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add reference to TBEVnext Virus Evolution paper
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mtw authored Dec 9, 2022
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# TBEVnext: Molecular epidemiology of Tick-borne encephalitis virus

Michael T. Wolfinger<sup>1,2</sup>

<sub><sup>1</sup>Department of Theoretical Chemistry, University of Vienna, Vienna, Austria</sub><br/>
<sub><sup>2</sup>Research Group Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, Vienna, Austria</sub><br/>

This repository contains a [nextstrain](https://nextstrain.org) community build of Tick-borne encephalitis virus (TBEV) that is accessible [here](https://nextstrain.org/community/ViennaRNA/TBEVnext). Alternatively, you can drag & drop the [TBEV.json](auspice/TBEV.json) file directly at [auspice.us](https://auspice.us).

Data in this repository rely on publicly available TBEV genomes from NCBI Genbank. New releases are published on an irregular basis when a reasonable amount of novel sequences are available.

## Citation
If you use data provided in this repository in your own work please link back to this site and cite the following publications - Thank you!

- **Evolutionary traits of Tick-borne encephalitis virus: Pervasive non-coding RNA structure conservation and molecular epidemiology**
_Lena S. Kutschera, Michael T. Wolfinger_
Virus Evol. (8):1 veac051 (2022) [PDF](https://michaelwolfinger.com/files/papers/Kutschera-2022.pdf) | [doi:10.1093/ve/veac051](https://doi.org/10.1093/ve/veac051)

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