +[216] [217] Underfull \hbox (badness 10000) in paragraph at lines 229--231 \T1/pcr/m/n/8 const std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][] Type $\OML/cmm/m/it/8 >$$\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n @@ -3230,7 +3268,7 @@ Type $\OML/cmm/m/it/8 >$$\OMS/cmsy/m/n/8 ^^C$ []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n n/8 ::get[]_[]data[]_[]ptr ( ) [] -[217] [218] [219]) (./class_progress.tex [220] [221]) (./class_rule.tex +[218] [219] [220]) (./class_progress.tex [221] [222]) (./class_rule.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. @@ -3247,7 +3285,7 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. -[222] [223] [224]) (./class_rules.tex +[223] [224] [225]) (./class_rules.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. @@ -3264,7 +3302,7 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. -[225] [226] +[226] [227] Underfull \hbox (badness 10000) in paragraph at lines 134--136 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ []$<$\T1/pcr/m/n/8 Array[]_[][]T ype,Data[]_[][]Type$\OML/cmm/m/it/8 >$ $>$[]\T1/pcr/m/n/8 ::iterator []$\OML/cm @@ -3280,12 +3318,12 @@ m/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Type $\OML/cmm/m/it/8 >$ []\T1/pcr/m/n/8 ::end ( ) [] -[227] +[228] Underfull \hbox (badness 10000) detected at line 194 [][][] [] -[228] +[229] Underfull \hbox (badness 10000) detected at line 221 [][][] [] @@ -3307,17 +3345,17 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. -[229] +[230] Overfull \hbox (3.9776pt too wide) in paragraph at lines 1--1 []\T1/phv/m/sl/10 Array[] [] -[230] [231] +[231] [232] Overfull \hbox (3.9776pt too wide) in paragraph at lines 1--1 []\T1/phv/m/sl/10 Array[] [] -[232]) (./class_support.tex +[233]) (./class_support.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. @@ -3342,7 +3380,7 @@ y[]_[][]Type $\OML/cmm/m/it/10 >$ $\OMS/cmsy/m/n/10 ^^C$\T1/phv/m/n/10 array[]_ cmm/m/it/10 >$ $\OMS/cmsy/m/n/10 ^^C$\T1/phv/m/n/10 stats[]_[] [] -[233] +[234] Overfull \hbox (3.9776pt too wide) in paragraph at lines 1--1 []\T1/phv/m/n/10 Array[] [] @@ -3357,7 +3395,7 @@ Overfull \hbox (3.9776pt too wide) in paragraph at lines 3--3 []\T1/phv/m/n/10 counters[] [] -[234] [235] +[235] [236] Underfull \hbox (badness 10000) in paragraph at lines 182--184 []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][] Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][]Type $\OML/cm @@ -3399,7 +3437,7 @@ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -[236] +[237] Underfull \hbox (badness 10000) in paragraph at lines 240--242 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ @@ -3434,7 +3472,7 @@ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -[237] +[238] Underfull \hbox (badness 10000) in paragraph at lines 286--288 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ @@ -3505,7 +3543,7 @@ Underfull \hbox (badness 10000) in paragraph at lines 338--340 ]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][] [] -[238] +[239] Underfull \hbox (badness 10000) in paragraph at lines 349--351 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ @@ -3561,7 +3599,7 @@ _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::print [] -[239] +[240] Underfull \hbox (badness 10000) in paragraph at lines 401--403 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ @@ -3610,7 +3648,7 @@ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ e , typename [] -[240] +[241] Underfull \hbox (badness 10000) in paragraph at lines 445--447 \T1/pcr/m/n/8 template$\OML/cmm/m/it/8 <$\T1/pcr/m/n/8 typename Array[]_[][]Typ e , typename Data[]_[][]Counter[]_[][]Type , typename Data[]_[][]Rule[]_[][]Typ @@ -3645,7 +3683,7 @@ Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] []Dyn[]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::coordiantes[] [] -[241] +[242] Underfull \hbox (badness 10000) in paragraph at lines 492--494 \T1/pcr/m/n/8 std[]::vector$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 size[]_[]t $\OML/c mm/m/it/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Typ @@ -3673,7 +3711,7 @@ _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ ]_[][]Type $\OML/cmm/m/it/8 >$[]\T1/pcr/m/n/8 ::delete[]_[] [] -[242] +[243] Underfull \hbox (badness 10000) in paragraph at lines 536--538 \T1/pcr/m/n/8 bool []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[] _[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[ @@ -3701,7 +3739,7 @@ t/8 >$ []$<$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Dat a[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[][]Dyn[]_[][] [] -[243] +[244] Underfull \hbox (badness 10000) in paragraph at lines 591--593 \T1/pcr/m/n/8 size[]_[]t []$\OML/cmm/m/it/8 <$ \T1/pcr/m/n/8 Array[]_[][]Type, Data[]_[][]Counter[]_[][]Type, Data[]_[][]Rule[]_[][]Type, Data[]_[][]Rule[]_[] @@ -3732,16 +3770,14 @@ Package hyperref Warning: Token not allowed in a PDF string (Unicode): Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `math shift' on input line 1. -[244]) [245] [246 - -] +[245]) [246] Chapter 9. (./barray-bones_8hpp.tex <./barray-bones_8hpp__dep__incl.pdf pdfTeX warning: pdflatex (file ./barray-bones_8hpp__dep__incl.pdf): PDF inclusi on: multiple pdfs with page group included in a single page > - + File: barray-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barray-bones_8hpp__dep__incl.pdf used on input line 8 @@ -3753,20 +3789,22 @@ Package pdftex.def Info: barray-bones_8hpp__dep__incl.pdf used on input line 8 pdfTeX warning: pdflatex (file ./barray-meat-operators_8hpp__dep__incl.pdf): PD F inclusion: multiple pdfs with page group included in a single page > - File: barray-meat-operators_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barray-meat-operators_8hpp__dep__incl.pdf used on inp ut line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. - [247] [248] [249] [250]) (./barray-meat_8hpp.tex <./barray-meat_8hpp__dep__inc -l.pdf + [247 + +] [248] [249] [250]) (./barray-meat_8hpp.tex <./barray-meat_8hpp__dep__incl.pdf + pdfTeX warning: pdflatex (file ./barray-meat_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: barray-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barray-meat_8hpp__dep__incl.pdf used on input line 8. @@ -3774,7 +3812,7 @@ Package pdftex.def Info: barray-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. [251] [252]) (./barraycell-bones_8hpp.tex <./barraycell-bones_8hpp__dep__incl. pdf> - + File: barraycell-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraycell-bones_8hpp__dep__incl.pdf used on input li @@ -3785,14 +3823,14 @@ ne 8. pdfTeX warning: pdflatex (file ./barraycell-meat_8hpp__dep__incl.pdf): PDF incl usion: multiple pdfs with page group included in a single page > - + File: barraycell-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraycell-meat_8hpp__dep__incl.pdf used on input lin e 8. (pdftex.def) Requested size: 196.0pt x 166.99916pt. ) (./barraydense-bones_8hpp.tex [253] <./barraydense-bones_8hpp__dep__incl.pdf> - + File: barraydense-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydense-bones_8hpp__dep__incl.pdf used on input l @@ -3804,7 +3842,7 @@ p__incl.pdf pdfTeX warning: pdflatex (file ./barraydense-meat-operators_8hpp__dep__incl.pdf ): PDF inclusion: multiple pdfs with page group included in a single page > - File: barraydense-meat-operators_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -3817,7 +3855,7 @@ _incl.pdf pdfTeX warning: pdflatex (file ./barraydense-meat_8hpp__dep__incl.pdf): PDF inc lusion: multiple pdfs with page group included in a single page > - + File: barraydense-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydense-meat_8hpp__dep__incl.pdf used on input li @@ -3825,7 +3863,7 @@ ne 8. (pdftex.def) Requested size: 207.0pt x 167.00684pt. [257] [258]) (./barraydensecell-bones_8hpp.tex <./barraydensecell-bones_8hpp__ dep__incl.pdf> - + File: barraydensecell-bones_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -3834,7 +3872,7 @@ ut line 8. (pdftex.def) Requested size: 222.0pt x 167.00172pt. [259]) (./barraydensecell-meat_8hpp.tex <./barraydensecell-meat_8hpp__dep__inc l.pdf> - + File: barraydensecell-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydensecell-meat_8hpp__dep__incl.pdf used on inpu @@ -3845,7 +3883,7 @@ t line 8. pdfTeX warning: pdflatex (file ./barraydensecol-bones_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: barraydensecol-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barraydensecol-bones_8hpp__dep__incl.pdf used on inpu @@ -3853,7 +3891,7 @@ t line 8. (pdftex.def) Requested size: 220.0pt x 167.00684pt. [260] [261]) (./barraydenserow-bones_8hpp.tex <./barraydenserow-bones_8hpp__de p__incl.pdf> - + File: barraydenserow-bones_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -3867,7 +3905,7 @@ t line 8. pdfTeX warning: pdflatex (file ./barry-configuration_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: barry-configuration_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry-configuration_8hpp__dep__incl.pdf used on input @@ -3882,7 +3920,7 @@ m/it/8 >$[]\T1/pcr/m/n/8 ::max() [] ) (./barry-debug_8hpp.tex <./barry-debug_8hpp__dep__incl.pdf> - + File: barry-debug_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry-debug_8hpp__dep__incl.pdf used on input line 8. @@ -3894,14 +3932,14 @@ Package pdftex.def Info: barry-debug_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./barry-macros_8hpp__dep__incl.pdf): PDF inclusi on: multiple pdfs with page group included in a single page > - + File: barry-macros_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry-macros_8hpp__dep__incl.pdf used on input line 8 . (pdftex.def) Requested size: 193.0pt x 167.00172pt. [268] [269]) (./barry_8hpp.tex <./barry_8hpp__incl.pdf> - + File: barry_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: barry_8hpp__incl.pdf used on input line 56. @@ -3912,7 +3950,7 @@ Package pdftex.def Info: barry_8hpp__incl.pdf used on input line 56. pdfTeX warning: pdflatex (file ./cell-bones_8hpp__dep__incl.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: cell-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: cell-bones_8hpp__dep__incl.pdf used on input line 8. @@ -3922,14 +3960,14 @@ Package pdftex.def Info: cell-bones_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./cell-meat_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: cell-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: cell-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. ) (./col-bones_8hpp.tex [273]) (./counters-bones_8hpp.tex <./counters-bones_8hp p__dep__incl.pdf> - + File: counters-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: counters-bones_8hpp__dep__incl.pdf used on input line @@ -3940,7 +3978,7 @@ Package pdftex.def Info: counters-bones_8hpp__dep__incl.pdf used on input line pdfTeX warning: pdflatex (file ./counters-meat_8hpp__dep__incl.pdf): PDF inclus ion: multiple pdfs with page group included in a single page > - + File: counters-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: counters-meat_8hpp__dep__incl.pdf used on input line @@ -3977,7 +4015,7 @@ pe,Data[]_[][]Type$\OML/cmm/m/it/8 >$ []$<$\T1/pcr/m/n/8 Array[]_[][]Type,Data[ pdfTeX warning: pdflatex (file ./network-css_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: network-css_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: network-css_8hpp__dep__incl.pdf used on input line 8. @@ -3989,7 +4027,7 @@ k_8hpp__incl.pdf pdfTeX warning: pdflatex (file ./network_8hpp__incl.pdf): PDF inclusion: multip le pdfs with page group included in a single page > - + File: network_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: network_8hpp__incl.pdf used on input line 9. @@ -3999,7 +4037,7 @@ Package pdftex.def Info: network_8hpp__incl.pdf used on input line 9. pdfTeX warning: pdflatex (file ./network_8hpp__dep__incl.pdf): PDF inclusion: m ultiple pdfs with page group included in a single page > - + File: network_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: network_8hpp__dep__incl.pdf used on input line 17. @@ -4010,7 +4048,7 @@ Package pdftex.def Info: network_8hpp__dep__incl.pdf used on input line 17. pdfTeX warning: pdflatex (file ./freqtable_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: freqtable_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: freqtable_8hpp__dep__incl.pdf used on input line 8. @@ -4020,14 +4058,14 @@ Package pdftex.def Info: freqtable_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./model-bones_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: model-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: model-bones_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. [302]) (./model-meat_8hpp.tex <./model-meat_8hpp__dep__incl.pdf> - + File: model-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: model-meat_8hpp__dep__incl.pdf used on input line 8. @@ -4040,14 +4078,14 @@ e $\OML/cmm/m/it/10 >$ \T1/phv/m/n/10 ¶ms, const dou-ble [] [303]) (./defm_8hpp.tex <./defm_8hpp__incl.pdf> - + File: defm_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm_8hpp__incl.pdf used on input line 14. (pdftex.def) Requested size: 350.0pt x 114.94736pt. [304]) (./defm_2counters_8hpp.tex <./defm_2counters_8hpp__incl.pdf> - + File: defm_2counters_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm_2counters_8hpp__incl.pdf used on input line 9. @@ -4057,7 +4095,7 @@ Package pdftex.def Info: defm_2counters_8hpp__incl.pdf used on input line 9. pdfTeX warning: pdflatex (file ./defm_2counters_8hpp__dep__incl.pdf): PDF inclu sion: multiple pdfs with page group included in a single page > - + File: defm_2counters_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm_2counters_8hpp__dep__incl.pdf used on input line @@ -4075,7 +4113,7 @@ cl.pdf pdfTeX warning: pdflatex (file ./geese_2counters_8hpp__dep__incl.pdf): PDF incl usion: multiple pdfs with page group included in a single page > - + File: geese_2counters_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese_2counters_8hpp__dep__incl.pdf used on input lin @@ -4173,7 +4211,7 @@ t nfunA, size[]_[]t nfunB, size[]_[] pdfTeX warning: pdflatex (file ./defm-bones_8hpp__dep__incl.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: defm-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm-bones_8hpp__dep__incl.pdf used on input line 8. @@ -4183,13 +4221,13 @@ Package pdftex.def Info: defm-bones_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./defm-meat_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - + File: defm-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 189.0pt x 178.00456pt. [310] [311]) (./defm-types_8hpp.tex <./defm-types_8hpp__dep__incl.pdf> - + File: defm-types_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: defm-types_8hpp__dep__incl.pdf used on input line 8. @@ -4207,14 +4245,14 @@ Underfull \hbox (badness 4531) in paragraph at lines 38--40 [] [312]) (./formula_8hpp.tex <./formula_8hpp__dep__incl.pdf> - + File: formula_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: formula_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 186.0pt x 245.01004pt. [313]) (./geese_8hpp.tex <./geese_8hpp__incl.pdf> - + File: geese_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese_8hpp__incl.pdf used on input line 22. @@ -4224,7 +4262,7 @@ Package pdftex.def Info: geese_8hpp__incl.pdf used on input line 22. pdfTeX warning: pdflatex (file ./flock-bones_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: flock-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: flock-bones_8hpp__dep__incl.pdf used on input line 8. @@ -4235,13 +4273,13 @@ Package pdftex.def Info: flock-bones_8hpp__dep__incl.pdf used on input line 8. pdfTeX warning: pdflatex (file ./flock-meat_8hpp__dep__incl.pdf): PDF inclusion : multiple pdfs with page group included in a single page > - + File: flock-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: flock-meat_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 192.0pt x 177.99911pt. ) (./geese-bones_8hpp.tex [315] <./geese-bones_8hpp__dep__incl.pdf> - + File: geese-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-bones_8hpp__dep__incl.pdf used on input line 8. @@ -4254,7 +4292,7 @@ __incl.pdf pdfTeX warning: pdflatex (file ./geese-meat-constructors_8hpp__dep__incl.pdf): PDF inclusion: multiple pdfs with page group included in a single page > - File: geese-meat-constructors_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -4266,14 +4304,14 @@ nput line 8. pdfTeX warning: pdflatex (file ./geese-meat-likelihood_8hpp__incl.pdf): PDF inc lusion: multiple pdfs with page group included in a single page > - + File: geese-meat-likelihood_8hpp__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-meat-likelihood_8hpp__incl.pdf used on input li ne 9. (pdftex.def) Requested size: 241.0pt x 167.00684pt. [318] <./geese-meat-likelihood_8hpp__dep__incl.pdf> - + File: geese-meat-likelihood_8hpp__dep__incl.pdf Graphic file (type pdf) @@ -4283,7 +4321,7 @@ ut line 17. [319]) (./geese-meat-likelihood__exhaust_8hpp.tex <./geese-meat-likelihood__exhaust_8h pp__dep__incl.pdf> - File: geese-meat-likelihood__exhaust_8hpp__dep__incl.pdf Graphic file (type pdf ) @@ -4296,7 +4334,7 @@ ed on input line 8. pdfTeX warning: pdflatex (file ./geese-meat-predict_8hpp__dep__incl.pdf): PDF i nclusion: multiple pdfs with page group included in a single page > - + File: geese-meat-predict_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-meat-predict_8hpp__dep__incl.pdf used on input @@ -4304,7 +4342,7 @@ line 8. 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(pdftex.def) Requested size: 198.0pt x 178.00456pt. ) (./geese-node-bones_8hpp.tex [322] <./geese-node-bones_8hpp__dep__incl.pdf> - + File: geese-node-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-node-bones_8hpp__dep__incl.pdf used on input li @@ -4354,7 +4392,7 @@ ne 8. pdfTeX warning: pdflatex (file ./geese-types_8hpp__dep__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page > - + File: geese-types_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: geese-types_8hpp__dep__incl.pdf used on input line 8. @@ -4377,7 +4415,7 @@ Overfull \hbox (23.5786pt too wide) in paragraph at lines 184--185 pdfTeX warning: pdflatex (file ./powerset-bones_8hpp__dep__incl.pdf): PDF inclu sion: multiple pdfs with page group included in a single page > - + File: powerset-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: powerset-bones_8hpp__dep__incl.pdf used on input line @@ -4388,21 +4426,21 @@ Package pdftex.def Info: powerset-bones_8hpp__dep__incl.pdf used on input line pdfTeX warning: pdflatex (file ./powerset-meat_8hpp__dep__incl.pdf): PDF inclus ion: multiple pdfs with page group included in a single page > - + File: powerset-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: powerset-meat_8hpp__dep__incl.pdf used on input line 8. 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(pdftex.def) Requested size: 193.0pt x 167.00172pt. ) (./statscounter-bones_8hpp.tex [329] <./statscounter-bones_8hpp__dep__incl.pd f> - + File: statscounter-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: statscounter-bones_8hpp__dep__incl.pdf used on input @@ -4432,7 +4470,7 @@ line 8. pdfTeX warning: pdflatex (file ./statscounter-meat_8hpp__dep__incl.pdf): PDF in clusion: multiple pdfs with page group included in a single page > - + File: statscounter-meat_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: statscounter-meat_8hpp__dep__incl.pdf used on input l @@ -4449,14 +4487,14 @@ _dep__incl.pdf pdfTeX warning: pdflatex (file ./support-bones_8hpp__dep__incl.pdf): PDF inclus ion: multiple pdfs with page group included in a single page > - + File: support-bones_8hpp__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: support-bones_8hpp__dep__incl.pdf used on input line 8. (pdftex.def) Requested size: 193.0pt x 167.00172pt. 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>$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2086--2088 +Underfull \hbox (badness 2088) in paragraph at lines 2094--2096 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2094--2096 +Underfull \hbox (badness 2088) in paragraph at lines 2102--2104 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2101--2103 +Underfull \hbox (badness 2088) in paragraph at lines 2109--2111 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2108--2110 +Underfull \hbox (badness 2088) in paragraph at lines 2116--2118 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2115--2117 +Underfull \hbox (badness 2088) in paragraph at lines 2123--2125 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 1142) in paragraph at lines 2138--2140 +Underfull \hbox (badness 1142) in paragraph at lines 2146--2148 []| \T1/phv/m/n/10 BArrayDenseRow_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell _Type, Data_Type [] [362] -Underfull \hbox (badness 10000) in paragraph at lines 2192--2194 +Underfull \hbox (badness 10000) in paragraph at lines 2200--2202 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2192--2194 +Underfull \hbox (badness 3568) in paragraph at lines 2200--2202 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 2088) in paragraph at lines 2209--2211 +Underfull \hbox (badness 2088) in paragraph at lines 2217--2219 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2227--2229 +Underfull \hbox (badness 10000) in paragraph at lines 2235--2237 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2227--2229 +Underfull \hbox (badness 3568) in paragraph at lines 2235--2237 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -[363] -Underfull \hbox (badness 10000) in paragraph at lines 2411--2413 +[363] [364] +Underfull \hbox (badness 10000) in paragraph at lines 2419--2421 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2411--2413 +Underfull \hbox (badness 3568) in paragraph at lines 2419--2421 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2414--2416 +Underfull \hbox (badness 10000) in paragraph at lines 2422--2424 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2414--2416 +Underfull \hbox (badness 3568) in paragraph at lines 2422--2424 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -[364] -Underfull \hbox (badness 10000) in paragraph at lines 2423--2425 + +Underfull \hbox (badness 10000) in paragraph at lines 2431--2433 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2423--2425 +Underfull \hbox (badness 3568) in paragraph at lines 2431--2433 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2437--2439 +Underfull \hbox (badness 10000) in paragraph at lines 2445--2447 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2437--2439 +Underfull \hbox (badness 3568) in paragraph at lines 2445--2447 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2444--2446 +Underfull \hbox (badness 10000) in paragraph at lines 2452--2454 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2444--2446 +Underfull \hbox (badness 3568) in paragraph at lines 2452--2454 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2447--2449 +Underfull \hbox (badness 10000) in paragraph at lines 2455--2457 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2447--2449 +Underfull \hbox (badness 3568) in paragraph at lines 2455--2457 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2459--2461 +Underfull \hbox (badness 10000) in paragraph at lines 2467--2469 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2459--2461 +Underfull \hbox (badness 3568) in paragraph at lines 2467--2469 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2475--2477 +Underfull \hbox (badness 10000) in paragraph at lines 2483--2485 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2475--2477 +Underfull \hbox (badness 3568) in paragraph at lines 2483--2485 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] - -Underfull \hbox (badness 10000) in paragraph at lines 2529--2531 +[365] +Underfull \hbox (badness 10000) in paragraph at lines 2537--2539 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2529--2531 +Underfull \hbox (badness 3568) in paragraph at lines 2537--2539 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -[365] -Underfull \hbox (badness 10000) in paragraph at lines 2553--2555 + +Underfull \hbox (badness 10000) in paragraph at lines 2561--2563 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2553--2555 +Underfull \hbox (badness 3568) in paragraph at lines 2561--2563 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2563--2565 +Underfull \hbox (badness 10000) in paragraph at lines 2571--2573 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2563--2565 +Underfull \hbox (badness 3568) in paragraph at lines 2571--2573 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2568--2570 +Underfull \hbox (badness 10000) in paragraph at lines 2576--2578 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2568--2570 +Underfull \hbox (badness 3568) in paragraph at lines 2576--2578 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2572--2574 +Underfull \hbox (badness 10000) in paragraph at lines 2580--2582 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2572--2574 +Underfull \hbox (badness 3568) in paragraph at lines 2580--2582 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2583--2585 +Underfull \hbox (badness 10000) in paragraph at lines 2591--2593 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2583--2585 +Underfull \hbox (badness 3568) in paragraph at lines 2591--2593 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2586--2588 +Underfull \hbox (badness 10000) in paragraph at lines 2594--2596 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2586--2588 +Underfull \hbox (badness 3568) in paragraph at lines 2594--2596 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2588--2590 +Underfull \hbox (badness 10000) in paragraph at lines 2596--2598 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2588--2590 +Underfull \hbox (badness 3568) in paragraph at lines 2596--2598 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2591--2593 +Underfull \hbox (badness 10000) in paragraph at lines 2599--2601 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2591--2593 +Underfull \hbox (badness 3568) in paragraph at lines 2599--2601 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2593--2595 +Underfull \hbox (badness 10000) in paragraph at lines 2601--2603 []| \T1/phv/m/n/10 Support$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data _Counter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2593--2595 +Underfull \hbox (badness 3568) in paragraph at lines 2601--2603 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2598--2600 +Underfull \hbox (badness 10000) in paragraph at lines 2606--2608 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2598--2600 +Underfull \hbox (badness 3568) in paragraph at lines 2606--2608 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2601--2603 +Underfull \hbox (badness 10000) in paragraph at lines 2609--2611 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2601--2603 +Underfull \hbox (badness 3568) in paragraph at lines 2609--2611 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 1142) in paragraph at lines 2615--2617 +Underfull \hbox (badness 1142) in paragraph at lines 2623--2625 []| \T1/phv/m/n/10 BArrayDenseRow_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell _Type, Data_Type [] -Underfull \hbox (badness 2088) in paragraph at lines 2619--2621 +Underfull \hbox (badness 2088) in paragraph at lines 2627--2629 []| \T1/phv/m/n/10 BArrayVector_const$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Cell_T ype, Data_Type $\OML/cmm/m/it/10 >$\T1/phv/m/n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2623--2625 +Underfull \hbox (badness 10000) in paragraph at lines 2631--2633 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2623--2625 +Underfull \hbox (badness 3568) in paragraph at lines 2631--2633 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2632--2634 +Underfull \hbox (badness 10000) in paragraph at lines 2640--2642 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2632--2634 +Underfull \hbox (badness 3568) in paragraph at lines 2640--2642 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] - -Underfull \hbox (badness 10000) in paragraph at lines 2642--2644 +[366] +Underfull \hbox (badness 10000) in paragraph at lines 2650--2652 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2642--2644 +Underfull \hbox (badness 3568) in paragraph at lines 2650--2652 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2645--2647 +Underfull \hbox (badness 10000) in paragraph at lines 2653--2655 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2645--2647 +Underfull \hbox (badness 3568) in paragraph at lines 2653--2655 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -[366] -Underfull \hbox (badness 10000) in paragraph at lines 2648--2650 + +Underfull \hbox (badness 10000) in paragraph at lines 2656--2658 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2648--2650 +Underfull \hbox (badness 3568) in paragraph at lines 2656--2658 \T1/phv/m/n/10 Data_Rule_Type, Data_Rule_Dyn_Type $\OML/cmm/m/it/10 >$\T1/phv/m /n/10 , [] -Underfull \hbox (badness 10000) in paragraph at lines 2651--2653 +Underfull \hbox (badness 10000) in paragraph at lines 2659--2661 []| \T1/phv/m/n/10 Model$\OML/cmm/m/it/10 <$ \T1/phv/m/n/10 Ar-ray_Type, Data_C ounter_Type, [] -Underfull \hbox (badness 3568) in paragraph at lines 2651--2653 +Underfull \hbox (badness 3568) in paragraph at lines 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100644 --- a/latex/refman.toc +++ b/latex/refman.toc @@ -725,7 +725,7 @@ \contentsline {subsection}{\numberline {8.29.1}Detailed Description}{179}{subsection.8.29.1}% \contentsline {subsection}{\numberline {8.29.2}Constructor \& Destructor Documentation}{179}{subsection.8.29.2}% \contentsline {subsubsection}{\numberline {8.29.2.1}Model()\hspace {0.1cm}{\footnotesize \ttfamily [1/3]}}{179}{subsubsection.8.29.2.1}% -\contentsline {subsubsection}{\numberline {8.29.2.2}Model()\hspace {0.1cm}{\footnotesize \ttfamily [2/3]}}{179}{subsubsection.8.29.2.2}% +\contentsline {subsubsection}{\numberline {8.29.2.2}Model()\hspace {0.1cm}{\footnotesize \ttfamily [2/3]}}{180}{subsubsection.8.29.2.2}% \contentsline {subsubsection}{\numberline {8.29.2.3}Model()\hspace {0.1cm}{\footnotesize \ttfamily [3/3]}}{180}{subsubsection.8.29.2.3}% \contentsline {subsubsection}{\numberline {8.29.2.4}$\sim $Model()}{180}{subsubsection.8.29.2.4}% \contentsline {subsection}{\numberline {8.29.3}Member Function Documentation}{180}{subsection.8.29.3}% @@ -734,7 +734,7 @@ \contentsline {subsubsection}{\numberline {8.29.3.3}add\_counter()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{181}{subsubsection.8.29.3.3}% \contentsline {subsubsection}{\numberline {8.29.3.4}add\_hasher()}{181}{subsubsection.8.29.3.4}% \contentsline {subsubsection}{\numberline {8.29.3.5}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{181}{subsubsection.8.29.3.5}% -\contentsline {subsubsection}{\numberline {8.29.3.6}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{181}{subsubsection.8.29.3.6}% +\contentsline {subsubsection}{\numberline {8.29.3.6}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{182}{subsubsection.8.29.3.6}% \contentsline {subsubsection}{\numberline {8.29.3.7}add\_rule\_dyn()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{182}{subsubsection.8.29.3.7}% \contentsline {subsubsection}{\numberline {8.29.3.8}add\_rule\_dyn()\hspace {0.1cm}{\footnotesize \ttfamily 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{section}{\numberline {8.40}Stats\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Counter$<$ Array\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type $>$ Class Template Reference}{229}{section.8.40}% -\contentsline {subsection}{\numberline {8.40.1}Detailed Description}{230}{subsection.8.40.1}% -\contentsline {subsection}{\numberline {8.40.2}Constructor \& Destructor Documentation}{230}{subsection.8.40.2}% -\contentsline {subsubsection}{\numberline {8.40.2.1}StatsCounter()\hspace {0.1cm}{\footnotesize \ttfamily 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{\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Dyn\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Data Class Reference}{213}{section.8.35}% +\contentsline {subsection}{\numberline {8.35.1}Detailed Description}{214}{subsection.8.35.1}% +\contentsline {subsection}{\numberline {8.35.2}Constructor \& Destructor Documentation}{214}{subsection.8.35.2}% +\contentsline {subsubsection}{\numberline {8.35.2.1}PhyloRuleDynData()}{214}{subsubsection.8.35.2.1}% +\contentsline {subsubsection}{\numberline {8.35.2.2}$\sim $PhyloRuleDynData()}{214}{subsubsection.8.35.2.2}% +\contentsline {subsection}{\numberline {8.35.3}Member Function Documentation}{214}{subsection.8.35.3}% +\contentsline {subsubsection}{\numberline {8.35.3.1}operator()()}{214}{subsubsection.8.35.3.1}% +\contentsline {subsection}{\numberline {8.35.4}Member Data Documentation}{214}{subsection.8.35.4}% +\contentsline {subsubsection}{\numberline {8.35.4.1}counts}{214}{subsubsection.8.35.4.1}% +\contentsline {subsubsection}{\numberline {8.35.4.2}duplication}{215}{subsubsection.8.35.4.2}% +\contentsline {subsubsection}{\numberline {8.35.4.3}lb}{215}{subsubsection.8.35.4.3}% +\contentsline {subsubsection}{\numberline {8.35.4.4}pos}{215}{subsubsection.8.35.4.4}% +\contentsline {subsubsection}{\numberline {8.35.4.5}ub}{215}{subsubsection.8.35.4.5}% +\contentsline {section}{\numberline {8.36}Power\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Set$<$ Array\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Rule\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type $>$ Class Template Reference}{215}{section.8.36}% +\contentsline {subsection}{\numberline {8.36.1}Detailed Description}{216}{subsection.8.36.1}% +\contentsline {subsection}{\numberline {8.36.2}Constructor \& Destructor Documentation}{217}{subsection.8.36.2}% +\contentsline {subsubsection}{\numberline {8.36.2.1}PowerSet()\hspace {0.1cm}{\footnotesize \ttfamily [1/3]}}{217}{subsubsection.8.36.2.1}% +\contentsline {subsubsection}{\numberline {8.36.2.2}PowerSet()\hspace {0.1cm}{\footnotesize \ttfamily [2/3]}}{217}{subsubsection.8.36.2.2}% +\contentsline {subsubsection}{\numberline {8.36.2.3}PowerSet()\hspace {0.1cm}{\footnotesize \ttfamily [3/3]}}{217}{subsubsection.8.36.2.3}% +\contentsline {subsubsection}{\numberline {8.36.2.4}$\sim $PowerSet()}{217}{subsubsection.8.36.2.4}% +\contentsline {subsection}{\numberline {8.36.3}Member Function Documentation}{217}{subsection.8.36.3}% +\contentsline {subsubsection}{\numberline {8.36.3.1}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{218}{subsubsection.8.36.3.1}% +\contentsline {subsubsection}{\numberline {8.36.3.2}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{218}{subsubsection.8.36.3.2}% +\contentsline {subsubsection}{\numberline {8.36.3.3}begin()}{218}{subsubsection.8.36.3.3}% +\contentsline {subsubsection}{\numberline {8.36.3.4}calc()}{218}{subsubsection.8.36.3.4}% +\contentsline {subsubsection}{\numberline {8.36.3.5}end()}{218}{subsubsection.8.36.3.5}% +\contentsline {subsubsection}{\numberline {8.36.3.6}get\_data()}{219}{subsubsection.8.36.3.6}% +\contentsline {subsubsection}{\numberline {8.36.3.7}get\_data\_ptr()}{219}{subsubsection.8.36.3.7}% +\contentsline {subsubsection}{\numberline {8.36.3.8}init\_support()}{219}{subsubsection.8.36.3.8}% +\contentsline {subsubsection}{\numberline {8.36.3.9}operator[]()}{219}{subsubsection.8.36.3.9}% +\contentsline {subsubsection}{\numberline {8.36.3.10}reset()}{219}{subsubsection.8.36.3.10}% +\contentsline {subsubsection}{\numberline {8.36.3.11}size()}{220}{subsubsection.8.36.3.11}% +\contentsline {subsection}{\numberline {8.36.4}Member Data Documentation}{220}{subsection.8.36.4}% +\contentsline {subsubsection}{\numberline {8.36.4.1}coordinates\_free}{220}{subsubsection.8.36.4.1}% +\contentsline {subsubsection}{\numberline {8.36.4.2}coordinates\_locked}{220}{subsubsection.8.36.4.2}% +\contentsline {subsubsection}{\numberline {8.36.4.3}data}{220}{subsubsection.8.36.4.3}% +\contentsline {subsubsection}{\numberline {8.36.4.4}EmptyArray}{220}{subsubsection.8.36.4.4}% +\contentsline {subsubsection}{\numberline {8.36.4.5}M}{221}{subsubsection.8.36.4.5}% +\contentsline {subsubsection}{\numberline {8.36.4.6}N}{221}{subsubsection.8.36.4.6}% +\contentsline {subsubsection}{\numberline {8.36.4.7}n\_free}{221}{subsubsection.8.36.4.7}% +\contentsline {subsubsection}{\numberline {8.36.4.8}n\_locked}{221}{subsubsection.8.36.4.8}% +\contentsline {subsubsection}{\numberline {8.36.4.9}rules}{221}{subsubsection.8.36.4.9}% +\contentsline {subsubsection}{\numberline {8.36.4.10}rules\_deleted}{222}{subsubsection.8.36.4.10}% +\contentsline {section}{\numberline {8.37}Progress Class Reference}{222}{section.8.37}% +\contentsline {subsection}{\numberline {8.37.1}Detailed Description}{222}{subsection.8.37.1}% +\contentsline {subsection}{\numberline {8.37.2}Constructor \& Destructor Documentation}{222}{subsection.8.37.2}% +\contentsline {subsubsection}{\numberline {8.37.2.1}Progress()}{222}{subsubsection.8.37.2.1}% +\contentsline {subsubsection}{\numberline {8.37.2.2}$\sim $Progress()}{223}{subsubsection.8.37.2.2}% +\contentsline {subsection}{\numberline {8.37.3}Member Function Documentation}{223}{subsection.8.37.3}% +\contentsline {subsubsection}{\numberline {8.37.3.1}end()}{223}{subsubsection.8.37.3.1}% +\contentsline {subsubsection}{\numberline {8.37.3.2}next()}{223}{subsubsection.8.37.3.2}% +\contentsline {section}{\numberline {8.38}Rule$<$ Array\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type $>$ Class Template Reference}{223}{section.8.38}% +\contentsline {subsection}{\numberline {8.38.1}Detailed Description}{224}{subsection.8.38.1}% +\contentsline {subsection}{\numberline {8.38.2}Constructor \& Destructor Documentation}{224}{subsection.8.38.2}% +\contentsline {subsubsection}{\numberline {8.38.2.1}Rule()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{224}{subsubsection.8.38.2.1}% +\contentsline {subsubsection}{\numberline {8.38.2.2}Rule()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{224}{subsubsection.8.38.2.2}% +\contentsline {subsubsection}{\numberline {8.38.2.3}$\sim $Rule()}{225}{subsubsection.8.38.2.3}% +\contentsline {subsection}{\numberline {8.38.3}Member Function Documentation}{225}{subsection.8.38.3}% +\contentsline {subsubsection}{\numberline {8.38.3.1}D()}{225}{subsubsection.8.38.3.1}% +\contentsline {subsubsection}{\numberline {8.38.3.2}get\_description()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{225}{subsubsection.8.38.3.2}% +\contentsline {subsubsection}{\numberline {8.38.3.3}get\_description()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{225}{subsubsection.8.38.3.3}% +\contentsline {subsubsection}{\numberline {8.38.3.4}get\_name()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{225}{subsubsection.8.38.3.4}% +\contentsline {subsubsection}{\numberline {8.38.3.5}get\_name()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{226}{subsubsection.8.38.3.5}% +\contentsline {subsubsection}{\numberline {8.38.3.6}operator()()}{226}{subsubsection.8.38.3.6}% +\contentsline {section}{\numberline {8.39}Rules$<$ Array\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type $>$ Class Template Reference}{226}{section.8.39}% +\contentsline {subsection}{\numberline {8.39.1}Detailed Description}{227}{subsection.8.39.1}% +\contentsline {subsection}{\numberline {8.39.2}Constructor \& Destructor Documentation}{227}{subsection.8.39.2}% +\contentsline {subsubsection}{\numberline {8.39.2.1}Rules()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{227}{subsubsection.8.39.2.1}% +\contentsline {subsubsection}{\numberline {8.39.2.2}Rules()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{227}{subsubsection.8.39.2.2}% +\contentsline {subsubsection}{\numberline {8.39.2.3}$\sim $Rules()}{228}{subsubsection.8.39.2.3}% +\contentsline {subsection}{\numberline {8.39.3}Member Function Documentation}{228}{subsection.8.39.3}% +\contentsline {subsubsection}{\numberline {8.39.3.1}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{228}{subsubsection.8.39.3.1}% +\contentsline {subsubsection}{\numberline {8.39.3.2}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{228}{subsubsection.8.39.3.2}% +\contentsline {subsubsection}{\numberline {8.39.3.3}begin()}{228}{subsubsection.8.39.3.3}% +\contentsline {subsubsection}{\numberline {8.39.3.4}end()}{228}{subsubsection.8.39.3.4}% +\contentsline {subsubsection}{\numberline {8.39.3.5}get\_descriptions()}{229}{subsubsection.8.39.3.5}% +\contentsline {subsubsection}{\numberline {8.39.3.6}get\_names()}{229}{subsubsection.8.39.3.6}% +\contentsline {subsubsection}{\numberline {8.39.3.7}get\_seq()}{229}{subsubsection.8.39.3.7}% +\contentsline {subsubsection}{\numberline {8.39.3.8}operator()()}{229}{subsubsection.8.39.3.8}% +\contentsline {subsubsection}{\numberline {8.39.3.9}operator=()}{230}{subsubsection.8.39.3.9}% +\contentsline {subsubsection}{\numberline {8.39.3.10}size()}{230}{subsubsection.8.39.3.10}% +\contentsline {section}{\numberline {8.40}Stats\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Counter$<$ Array\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type $>$ Class Template Reference}{230}{section.8.40}% +\contentsline {subsection}{\numberline {8.40.1}Detailed Description}{231}{subsection.8.40.1}% +\contentsline {subsection}{\numberline {8.40.2}Constructor \& Destructor Documentation}{231}{subsection.8.40.2}% +\contentsline {subsubsection}{\numberline {8.40.2.1}StatsCounter()\hspace {0.1cm}{\footnotesize \ttfamily [1/3]}}{231}{subsubsection.8.40.2.1}% +\contentsline {subsubsection}{\numberline {8.40.2.2}StatsCounter()\hspace {0.1cm}{\footnotesize \ttfamily [2/3]}}{232}{subsubsection.8.40.2.2}% +\contentsline {subsubsection}{\numberline {8.40.2.3}StatsCounter()\hspace {0.1cm}{\footnotesize \ttfamily [3/3]}}{232}{subsubsection.8.40.2.3}% +\contentsline {subsubsection}{\numberline {8.40.2.4}$\sim $StatsCounter()}{232}{subsubsection.8.40.2.4}% +\contentsline {subsection}{\numberline {8.40.3}Member Function Documentation}{232}{subsection.8.40.3}% +\contentsline {subsubsection}{\numberline {8.40.3.1}add\_counter()}{232}{subsubsection.8.40.3.1}% +\contentsline {subsubsection}{\numberline {8.40.3.2}count\_all()}{233}{subsubsection.8.40.3.2}% +\contentsline {subsubsection}{\numberline {8.40.3.3}count\_current()}{233}{subsubsection.8.40.3.3}% +\contentsline {subsubsection}{\numberline {8.40.3.4}count\_init()}{233}{subsubsection.8.40.3.4}% +\contentsline {subsubsection}{\numberline {8.40.3.5}get\_counters()}{233}{subsubsection.8.40.3.5}% +\contentsline {subsubsection}{\numberline {8.40.3.6}get\_descriptions()}{233}{subsubsection.8.40.3.6}% +\contentsline {subsubsection}{\numberline {8.40.3.7}get\_names()}{233}{subsubsection.8.40.3.7}% +\contentsline {subsubsection}{\numberline {8.40.3.8}reset\_array()}{233}{subsubsection.8.40.3.8}% +\contentsline {subsubsection}{\numberline {8.40.3.9}set\_counters()}{234}{subsubsection.8.40.3.9}% +\contentsline {subsubsection}{\numberline {8.40.3.10}size()}{234}{subsubsection.8.40.3.10}% +\contentsline {section}{\numberline {8.41}Support$<$ Array\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Counter\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Rule\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type, Data\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Rule\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Dyn\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\_\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Type $>$ Class Template Reference}{234}{section.8.41}% +\contentsline {subsection}{\numberline {8.41.1}Detailed Description}{236}{subsection.8.41.1}% +\contentsline {subsection}{\numberline {8.41.2}Constructor \& Destructor Documentation}{236}{subsection.8.41.2}% +\contentsline {subsubsection}{\numberline {8.41.2.1}Support()\hspace {0.1cm}{\footnotesize \ttfamily [1/3]}}{236}{subsubsection.8.41.2.1}% +\contentsline {subsubsection}{\numberline {8.41.2.2}Support()\hspace {0.1cm}{\footnotesize \ttfamily [2/3]}}{237}{subsubsection.8.41.2.2}% +\contentsline {subsubsection}{\numberline {8.41.2.3}Support()\hspace {0.1cm}{\footnotesize \ttfamily [3/3]}}{237}{subsubsection.8.41.2.3}% +\contentsline {subsubsection}{\numberline {8.41.2.4}$\sim $Support()}{237}{subsubsection.8.41.2.4}% +\contentsline {subsection}{\numberline {8.41.3}Member Function Documentation}{237}{subsection.8.41.3}% +\contentsline {subsubsection}{\numberline {8.41.3.1}add\_counter()}{237}{subsubsection.8.41.3.1}% +\contentsline {subsubsection}{\numberline {8.41.3.2}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{238}{subsubsection.8.41.3.2}% +\contentsline {subsubsection}{\numberline {8.41.3.3}add\_rule()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{238}{subsubsection.8.41.3.3}% +\contentsline {subsubsection}{\numberline {8.41.3.4}add\_rule\_dyn()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{238}{subsubsection.8.41.3.4}% +\contentsline {subsubsection}{\numberline {8.41.3.5}add\_rule\_dyn()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{238}{subsubsection.8.41.3.5}% +\contentsline {subsubsection}{\numberline {8.41.3.6}calc()}{238}{subsubsection.8.41.3.6}% +\contentsline {subsubsection}{\numberline {8.41.3.7}eval\_rules\_dyn()}{239}{subsubsection.8.41.3.7}% +\contentsline {subsubsection}{\numberline {8.41.3.8}get\_counters()}{239}{subsubsection.8.41.3.8}% +\contentsline {subsubsection}{\numberline {8.41.3.9}get\_counts()}{239}{subsubsection.8.41.3.9}% +\contentsline {subsubsection}{\numberline {8.41.3.10}get\_current\_stats()}{240}{subsubsection.8.41.3.10}% +\contentsline {subsubsection}{\numberline {8.41.3.11}get\_data()}{240}{subsubsection.8.41.3.11}% +\contentsline {subsubsection}{\numberline {8.41.3.12}get\_rules()}{240}{subsubsection.8.41.3.12}% +\contentsline {subsubsection}{\numberline {8.41.3.13}get\_rules\_dyn()}{240}{subsubsection.8.41.3.13}% +\contentsline {subsubsection}{\numberline {8.41.3.14}init\_support()}{241}{subsubsection.8.41.3.14}% +\contentsline {subsubsection}{\numberline {8.41.3.15}print()}{241}{subsubsection.8.41.3.15}% +\contentsline {subsubsection}{\numberline {8.41.3.16}reset\_array()\hspace {0.1cm}{\footnotesize \ttfamily [1/2]}}{241}{subsubsection.8.41.3.16}% +\contentsline {subsubsection}{\numberline {8.41.3.17}reset\_array()\hspace {0.1cm}{\footnotesize \ttfamily [2/2]}}{241}{subsubsection.8.41.3.17}% +\contentsline {subsubsection}{\numberline {8.41.3.18}set\_counters()}{242}{subsubsection.8.41.3.18}% +\contentsline {subsubsection}{\numberline {8.41.3.19}set\_rules()}{242}{subsubsection.8.41.3.19}% +\contentsline {subsubsection}{\numberline {8.41.3.20}set\_rules\_dyn()}{242}{subsubsection.8.41.3.20}% +\contentsline {subsection}{\numberline {8.41.4}Member Data Documentation}{242}{subsection.8.41.4}% +\contentsline {subsubsection}{\numberline {8.41.4.1}change\_stats}{242}{subsubsection.8.41.4.1}% +\contentsline {subsubsection}{\numberline {8.41.4.2}coordiantes\_n\_free}{243}{subsubsection.8.41.4.2}% +\contentsline {subsubsection}{\numberline {8.41.4.3}coordiantes\_n\_locked}{243}{subsubsection.8.41.4.3}% +\contentsline {subsubsection}{\numberline {8.41.4.4}coordinates\_free}{243}{subsubsection.8.41.4.4}% +\contentsline {subsubsection}{\numberline {8.41.4.5}coordinates\_locked}{243}{subsubsection.8.41.4.5}% +\contentsline {subsubsection}{\numberline {8.41.4.6}current\_stats}{243}{subsubsection.8.41.4.6}% +\contentsline {subsubsection}{\numberline {8.41.4.7}delete\_counters}{244}{subsubsection.8.41.4.7}% +\contentsline {subsubsection}{\numberline {8.41.4.8}delete\_rules}{244}{subsubsection.8.41.4.8}% +\contentsline {subsubsection}{\numberline {8.41.4.9}delete\_rules\_dyn}{244}{subsubsection.8.41.4.9}% +\contentsline {subsubsection}{\numberline {8.41.4.10}hashes}{244}{subsubsection.8.41.4.10}% +\contentsline {subsubsection}{\numberline {8.41.4.11}hashes\_initialized}{244}{subsubsection.8.41.4.11}% +\contentsline {subsubsection}{\numberline {8.41.4.12}M}{245}{subsubsection.8.41.4.12}% +\contentsline {subsubsection}{\numberline {8.41.4.13}max\_num\_elements}{245}{subsubsection.8.41.4.13}% +\contentsline {subsubsection}{\numberline {8.41.4.14}N}{245}{subsubsection.8.41.4.14}% +\contentsline {subsubsection}{\numberline {8.41.4.15}n\_counters}{245}{subsubsection.8.41.4.15}% +\contentsline {section}{\numberline {8.42}vec\discretionary {\mbox {\scriptsize $\DOTSB \leftarrow \joinrel \rhook $}}{}{}Hasher$<$ T $>$ Struct Template Reference}{245}{section.8.42}% +\contentsline {subsection}{\numberline {8.42.1}Detailed Description}{246}{subsection.8.42.1}% +\contentsline {subsection}{\numberline {8.42.2}Member Function Documentation}{246}{subsection.8.42.2}% +\contentsline {subsubsection}{\numberline {8.42.2.1}operator()()}{246}{subsubsection.8.42.2.1}% \contentsline {chapter}{\numberline {9}File Documentation}{247}{chapter.9}% \contentsline {section}{\numberline {9.1}include/barry/barray-\/bones.hpp File Reference}{247}{section.9.1}% \contentsline {section}{\numberline {9.2}include/barry/barray-\/iterator.hpp File Reference}{247}{section.9.2}% diff --git a/latex/rules-bones_8hpp__dep__incl.pdf b/latex/rules-bones_8hpp__dep__incl.pdf index 5120dd3dd..63836136d 100644 Binary files a/latex/rules-bones_8hpp__dep__incl.pdf and b/latex/rules-bones_8hpp__dep__incl.pdf differ diff --git a/latex/rules-meat_8hpp__dep__incl.pdf b/latex/rules-meat_8hpp__dep__incl.pdf index 88cc8c31d..baaf0d86a 100644 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                                                                                                                                                    369  Support<Array_Type,Data_Counter_Type,Data_Rule_Type,Data_Rule_Dyn_Type> * get_support_fun();
                                                                                                                                                    370 
                                                                                                                                                    382  std::vector< std::vector< double > > * get_stats_target();
                                                                                                                                                    -
                                                                                                                                                    383  std::vector< double > * get_stats_support();
                                                                                                                                                    -
                                                                                                                                                    384  std::vector< size_t > * get_arrays2support();
                                                                                                                                                    -
                                                                                                                                                    385  std::vector< std::vector< Array_Type > > * get_pset_arrays();
                                                                                                                                                    -
                                                                                                                                                    386  std::vector< std::vector<double> > * get_pset_stats();
                                                                                                                                                    -
                                                                                                                                                    387  std::vector< std::vector<double> > * get_pset_probs();
                                                                                                                                                    -
                                                                                                                                                    389 
                                                                                                                                                    -
                                                                                                                                                    400  void set_transform_model(
                                                                                                                                                    -
                                                                                                                                                    401  std::function<std::vector<double>(double*,size_t)> fun,
                                                                                                                                                    -
                                                                                                                                                    402  std::vector< std::string > names
                                                                                                                                                    -
                                                                                                                                                    403  );
                                                                                                                                                    -
                                                                                                                                                    404  std::vector<double> transform_model(
                                                                                                                                                    -
                                                                                                                                                    405  double * data,
                                                                                                                                                    -
                                                                                                                                                    406  size_t k
                                                                                                                                                    -
                                                                                                                                                    407  );
                                                                                                                                                    -
                                                                                                                                                    409 
                                                                                                                                                    -
                                                                                                                                                    410 };
                                                                                                                                                    +
                                                                                                                                                    383  std::vector< double > * get_stats_support();
                                                                                                                                                    +
                                                                                                                                                    384  std::vector< size_t > * get_stats_support_sizes();
                                                                                                                                                    +
                                                                                                                                                    385  std::vector< size_t > * get_stats_support_sizes_acc();
                                                                                                                                                    +
                                                                                                                                                    386  std::vector< size_t > * get_arrays2support();
                                                                                                                                                    +
                                                                                                                                                    387  std::vector< std::vector< Array_Type > > * get_pset_arrays();
                                                                                                                                                    +
                                                                                                                                                    388  std::vector< std::vector<double> > * get_pset_stats();
                                                                                                                                                    +
                                                                                                                                                    389  std::vector< std::vector<double> > * get_pset_probs();
                                                                                                                                                    +
                                                                                                                                                    391 
                                                                                                                                                    +
                                                                                                                                                    402  void set_transform_model(
                                                                                                                                                    +
                                                                                                                                                    403  std::function<std::vector<double>(double*,size_t)> fun,
                                                                                                                                                    +
                                                                                                                                                    404  std::vector< std::string > names
                                                                                                                                                    +
                                                                                                                                                    405  );
                                                                                                                                                    +
                                                                                                                                                    406  std::vector<double> transform_model(
                                                                                                                                                    +
                                                                                                                                                    407  double * data,
                                                                                                                                                    +
                                                                                                                                                    408  size_t k
                                                                                                                                                    +
                                                                                                                                                    409  );
                                                                                                                                                    411 
                                                                                                                                                    -
                                                                                                                                                    412 
                                                                                                                                                    -
                                                                                                                                                    413 #endif
                                                                                                                                                    +
                                                                                                                                                    412 };
                                                                                                                                                    +
                                                                                                                                                    413 
                                                                                                                                                    +
                                                                                                                                                    414 
                                                                                                                                                    +
                                                                                                                                                    415 #endif
                                                                                                                                                    BARRY_NCORES_ARG
                                                                                                                                                    #define BARRY_NCORES_ARG(default)
                                                                                                                                                    Definition: barry-macros.hpp:15
                                                                                                                                                    BArray
                                                                                                                                                    Baseline class for binary arrays.
                                                                                                                                                    Definition: barray-bones.hpp:28
                                                                                                                                                    Counter
                                                                                                                                                    A counter function based on change statistics.
                                                                                                                                                    Definition: counters-bones.hpp:35
                                                                                                                                                    @@ -332,6 +334,7 @@
                                                                                                                                                    Model::transform_model_term_names
                                                                                                                                                    std::vector< std::string > transform_model_term_names
                                                                                                                                                    Definition: model-bones.hpp:127
                                                                                                                                                    Model::get_rengine
                                                                                                                                                    const std::mt19937 * get_rengine() const
                                                                                                                                                    Definition: model-meat.hpp:1518
                                                                                                                                                    Model::delete_rules
                                                                                                                                                    bool delete_rules
                                                                                                                                                    Definition: model-bones.hpp:106
                                                                                                                                                    +
                                                                                                                                                    Model::get_stats_support_sizes_acc
                                                                                                                                                    std::vector< size_t > * get_stats_support_sizes_acc()
                                                                                                                                                    Accumulated number of vectors included in the support.
                                                                                                                                                    Definition: model-meat.hpp:1567
                                                                                                                                                    Model::rules_dyn
                                                                                                                                                    Rules< Array_Type, Data_Rule_Dyn_Type > * rules_dyn
                                                                                                                                                    Definition: model-bones.hpp:95
                                                                                                                                                    Model::rules
                                                                                                                                                    Rules< Array_Type, Data_Rule_Type > * rules
                                                                                                                                                    Definition: model-bones.hpp:94
                                                                                                                                                    Model::counter_fun
                                                                                                                                                    StatsCounter< Array_Type, Data_Counter_Type > counter_fun
                                                                                                                                                    Definition: model-bones.hpp:97
                                                                                                                                                    @@ -339,18 +342,18 @@
                                                                                                                                                    Model::add_counter
                                                                                                                                                    void add_counter(Counter< Array_Type, Data_Counter_Type > &counter)
                                                                                                                                                    Definition: model-meat.hpp:363
                                                                                                                                                    Model::get_counters
                                                                                                                                                    Counters< Array_Type, Data_Counter_Type > * get_counters()
                                                                                                                                                    Definition: model-meat.hpp:1523
                                                                                                                                                    Model::stats_target
                                                                                                                                                    std::vector< std::vector< double > > stats_target
                                                                                                                                                    Target statistics of the model.
                                                                                                                                                    Definition: model-bones.hpp:66
                                                                                                                                                    -
                                                                                                                                                    Model::get_pset_probs
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_probs()
                                                                                                                                                    Definition: model-meat.hpp:1577
                                                                                                                                                    +
                                                                                                                                                    Model::get_pset_probs
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_probs()
                                                                                                                                                    Definition: model-meat.hpp:1593
                                                                                                                                                    Model::sample
                                                                                                                                                    Array_Type sample(const Array_Type &Array_, const std::vector< double > &params={})
                                                                                                                                                    Definition: model-meat.hpp:1290
                                                                                                                                                    Model::update_normalizing_constants
                                                                                                                                                    void update_normalizing_constants(const std::vector< double > &params,)
                                                                                                                                                    Computes the normalizing constant for a given set of parameters.
                                                                                                                                                    Definition: model-meat.hpp:134
                                                                                                                                                    Model::add_rule_dyn
                                                                                                                                                    void add_rule_dyn(Rule< Array_Type, Data_Rule_Dyn_Type > &rule)
                                                                                                                                                    Definition: model-meat.hpp:446
                                                                                                                                                    Model::stats_support
                                                                                                                                                    std::vector< double > stats_support
                                                                                                                                                    Sufficient statistics of the model (support)
                                                                                                                                                    Definition: model-bones.hpp:62
                                                                                                                                                    Model::store_psets
                                                                                                                                                    void store_psets() noexcept
                                                                                                                                                    Definition: model-meat.hpp:350
                                                                                                                                                    Model::conditional_prob
                                                                                                                                                    double conditional_prob(const Array_Type &Array_, const std::vector< double > &params, size_t i, size_t j)
                                                                                                                                                    Conditional probability ("Gibbs sampler")
                                                                                                                                                    Definition: model-meat.hpp:1485
                                                                                                                                                    -
                                                                                                                                                    Model::get_pset_stats
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_stats()
                                                                                                                                                    Statistics of the support(s)
                                                                                                                                                    Definition: model-meat.hpp:1571
                                                                                                                                                    +
                                                                                                                                                    Model::get_pset_stats
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_stats()
                                                                                                                                                    Statistics of the support(s)
                                                                                                                                                    Definition: model-meat.hpp:1587
                                                                                                                                                    Model::operator=
                                                                                                                                                    Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > & operator=(const Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > &Model_)
                                                                                                                                                    Definition: model-meat.hpp:298
                                                                                                                                                    Model::get_stats_target
                                                                                                                                                    std::vector< std::vector< double > > * get_stats_target()
                                                                                                                                                    Raw pointers to the support and target statistics.
                                                                                                                                                    Definition: model-meat.hpp:1544
                                                                                                                                                    Model::delete_rengine
                                                                                                                                                    bool delete_rengine
                                                                                                                                                    Definition: model-bones.hpp:43
                                                                                                                                                    -
                                                                                                                                                    Model::get_pset_arrays
                                                                                                                                                    std::vector< std::vector< Array_Type > > * get_pset_arrays()
                                                                                                                                                    Definition: model-meat.hpp:1565
                                                                                                                                                    +
                                                                                                                                                    Model::get_pset_arrays
                                                                                                                                                    std::vector< std::vector< Array_Type > > * get_pset_arrays()
                                                                                                                                                    Definition: model-meat.hpp:1581
                                                                                                                                                    Model::~Model
                                                                                                                                                    virtual ~Model()
                                                                                                                                                    Definition: model-bones.hpp:172
                                                                                                                                                    Model::get_support_fun
                                                                                                                                                    Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > * get_support_fun()
                                                                                                                                                    Definition: model-meat.hpp:1539
                                                                                                                                                    Model::gen_key
                                                                                                                                                    std::vector< double > gen_key(const Array_Type &Array_)
                                                                                                                                                    Definition: model-meat.hpp:356
                                                                                                                                                    @@ -360,7 +363,7 @@
                                                                                                                                                    Model::colnames
                                                                                                                                                    std::vector< std::string > colnames() const
                                                                                                                                                    Definition: model-meat.hpp:1193
                                                                                                                                                    Model::likelihood
                                                                                                                                                    double likelihood(const std::vector< double > &params, const size_t &i, bool as_log=false, bool no_update_normconst=false)
                                                                                                                                                    Definition: model-meat.hpp:650
                                                                                                                                                    Model::stats_support_sizes_acc
                                                                                                                                                    std::vector< size_t > stats_support_sizes_acc
                                                                                                                                                    Accumulated number of vectors included in the support.
                                                                                                                                                    Definition: model-bones.hpp:64
                                                                                                                                                    -
                                                                                                                                                    Model::get_stats_support
                                                                                                                                                    std::vector< double > * get_stats_support()
                                                                                                                                                    Definition: model-meat.hpp:1551
                                                                                                                                                    +
                                                                                                                                                    Model::get_stats_support
                                                                                                                                                    std::vector< double > * get_stats_support()
                                                                                                                                                    Sufficient statistics of the support(s)
                                                                                                                                                    Definition: model-meat.hpp:1551
                                                                                                                                                    Model::set_rules
                                                                                                                                                    void set_rules(Rules< Array_Type, Data_Rule_Type > *rules_)
                                                                                                                                                    Definition: model-meat.hpp:428
                                                                                                                                                    Model::pset_stats
                                                                                                                                                    std::vector< std::vector< double > > pset_stats
                                                                                                                                                    Statistics of the support(s)
                                                                                                                                                    Definition: model-bones.hpp:84
                                                                                                                                                    Model::nrules
                                                                                                                                                    size_t nrules() const noexcept
                                                                                                                                                    Definition: model-meat.hpp:1163
                                                                                                                                                    @@ -383,14 +386,15 @@
                                                                                                                                                    Model::set_rules_dyn
                                                                                                                                                    void set_rules_dyn(Rules< Array_Type, Data_Rule_Dyn_Type > *rules_)
                                                                                                                                                    Definition: model-meat.hpp:470
                                                                                                                                                    Model::pset_arrays
                                                                                                                                                    std::vector< std::vector< Array_Type > > pset_arrays
                                                                                                                                                    Arrays of the support(s)
                                                                                                                                                    Definition: model-bones.hpp:83
                                                                                                                                                    Model::transform_model_fun
                                                                                                                                                    std::function< std::vector< double >double *, size_t k)> transform_model_fun
                                                                                                                                                    Transformation of the model.
                                                                                                                                                    Definition: model-bones.hpp:125
                                                                                                                                                    -
                                                                                                                                                    Model::get_arrays2support
                                                                                                                                                    std::vector< size_t > * get_arrays2support()
                                                                                                                                                    Definition: model-meat.hpp:1558
                                                                                                                                                    +
                                                                                                                                                    Model::get_arrays2support
                                                                                                                                                    std::vector< size_t > * get_arrays2support()
                                                                                                                                                    Definition: model-meat.hpp:1574
                                                                                                                                                    Model::keys2support
                                                                                                                                                    MapVec_type< double, size_t > keys2support
                                                                                                                                                    Map of types of arrays to support sets.
                                                                                                                                                    Definition: model-bones.hpp:74
                                                                                                                                                    Model::stats_support_sizes
                                                                                                                                                    std::vector< size_t > stats_support_sizes
                                                                                                                                                    Number of vectors included in the support.
                                                                                                                                                    Definition: model-bones.hpp:63
                                                                                                                                                    Model::get_normalizing_constants
                                                                                                                                                    std::vector< double > & get_normalizing_constants()
                                                                                                                                                    Definition: model-meat.hpp:1000
                                                                                                                                                    Model::normalizing_constants
                                                                                                                                                    std::vector< double > normalizing_constants
                                                                                                                                                    Definition: model-bones.hpp:102
                                                                                                                                                    +
                                                                                                                                                    Model::get_stats_support_sizes
                                                                                                                                                    std::vector< size_t > * get_stats_support_sizes()
                                                                                                                                                    Number of vectors included in the support.
                                                                                                                                                    Definition: model-meat.hpp:1559
                                                                                                                                                    Model::first_calc_done
                                                                                                                                                    std::vector< bool > first_calc_done
                                                                                                                                                    Definition: model-bones.hpp:103
                                                                                                                                                    -
                                                                                                                                                    Model::set_transform_model
                                                                                                                                                    void set_transform_model(std::function< std::vector< double >(double *, size_t)> fun, std::vector< std::string > names)
                                                                                                                                                    Set the transform_model_fun object.
                                                                                                                                                    Definition: model-meat.hpp:1583
                                                                                                                                                    +
                                                                                                                                                    Model::set_transform_model
                                                                                                                                                    void set_transform_model(std::function< std::vector< double >(double *, size_t)> fun, std::vector< std::string > names)
                                                                                                                                                    Set the transform_model_fun object.
                                                                                                                                                    Definition: model-meat.hpp:1599
                                                                                                                                                    Model::counters
                                                                                                                                                    Counters< Array_Type, Data_Counter_Type > * counters
                                                                                                                                                    Definition: model-bones.hpp:93
                                                                                                                                                    Model::get_pset
                                                                                                                                                    const std::vector< Array_Type > * get_pset(const size_t &i)
                                                                                                                                                    Definition: model-meat.hpp:1008
                                                                                                                                                    Model::pset_probs
                                                                                                                                                    std::vector< std::vector< double > > pset_probs
                                                                                                                                                    Probabilities of the support(s)
                                                                                                                                                    Definition: model-bones.hpp:85
                                                                                                                                                    @@ -423,7 +427,7 @@ diff --git a/model-meat_8hpp.html b/model-meat_8hpp.html index 5912bd5b3..92d5c22e4 100644 --- a/model-meat_8hpp.html +++ b/model-meat_8hpp.html @@ -230,7 +230,7 @@

                                                                                                                                                    • include
                                                                                                                                                    • barry
                                                                                                                                                    • model-meat.hpp
                                                                                                                                                      • -
                                                                                                                                                    • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                      • +
                                                                                                                                                    • Generated on Wed Oct 4 2023 18:29:40 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                    diff --git a/model-meat_8hpp_source.html b/model-meat_8hpp_source.html index 97bbb2d9d..2419cf034 100644 --- a/model-meat_8hpp_source.html +++ b/model-meat_8hpp_source.html @@ -1639,151 +1639,167 @@
                                                                                                                                                    1553  return &stats_support;
                                                                                                                                                    1554 }
                                                                                                                                                    1555 
                                                                                                                                                    -
                                                                                                                                                    1556 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    -
                                                                                                                                                    1557 inline std::vector< size_t > *
                                                                                                                                                    -
                                                                                                                                                    1558 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_arrays2support()
                                                                                                                                                    -
                                                                                                                                                    1559 {
                                                                                                                                                    -
                                                                                                                                                    1560  return &arrays2support;
                                                                                                                                                    -
                                                                                                                                                    1561 }
                                                                                                                                                    -
                                                                                                                                                    1562 
                                                                                                                                                    -
                                                                                                                                                    1563 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    -
                                                                                                                                                    1564 inline std::vector< std::vector< Array_Type > > *
                                                                                                                                                    -
                                                                                                                                                    1565 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_pset_arrays() {
                                                                                                                                                    -
                                                                                                                                                    1566  return &pset_arrays;
                                                                                                                                                    -
                                                                                                                                                    1567 }
                                                                                                                                                    -
                                                                                                                                                    1568 
                                                                                                                                                    -
                                                                                                                                                    1569 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    -
                                                                                                                                                    1570 inline std::vector< std::vector<double> > *
                                                                                                                                                    -
                                                                                                                                                    1571 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_pset_stats() {
                                                                                                                                                    -
                                                                                                                                                    1572  return &pset_stats;
                                                                                                                                                    -
                                                                                                                                                    1573 }
                                                                                                                                                    -
                                                                                                                                                    1574 
                                                                                                                                                    -
                                                                                                                                                    1575 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    -
                                                                                                                                                    1576 inline std::vector< std::vector<double> > *
                                                                                                                                                    -
                                                                                                                                                    1577 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_pset_probs() {
                                                                                                                                                    -
                                                                                                                                                    1578  return &pset_probs;
                                                                                                                                                    -
                                                                                                                                                    1579 }
                                                                                                                                                    -
                                                                                                                                                    1580 
                                                                                                                                                    -
                                                                                                                                                    1581 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    -
                                                                                                                                                    1582 inline void
                                                                                                                                                    -
                                                                                                                                                    1583 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::set_transform_model(
                                                                                                                                                    -
                                                                                                                                                    1584  std::function<std::vector<double>(double *,size_t)> fun,
                                                                                                                                                    -
                                                                                                                                                    1585  std::vector< std::string > names
                                                                                                                                                    -
                                                                                                                                                    1586  )
                                                                                                                                                    -
                                                                                                                                                    1587 {
                                                                                                                                                    -
                                                                                                                                                    1588 
                                                                                                                                                    -
                                                                                                                                                    1589  if (transform_model_fun)
                                                                                                                                                    -
                                                                                                                                                    1590  throw std::logic_error("A transformation function for the model has already been established.");
                                                                                                                                                    -
                                                                                                                                                    1591 
                                                                                                                                                    -
                                                                                                                                                    1592  transform_model_fun = fun;
                                                                                                                                                    -
                                                                                                                                                    1593  transform_model_term_names = names;
                                                                                                                                                    -
                                                                                                                                                    1594 
                                                                                                                                                    -
                                                                                                                                                    1595  size_t k = counters->size();
                                                                                                                                                    +
                                                                                                                                                    1556 // Implementation of get_stats_support_sizes()
                                                                                                                                                    +
                                                                                                                                                    1557 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    +
                                                                                                                                                    1558 inline std::vector< size_t > *
                                                                                                                                                    +
                                                                                                                                                    1559 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_stats_support_sizes()
                                                                                                                                                    +
                                                                                                                                                    1560 {
                                                                                                                                                    +
                                                                                                                                                    1561  return &stats_support_sizes;
                                                                                                                                                    +
                                                                                                                                                    1562 }
                                                                                                                                                    +
                                                                                                                                                    1563 
                                                                                                                                                    +
                                                                                                                                                    1564 // Implementation of get_stats_support_sizes_acc()
                                                                                                                                                    +
                                                                                                                                                    1565 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    +
                                                                                                                                                    1566 inline std::vector< size_t > *
                                                                                                                                                    +
                                                                                                                                                    1567 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_stats_support_sizes_acc()
                                                                                                                                                    +
                                                                                                                                                    1568 {
                                                                                                                                                    +
                                                                                                                                                    1569  return &stats_support_sizes_acc;
                                                                                                                                                    +
                                                                                                                                                    1570 }
                                                                                                                                                    +
                                                                                                                                                    1571 
                                                                                                                                                    +
                                                                                                                                                    1572 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    +
                                                                                                                                                    1573 inline std::vector< size_t > *
                                                                                                                                                    +
                                                                                                                                                    1574 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_arrays2support()
                                                                                                                                                    +
                                                                                                                                                    1575 {
                                                                                                                                                    +
                                                                                                                                                    1576  return &arrays2support;
                                                                                                                                                    +
                                                                                                                                                    1577 }
                                                                                                                                                    +
                                                                                                                                                    1578 
                                                                                                                                                    +
                                                                                                                                                    1579 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    +
                                                                                                                                                    1580 inline std::vector< std::vector< Array_Type > > *
                                                                                                                                                    +
                                                                                                                                                    1581 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_pset_arrays() {
                                                                                                                                                    +
                                                                                                                                                    1582  return &pset_arrays;
                                                                                                                                                    +
                                                                                                                                                    1583 }
                                                                                                                                                    +
                                                                                                                                                    1584 
                                                                                                                                                    +
                                                                                                                                                    1585 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    +
                                                                                                                                                    1586 inline std::vector< std::vector<double> > *
                                                                                                                                                    +
                                                                                                                                                    1587 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_pset_stats() {
                                                                                                                                                    +
                                                                                                                                                    1588  return &pset_stats;
                                                                                                                                                    +
                                                                                                                                                    1589 }
                                                                                                                                                    +
                                                                                                                                                    1590 
                                                                                                                                                    +
                                                                                                                                                    1591 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    +
                                                                                                                                                    1592 inline std::vector< std::vector<double> > *
                                                                                                                                                    +
                                                                                                                                                    1593 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::get_pset_probs() {
                                                                                                                                                    +
                                                                                                                                                    1594  return &pset_probs;
                                                                                                                                                    +
                                                                                                                                                    1595 }
                                                                                                                                                    1596 
                                                                                                                                                    -
                                                                                                                                                    1597  auto stats_support_old = stats_support;
                                                                                                                                                    -
                                                                                                                                                    1598 
                                                                                                                                                    -
                                                                                                                                                    1599  // Applying over the support
                                                                                                                                                    -
                                                                                                                                                    1600  for (size_t nsupport = 0u; nsupport < stats_support_sizes.size(); ++nsupport)
                                                                                                                                                    -
                                                                                                                                                    1601  {
                                                                                                                                                    -
                                                                                                                                                    1602 
                                                                                                                                                    -
                                                                                                                                                    1603  // How many observations in the support
                                                                                                                                                    -
                                                                                                                                                    1604  size_t n = stats_support_sizes[nsupport];
                                                                                                                                                    -
                                                                                                                                                    1605 
                                                                                                                                                    -
                                                                                                                                                    1606  // Iterating through each observation in the nsupport'th
                                                                                                                                                    -
                                                                                                                                                    1607  for (size_t i = 0; i < n; ++i)
                                                                                                                                                    -
                                                                                                                                                    1608  {
                                                                                                                                                    -
                                                                                                                                                    1609 
                                                                                                                                                    -
                                                                                                                                                    1610  // Applying transformation and adding to the new set
                                                                                                                                                    -
                                                                                                                                                    1611  auto res = transform_model_fun(
                                                                                                                                                    -
                                                                                                                                                    1612  &stats_support_old[
                                                                                                                                                    -
                                                                                                                                                    1613  stats_support_sizes_acc[nsupport] * (k + 1u) +
                                                                                                                                                    -
                                                                                                                                                    1614  i * (k + 1u) + 1u
                                                                                                                                                    -
                                                                                                                                                    1615  ],
                                                                                                                                                    -
                                                                                                                                                    1616  k
                                                                                                                                                    -
                                                                                                                                                    1617  );
                                                                                                                                                    +
                                                                                                                                                    1597 template <typename Array_Type, typename Data_Counter_Type, typename Data_Rule_Type, typename Data_Rule_Dyn_Type>
                                                                                                                                                    +
                                                                                                                                                    1598 inline void
                                                                                                                                                    +
                                                                                                                                                    1599 Model<Array_Type,Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type>::set_transform_model(
                                                                                                                                                    +
                                                                                                                                                    1600  std::function<std::vector<double>(double *,size_t)> fun,
                                                                                                                                                    +
                                                                                                                                                    1601  std::vector< std::string > names
                                                                                                                                                    +
                                                                                                                                                    1602  )
                                                                                                                                                    +
                                                                                                                                                    1603 {
                                                                                                                                                    +
                                                                                                                                                    1604 
                                                                                                                                                    +
                                                                                                                                                    1605  if (transform_model_fun)
                                                                                                                                                    +
                                                                                                                                                    1606  throw std::logic_error("A transformation function for the model has already been established.");
                                                                                                                                                    +
                                                                                                                                                    1607 
                                                                                                                                                    +
                                                                                                                                                    1608  transform_model_fun = fun;
                                                                                                                                                    +
                                                                                                                                                    1609  transform_model_term_names = names;
                                                                                                                                                    +
                                                                                                                                                    1610 
                                                                                                                                                    +
                                                                                                                                                    1611  size_t k = counters->size();
                                                                                                                                                    +
                                                                                                                                                    1612 
                                                                                                                                                    +
                                                                                                                                                    1613  auto stats_support_old = stats_support;
                                                                                                                                                    +
                                                                                                                                                    1614 
                                                                                                                                                    +
                                                                                                                                                    1615  // Applying over the support
                                                                                                                                                    +
                                                                                                                                                    1616  for (size_t nsupport = 0u; nsupport < stats_support_sizes.size(); ++nsupport)
                                                                                                                                                    +
                                                                                                                                                    1617  {
                                                                                                                                                    1618 
                                                                                                                                                    -
                                                                                                                                                    1619  if (res.size() != transform_model_term_names.size())
                                                                                                                                                    -
                                                                                                                                                    1620  throw std::length_error(
                                                                                                                                                    -
                                                                                                                                                    1621  std::string("The transform vector from -transform_model_fun- ") +
                                                                                                                                                    -
                                                                                                                                                    1622  std::string(" does not match the size of ") +
                                                                                                                                                    -
                                                                                                                                                    1623  std::string("-transform_model_term_names-.")
                                                                                                                                                    -
                                                                                                                                                    1624  );
                                                                                                                                                    +
                                                                                                                                                    1619  // How many observations in the support
                                                                                                                                                    +
                                                                                                                                                    1620  size_t n = stats_support_sizes[nsupport];
                                                                                                                                                    +
                                                                                                                                                    1621 
                                                                                                                                                    +
                                                                                                                                                    1622  // Iterating through each observation in the nsupport'th
                                                                                                                                                    +
                                                                                                                                                    1623  for (size_t i = 0; i < n; ++i)
                                                                                                                                                    +
                                                                                                                                                    1624  {
                                                                                                                                                    1625 
                                                                                                                                                    -
                                                                                                                                                    1626  // Resizing stats_support if the transform stats do not match the
                                                                                                                                                    -
                                                                                                                                                    1627  // previous size
                                                                                                                                                    -
                                                                                                                                                    1628  if ((nsupport == 0u) && (i == 0u) && (res.size() != k))
                                                                                                                                                    -
                                                                                                                                                    1629  stats_support.resize(
                                                                                                                                                    -
                                                                                                                                                    1630  (res.size() + 1) * (
                                                                                                                                                    -
                                                                                                                                                    1631  stats_support_sizes_acc.back() +
                                                                                                                                                    -
                                                                                                                                                    1632  stats_support_sizes.back()
                                                                                                                                                    -
                                                                                                                                                    1633  )
                                                                                                                                                    -
                                                                                                                                                    1634  );
                                                                                                                                                    -
                                                                                                                                                    1635 
                                                                                                                                                    -
                                                                                                                                                    1636  // Weigth
                                                                                                                                                    -
                                                                                                                                                    1637  stats_support[
                                                                                                                                                    -
                                                                                                                                                    1638  stats_support_sizes_acc[nsupport] * (res.size() + 1u) +
                                                                                                                                                    -
                                                                                                                                                    1639  (res.size() + 1u) * i
                                                                                                                                                    -
                                                                                                                                                    1640  ] = stats_support_old[
                                                                                                                                                    -
                                                                                                                                                    1641  stats_support_sizes_acc[nsupport] * (k + 1u) +
                                                                                                                                                    -
                                                                                                                                                    1642  i * (k + 1u)
                                                                                                                                                    -
                                                                                                                                                    1643  ];
                                                                                                                                                    -
                                                                                                                                                    1644 
                                                                                                                                                    -
                                                                                                                                                    1645  // Copying the rest of the elements
                                                                                                                                                    -
                                                                                                                                                    1646  for (size_t j = 0u; j < res.size(); ++j)
                                                                                                                                                    -
                                                                                                                                                    1647  stats_support[
                                                                                                                                                    -
                                                                                                                                                    1648  stats_support_sizes_acc[nsupport] * (res.size() + 1u) +
                                                                                                                                                    -
                                                                                                                                                    1649  (res.size() + 1u) * i + j + 1u
                                                                                                                                                    -
                                                                                                                                                    1650  ] = res[j];
                                                                                                                                                    +
                                                                                                                                                    1626  // Applying transformation and adding to the new set
                                                                                                                                                    +
                                                                                                                                                    1627  auto res = transform_model_fun(
                                                                                                                                                    +
                                                                                                                                                    1628  &stats_support_old[
                                                                                                                                                    +
                                                                                                                                                    1629  stats_support_sizes_acc[nsupport] * (k + 1u) +
                                                                                                                                                    +
                                                                                                                                                    1630  i * (k + 1u) + 1u
                                                                                                                                                    +
                                                                                                                                                    1631  ],
                                                                                                                                                    +
                                                                                                                                                    1632  k
                                                                                                                                                    +
                                                                                                                                                    1633  );
                                                                                                                                                    +
                                                                                                                                                    1634 
                                                                                                                                                    +
                                                                                                                                                    1635  if (res.size() != transform_model_term_names.size())
                                                                                                                                                    +
                                                                                                                                                    1636  throw std::length_error(
                                                                                                                                                    +
                                                                                                                                                    1637  std::string("The transform vector from -transform_model_fun- ") +
                                                                                                                                                    +
                                                                                                                                                    1638  std::string(" does not match the size of ") +
                                                                                                                                                    +
                                                                                                                                                    1639  std::string("-transform_model_term_names-.")
                                                                                                                                                    +
                                                                                                                                                    1640  );
                                                                                                                                                    +
                                                                                                                                                    1641 
                                                                                                                                                    +
                                                                                                                                                    1642  // Resizing stats_support if the transform stats do not match the
                                                                                                                                                    +
                                                                                                                                                    1643  // previous size
                                                                                                                                                    +
                                                                                                                                                    1644  if ((nsupport == 0u) && (i == 0u) && (res.size() != k))
                                                                                                                                                    +
                                                                                                                                                    1645  stats_support.resize(
                                                                                                                                                    +
                                                                                                                                                    1646  (res.size() + 1) * (
                                                                                                                                                    +
                                                                                                                                                    1647  stats_support_sizes_acc.back() +
                                                                                                                                                    +
                                                                                                                                                    1648  stats_support_sizes.back()
                                                                                                                                                    +
                                                                                                                                                    1649  )
                                                                                                                                                    +
                                                                                                                                                    1650  );
                                                                                                                                                    1651 
                                                                                                                                                    -
                                                                                                                                                    1652  }
                                                                                                                                                    -
                                                                                                                                                    1653 
                                                                                                                                                    -
                                                                                                                                                    1654  }
                                                                                                                                                    -
                                                                                                                                                    1655 
                                                                                                                                                    -
                                                                                                                                                    1656  // Applying over the target statistics
                                                                                                                                                    -
                                                                                                                                                    1657  for (auto & s : stats_target)
                                                                                                                                                    -
                                                                                                                                                    1658  s = transform_model_fun(&s[0u], k);
                                                                                                                                                    -
                                                                                                                                                    1659 
                                                                                                                                                    -
                                                                                                                                                    1660  // Checking if there is support included
                                                                                                                                                    -
                                                                                                                                                    1661  if (with_pset)
                                                                                                                                                    -
                                                                                                                                                    1662  {
                                                                                                                                                    -
                                                                                                                                                    1663 
                                                                                                                                                    -
                                                                                                                                                    1664  // Applying it to the support
                                                                                                                                                    -
                                                                                                                                                    1665  for (auto s = 0u; s < pset_arrays.size(); ++s)
                                                                                                                                                    -
                                                                                                                                                    1666  {
                                                                                                                                                    -
                                                                                                                                                    1667  std::vector< double > new_stats;
                                                                                                                                                    -
                                                                                                                                                    1668 
                                                                                                                                                    -
                                                                                                                                                    1669  for (auto a = 0u; a < pset_arrays[s].size(); ++a)
                                                                                                                                                    -
                                                                                                                                                    1670  {
                                                                                                                                                    -
                                                                                                                                                    1671  // Computing the transformed version of the data
                                                                                                                                                    -
                                                                                                                                                    1672  auto tmpstats = transform_model_fun(
                                                                                                                                                    -
                                                                                                                                                    1673  &pset_stats[s][a * k], k
                                                                                                                                                    -
                                                                                                                                                    1674  );
                                                                                                                                                    +
                                                                                                                                                    1652  // Weigth
                                                                                                                                                    +
                                                                                                                                                    1653  stats_support[
                                                                                                                                                    +
                                                                                                                                                    1654  stats_support_sizes_acc[nsupport] * (res.size() + 1u) +
                                                                                                                                                    +
                                                                                                                                                    1655  (res.size() + 1u) * i
                                                                                                                                                    +
                                                                                                                                                    1656  ] = stats_support_old[
                                                                                                                                                    +
                                                                                                                                                    1657  stats_support_sizes_acc[nsupport] * (k + 1u) +
                                                                                                                                                    +
                                                                                                                                                    1658  i * (k + 1u)
                                                                                                                                                    +
                                                                                                                                                    1659  ];
                                                                                                                                                    +
                                                                                                                                                    1660 
                                                                                                                                                    +
                                                                                                                                                    1661  // Copying the rest of the elements
                                                                                                                                                    +
                                                                                                                                                    1662  for (size_t j = 0u; j < res.size(); ++j)
                                                                                                                                                    +
                                                                                                                                                    1663  stats_support[
                                                                                                                                                    +
                                                                                                                                                    1664  stats_support_sizes_acc[nsupport] * (res.size() + 1u) +
                                                                                                                                                    +
                                                                                                                                                    1665  (res.size() + 1u) * i + j + 1u
                                                                                                                                                    +
                                                                                                                                                    1666  ] = res[j];
                                                                                                                                                    +
                                                                                                                                                    1667 
                                                                                                                                                    +
                                                                                                                                                    1668  }
                                                                                                                                                    +
                                                                                                                                                    1669 
                                                                                                                                                    +
                                                                                                                                                    1670  }
                                                                                                                                                    +
                                                                                                                                                    1671 
                                                                                                                                                    +
                                                                                                                                                    1672  // Applying over the target statistics
                                                                                                                                                    +
                                                                                                                                                    1673  for (auto & s : stats_target)
                                                                                                                                                    +
                                                                                                                                                    1674  s = transform_model_fun(&s[0u], k);
                                                                                                                                                    1675 
                                                                                                                                                    -
                                                                                                                                                    1676  // Storing the new values
                                                                                                                                                    -
                                                                                                                                                    1677  for (auto p = 0u; p < k; ++p)
                                                                                                                                                    -
                                                                                                                                                    1678  new_stats.push_back(tmpstats[p]);
                                                                                                                                                    -
                                                                                                                                                    1679  }
                                                                                                                                                    -
                                                                                                                                                    1680 
                                                                                                                                                    -
                                                                                                                                                    1681  // Updating the dataset
                                                                                                                                                    -
                                                                                                                                                    1682  std::swap(pset_stats[s], new_stats);
                                                                                                                                                    -
                                                                                                                                                    1683 
                                                                                                                                                    -
                                                                                                                                                    1684  }
                                                                                                                                                    -
                                                                                                                                                    1685 
                                                                                                                                                    -
                                                                                                                                                    1686  }
                                                                                                                                                    -
                                                                                                                                                    1687 
                                                                                                                                                    -
                                                                                                                                                    1688  // And, resizing the last set of parameters
                                                                                                                                                    -
                                                                                                                                                    1689  for (auto & p : params_last)
                                                                                                                                                    -
                                                                                                                                                    1690  p.resize(transform_model_term_names.size());
                                                                                                                                                    +
                                                                                                                                                    1676  // Checking if there is support included
                                                                                                                                                    +
                                                                                                                                                    1677  if (with_pset)
                                                                                                                                                    +
                                                                                                                                                    1678  {
                                                                                                                                                    +
                                                                                                                                                    1679 
                                                                                                                                                    +
                                                                                                                                                    1680  // Applying it to the support
                                                                                                                                                    +
                                                                                                                                                    1681  for (auto s = 0u; s < pset_arrays.size(); ++s)
                                                                                                                                                    +
                                                                                                                                                    1682  {
                                                                                                                                                    +
                                                                                                                                                    1683  std::vector< double > new_stats;
                                                                                                                                                    +
                                                                                                                                                    1684 
                                                                                                                                                    +
                                                                                                                                                    1685  for (auto a = 0u; a < pset_arrays[s].size(); ++a)
                                                                                                                                                    +
                                                                                                                                                    1686  {
                                                                                                                                                    +
                                                                                                                                                    1687  // Computing the transformed version of the data
                                                                                                                                                    +
                                                                                                                                                    1688  auto tmpstats = transform_model_fun(
                                                                                                                                                    +
                                                                                                                                                    1689  &pset_stats[s][a * k], k
                                                                                                                                                    +
                                                                                                                                                    1690  );
                                                                                                                                                    1691 
                                                                                                                                                    -
                                                                                                                                                    1692  return;
                                                                                                                                                    -
                                                                                                                                                    1693 
                                                                                                                                                    -
                                                                                                                                                    1694 }
                                                                                                                                                    -
                                                                                                                                                    1695 
                                                                                                                                                    -
                                                                                                                                                    1696 #undef MODEL_TEMPLATE
                                                                                                                                                    -
                                                                                                                                                    1697 #undef MODEL_TEMPLATE_ARGS
                                                                                                                                                    -
                                                                                                                                                    1698 #undef MODEL_TYPE
                                                                                                                                                    +
                                                                                                                                                    1692  // Storing the new values
                                                                                                                                                    +
                                                                                                                                                    1693  for (auto p = 0u; p < k; ++p)
                                                                                                                                                    +
                                                                                                                                                    1694  new_stats.push_back(tmpstats[p]);
                                                                                                                                                    +
                                                                                                                                                    1695  }
                                                                                                                                                    +
                                                                                                                                                    1696 
                                                                                                                                                    +
                                                                                                                                                    1697  // Updating the dataset
                                                                                                                                                    +
                                                                                                                                                    1698  std::swap(pset_stats[s], new_stats);
                                                                                                                                                    1699 
                                                                                                                                                    -
                                                                                                                                                    1700 #endif
                                                                                                                                                    +
                                                                                                                                                    1700  }
                                                                                                                                                    +
                                                                                                                                                    1701 
                                                                                                                                                    +
                                                                                                                                                    1702  }
                                                                                                                                                    +
                                                                                                                                                    1703 
                                                                                                                                                    +
                                                                                                                                                    1704  // And, resizing the last set of parameters
                                                                                                                                                    +
                                                                                                                                                    1705  for (auto & p : params_last)
                                                                                                                                                    +
                                                                                                                                                    1706  p.resize(transform_model_term_names.size());
                                                                                                                                                    +
                                                                                                                                                    1707 
                                                                                                                                                    +
                                                                                                                                                    1708  return;
                                                                                                                                                    +
                                                                                                                                                    1709 
                                                                                                                                                    +
                                                                                                                                                    1710 }
                                                                                                                                                    +
                                                                                                                                                    1711 
                                                                                                                                                    +
                                                                                                                                                    1712 #undef MODEL_TEMPLATE
                                                                                                                                                    +
                                                                                                                                                    1713 #undef MODEL_TEMPLATE_ARGS
                                                                                                                                                    +
                                                                                                                                                    1714 #undef MODEL_TYPE
                                                                                                                                                    +
                                                                                                                                                    1715 
                                                                                                                                                    +
                                                                                                                                                    1716 #endif
                                                                                                                                                    printf_barry
                                                                                                                                                    #define printf_barry
                                                                                                                                                    Definition: barry-configuration.hpp:51
                                                                                                                                                    BARRY_SAFE_EXP
                                                                                                                                                    #define BARRY_SAFE_EXP
                                                                                                                                                    Definition: barry-configuration.hpp:33
                                                                                                                                                    BARRY_NCORES_ARG
                                                                                                                                                    #define BARRY_NCORES_ARG(default)
                                                                                                                                                    Definition: barry-macros.hpp:15
                                                                                                                                                    @@ -1793,6 +1809,7 @@
                                                                                                                                                    Model::size_unique
                                                                                                                                                    size_t size_unique() const noexcept
                                                                                                                                                    Definition: model-meat.hpp:1143
                                                                                                                                                    Model::transform_model_term_names
                                                                                                                                                    std::vector< std::string > transform_model_term_names
                                                                                                                                                    Definition: model-bones.hpp:127
                                                                                                                                                    Model::get_rengine
                                                                                                                                                    const std::mt19937 * get_rengine() const
                                                                                                                                                    Definition: model-meat.hpp:1518
                                                                                                                                                    +
                                                                                                                                                    Model::get_stats_support_sizes_acc
                                                                                                                                                    std::vector< size_t > * get_stats_support_sizes_acc()
                                                                                                                                                    Accumulated number of vectors included in the support.
                                                                                                                                                    Definition: model-meat.hpp:1567
                                                                                                                                                    Model::rules_dyn
                                                                                                                                                    Rules< Array_Type, Data_Rule_Dyn_Type > * rules_dyn
                                                                                                                                                    Definition: model-bones.hpp:95
                                                                                                                                                    Model::rules
                                                                                                                                                    Rules< Array_Type, Data_Rule_Type > * rules
                                                                                                                                                    Definition: model-bones.hpp:94
                                                                                                                                                    Model::counter_fun
                                                                                                                                                    StatsCounter< Array_Type, Data_Counter_Type > counter_fun
                                                                                                                                                    Definition: model-bones.hpp:97
                                                                                                                                                    @@ -1800,17 +1817,17 @@
                                                                                                                                                    Model::add_counter
                                                                                                                                                    void add_counter(Counter< Array_Type, Data_Counter_Type > &counter)
                                                                                                                                                    Definition: model-meat.hpp:363
                                                                                                                                                    Model::get_counters
                                                                                                                                                    Counters< Array_Type, Data_Counter_Type > * get_counters()
                                                                                                                                                    Definition: model-meat.hpp:1523
                                                                                                                                                    Model::stats_target
                                                                                                                                                    std::vector< std::vector< double > > stats_target
                                                                                                                                                    Target statistics of the model.
                                                                                                                                                    Definition: model-bones.hpp:66
                                                                                                                                                    -
                                                                                                                                                    Model::get_pset_probs
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_probs()
                                                                                                                                                    Definition: model-meat.hpp:1577
                                                                                                                                                    +
                                                                                                                                                    Model::get_pset_probs
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_probs()
                                                                                                                                                    Definition: model-meat.hpp:1593
                                                                                                                                                    Model::sample
                                                                                                                                                    Array_Type sample(const Array_Type &Array_, const std::vector< double > &params={})
                                                                                                                                                    Definition: model-meat.hpp:1290
                                                                                                                                                    Model::update_normalizing_constants
                                                                                                                                                    void update_normalizing_constants(const std::vector< double > &params,)
                                                                                                                                                    Computes the normalizing constant for a given set of parameters.
                                                                                                                                                    Definition: model-meat.hpp:134
                                                                                                                                                    Model::add_rule_dyn
                                                                                                                                                    void add_rule_dyn(Rule< Array_Type, Data_Rule_Dyn_Type > &rule)
                                                                                                                                                    Definition: model-meat.hpp:446
                                                                                                                                                    Model::stats_support
                                                                                                                                                    std::vector< double > stats_support
                                                                                                                                                    Sufficient statistics of the model (support)
                                                                                                                                                    Definition: model-bones.hpp:62
                                                                                                                                                    Model::store_psets
                                                                                                                                                    void store_psets() noexcept
                                                                                                                                                    Definition: model-meat.hpp:350
                                                                                                                                                    Model::conditional_prob
                                                                                                                                                    double conditional_prob(const Array_Type &Array_, const std::vector< double > &params, size_t i, size_t j)
                                                                                                                                                    Conditional probability ("Gibbs sampler")
                                                                                                                                                    Definition: model-meat.hpp:1485
                                                                                                                                                    -
                                                                                                                                                    Model::get_pset_stats
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_stats()
                                                                                                                                                    Statistics of the support(s)
                                                                                                                                                    Definition: model-meat.hpp:1571
                                                                                                                                                    +
                                                                                                                                                    Model::get_pset_stats
                                                                                                                                                    std::vector< std::vector< double > > * get_pset_stats()
                                                                                                                                                    Statistics of the support(s)
                                                                                                                                                    Definition: model-meat.hpp:1587
                                                                                                                                                    Model::operator=
                                                                                                                                                    Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > & operator=(const Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > &Model_)
                                                                                                                                                    Definition: model-meat.hpp:298
                                                                                                                                                    Model::get_stats_target
                                                                                                                                                    std::vector< std::vector< double > > * get_stats_target()
                                                                                                                                                    Raw pointers to the support and target statistics.
                                                                                                                                                    Definition: model-meat.hpp:1544
                                                                                                                                                    -
                                                                                                                                                    Model::get_pset_arrays
                                                                                                                                                    std::vector< std::vector< Array_Type > > * get_pset_arrays()
                                                                                                                                                    Definition: model-meat.hpp:1565
                                                                                                                                                    +
                                                                                                                                                    Model::get_pset_arrays
                                                                                                                                                    std::vector< std::vector< Array_Type > > * get_pset_arrays()
                                                                                                                                                    Definition: model-meat.hpp:1581
                                                                                                                                                    Model::get_support_fun
                                                                                                                                                    Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type > * get_support_fun()
                                                                                                                                                    Definition: model-meat.hpp:1539
                                                                                                                                                    Model::gen_key
                                                                                                                                                    std::vector< double > gen_key(const Array_Type &Array_)
                                                                                                                                                    Definition: model-meat.hpp:356
                                                                                                                                                    Model::arrays2support
                                                                                                                                                    std::vector< size_t > arrays2support
                                                                                                                                                    Definition: model-bones.hpp:67
                                                                                                                                                    @@ -1819,7 +1836,7 @@
                                                                                                                                                    Model::colnames
                                                                                                                                                    std::vector< std::string > colnames() const
                                                                                                                                                    Definition: model-meat.hpp:1193
                                                                                                                                                    Model::likelihood
                                                                                                                                                    double likelihood(const std::vector< double > &params, const size_t &i, bool as_log=false, bool no_update_normconst=false)
                                                                                                                                                    Definition: model-meat.hpp:650
                                                                                                                                                    Model::stats_support_sizes_acc
                                                                                                                                                    std::vector< size_t > stats_support_sizes_acc
                                                                                                                                                    Accumulated number of vectors included in the support.
                                                                                                                                                    Definition: model-bones.hpp:64
                                                                                                                                                    -
                                                                                                                                                    Model::get_stats_support
                                                                                                                                                    std::vector< double > * get_stats_support()
                                                                                                                                                    Definition: model-meat.hpp:1551
                                                                                                                                                    +
                                                                                                                                                    Model::get_stats_support
                                                                                                                                                    std::vector< double > * get_stats_support()
                                                                                                                                                    Sufficient statistics of the support(s)
                                                                                                                                                    Definition: model-meat.hpp:1551
                                                                                                                                                    Model::set_rules
                                                                                                                                                    void set_rules(Rules< Array_Type, Data_Rule_Type > *rules_)
                                                                                                                                                    Definition: model-meat.hpp:428
                                                                                                                                                    Model::pset_stats
                                                                                                                                                    std::vector< std::vector< double > > pset_stats
                                                                                                                                                    Statistics of the support(s)
                                                                                                                                                    Definition: model-bones.hpp:84
                                                                                                                                                    Model::nrules
                                                                                                                                                    size_t nrules() const noexcept
                                                                                                                                                    Definition: model-meat.hpp:1163
                                                                                                                                                    @@ -1837,14 +1854,15 @@
                                                                                                                                                    Model::set_rules_dyn
                                                                                                                                                    void set_rules_dyn(Rules< Array_Type, Data_Rule_Dyn_Type > *rules_)
                                                                                                                                                    Definition: model-meat.hpp:470
                                                                                                                                                    Model::pset_arrays
                                                                                                                                                    std::vector< std::vector< Array_Type > > pset_arrays
                                                                                                                                                    Arrays of the support(s)
                                                                                                                                                    Definition: model-bones.hpp:83
                                                                                                                                                    Model::transform_model_fun
                                                                                                                                                    std::function< std::vector< double >double *, size_t k)> transform_model_fun
                                                                                                                                                    Transformation of the model.
                                                                                                                                                    Definition: model-bones.hpp:125
                                                                                                                                                    -
                                                                                                                                                    Model::get_arrays2support
                                                                                                                                                    std::vector< size_t > * get_arrays2support()
                                                                                                                                                    Definition: model-meat.hpp:1558
                                                                                                                                                    +
                                                                                                                                                    Model::get_arrays2support
                                                                                                                                                    std::vector< size_t > * get_arrays2support()
                                                                                                                                                    Definition: model-meat.hpp:1574
                                                                                                                                                    Model::keys2support
                                                                                                                                                    MapVec_type< double, size_t > keys2support
                                                                                                                                                    Map of types of arrays to support sets.
                                                                                                                                                    Definition: model-bones.hpp:74
                                                                                                                                                    Model::stats_support_sizes
                                                                                                                                                    std::vector< size_t > stats_support_sizes
                                                                                                                                                    Number of vectors included in the support.
                                                                                                                                                    Definition: model-bones.hpp:63
                                                                                                                                                    Model::get_normalizing_constants
                                                                                                                                                    std::vector< double > & get_normalizing_constants()
                                                                                                                                                    Definition: model-meat.hpp:1000
                                                                                                                                                    Model::normalizing_constants
                                                                                                                                                    std::vector< double > normalizing_constants
                                                                                                                                                    Definition: model-bones.hpp:102
                                                                                                                                                    +
                                                                                                                                                    Model::get_stats_support_sizes
                                                                                                                                                    std::vector< size_t > * get_stats_support_sizes()
                                                                                                                                                    Number of vectors included in the support.
                                                                                                                                                    Definition: model-meat.hpp:1559
                                                                                                                                                    Model::first_calc_done
                                                                                                                                                    std::vector< bool > first_calc_done
                                                                                                                                                    Definition: model-bones.hpp:103
                                                                                                                                                    -
                                                                                                                                                    Model::set_transform_model
                                                                                                                                                    void set_transform_model(std::function< std::vector< double >(double *, size_t)> fun, std::vector< std::string > names)
                                                                                                                                                    Set the transform_model_fun object.
                                                                                                                                                    Definition: model-meat.hpp:1583
                                                                                                                                                    +
                                                                                                                                                    Model::set_transform_model
                                                                                                                                                    void set_transform_model(std::function< std::vector< double >(double *, size_t)> fun, std::vector< std::string > names)
                                                                                                                                                    Set the transform_model_fun object.
                                                                                                                                                    Definition: model-meat.hpp:1599
                                                                                                                                                    Model::counters
                                                                                                                                                    Counters< Array_Type, Data_Counter_Type > * counters
                                                                                                                                                    Definition: model-bones.hpp:93
                                                                                                                                                    Model::get_pset
                                                                                                                                                    const std::vector< Array_Type > * get_pset(const size_t &i)
                                                                                                                                                    Definition: model-meat.hpp:1008
                                                                                                                                                    Model::add_rule
                                                                                                                                                    void add_rule(Rule< Array_Type, Data_Rule_Type > &rule)
                                                                                                                                                    Definition: model-meat.hpp:418
                                                                                                                                                    @@ -1881,7 +1899,7 @@ diff --git a/modules.html b/modules.html index fca62bce3..fe7d6c83f 100644 --- a/modules.html +++ b/modules.html @@ -110,7 +110,7 @@ diff --git a/namespace_c_h_e_c_k.html b/namespace_c_h_e_c_k.html index d77a6812e..645baf8c6 100644 --- a/namespace_c_h_e_c_k.html +++ b/namespace_c_h_e_c_k.html @@ -186,7 +186,7 @@

                                                                                                                                                    • CHECK
                                                                                                                                                      • -
                                                                                                                                                    • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                      • +
                                                                                                                                                    • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                    diff --git a/namespace_e_x_i_s_t_s.html b/namespace_e_x_i_s_t_s.html index 692f4802d..193789fd4 100644 --- a/namespace_e_x_i_s_t_s.html +++ b/namespace_e_x_i_s_t_s.html @@ -240,7 +240,7 @@

                                                                                                                                                    • EXISTS
                                                                                                                                                      • -
                                                                                                                                                    • Generated on Wed Oct 4 2023 18:13:13 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                      • +
                                                                                                                                                    • Generated on Wed Oct 4 2023 18:29:41 for barry: Your go-to motif accountant by doxygen 1.9.1
                                                                                                                                                    diff --git a/namespacebarry.html b/namespacebarry.html index 4312cc046..002b99e3f 100644 --- a/namespacebarry.html +++ b/namespacebarry.html @@ -116,7 +116,7 @@ diff --git a/namespacebarry_1_1counters.html b/namespacebarry_1_1counters.html index b39f4c8c4..8a5666b20 100644 --- a/namespacebarry_1_1counters.html +++ b/namespacebarry_1_1counters.html @@ -115,7 +115,7 @@ diff --git a/namespacebarry_1_1counters_1_1network.html b/namespacebarry_1_1counters_1_1network.html index 9f0a5ba0d..b73825abd 100644 --- a/namespacebarry_1_1counters_1_1network.html +++ b/namespacebarry_1_1counters_1_1network.html @@ -102,7 +102,7 @@ diff --git a/namespacedefm.html b/namespacedefm.html index 0f497d3c6..81dc2f146 100644 --- a/namespacedefm.html +++ b/namespacedefm.html @@ -102,7 +102,7 @@ diff --git a/namespacegeese.html b/namespacegeese.html index 9ee787a9f..3a17f5a8b 100644 --- a/namespacegeese.html +++ b/namespacegeese.html @@ -102,7 +102,7 @@ diff --git a/namespacemembers.html b/namespacemembers.html index 783de0eb5..6d1c8bb8a 100644 --- a/namespacemembers.html +++ b/namespacemembers.html @@ -124,7 +124,7 @@ diff --git a/namespacemembers_vars.html b/namespacemembers_vars.html index d51dc9e23..7b78d8042 100644 --- a/namespacemembers_vars.html +++ b/namespacemembers_vars.html @@ -124,7 +124,7 @@ diff --git a/navtreedata.js b/navtreedata.js index 9a8084331..5ef0145bd 100644 --- a/navtreedata.js +++ b/navtreedata.js @@ -59,9 +59,9 @@ var NAVTREEINDEX = "annotated.html", "class_b_array_dense.html#abff8ef2f4bcd467ebbbb8ac3089fcd52", "class_freq_table.html#a7ed627807a61c484243636137609abcd", -"class_rules.html#aa78e9abf82ed8a0e4320d570191c8968", -"geese_8hpp.html", -"group__rules-phylo.html#ga83c21423b25668b2343196f11fdc4630" +"class_rules.html#aa6e5d575803251a3e599677a395a2c1e", +"geese_2counters_8hpp.html", +"group__rules-phylo.html#ga7f779ce019f2eaa30af381500384d393" ]; var SYNCONMSG = 'click to disable panel synchronisation'; diff --git a/navtreeindex2.js b/navtreeindex2.js index f2f9496a9..93cf6e145 100644 --- a/navtreeindex2.js +++ b/navtreeindex2.js @@ -58,85 +58,87 @@ var NAVTREEINDEX2 = "class_geese.html#aed67f1c9b9771071535396ab0220d410":[0,1,2,1], "class_geese.html#af2d4bac42cc7c8287fb6853d50882115":[0,1,2,20], "class_model.html":[0,1,0], -"class_model.html#a0261a55996a1707b9bae97544f1fabf8":[0,1,0,49], -"class_model.html#a029716dd943b3fc3de88eead66404b16":[0,1,0,78], +"class_model.html#a0261a55996a1707b9bae97544f1fabf8":[0,1,0,51], +"class_model.html#a029716dd943b3fc3de88eead66404b16":[0,1,0,80], "class_model.html#a02cac4f649946705bfb4d69bc3a3576f":[0,1,0,23], -"class_model.html#a04e9eb43fbe49a24faa3d93543c0df51":[0,1,0,59], -"class_model.html#a085429b8f8d8d81a7f742fdc3deceeee":[0,1,0,30], -"class_model.html#a11d9090903bfe8b35db92fe2579c2de3":[0,1,0,70], 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