run release 2023-10-26

VirtualFlyBrain · Oct 26, 2023 · 8456e04 · 8456e04
1 parent bb4f983
commit 8456e04
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Showing 15 changed files with 7,339 additions and 14,039 deletions.
diff --git a/vfbext-base.json b/vfbext-base.json
@@ -16,15 +16,15 @@
         "val" : "https://creativecommons.org/licenses/by/4.0/</terms:license>"
       }, {
         "pred" : "http://www.geneontology.org/formats/oboInOwl#date",
-        "val" : "15:08:2023 10:37"
+        "val" : "26:10:2023 13:58"
       }, {
         "pred" : "http://www.w3.org/2000/01/rdf-schema#comment",
         "val" : "VFB extension ontology"
       }, {
         "pred" : "http://www.w3.org/2002/07/owl#versionInfo",
-        "val" : "2023-08-15"
+        "val" : "2023-10-26"
       } ],
-      "version" : "http://purl.obolibrary.org/obo/vfbext/releases/2023-08-15/vfbext-base.json"
+      "version" : "http://purl.obolibrary.org/obo/vfbext/releases/2023-10-26/vfbext-base.json"
     },
     "nodes" : [ {
       "id" : "http://purl.obolibrary.org/obo/C888C3DB-AEFA-447F-BD4C-858DFE33DBE7",
@@ -155,6 +155,10 @@
       "type" : "PROPERTY"
     } ],
     "edges" : [ {
+      "sub" : "http://purl.obolibrary.org/obo/SO_0000110",
+      "pred" : "is_a",
+      "obj" : "http://purl.obolibrary.org/obo/BFO_0000040"
+    }, {
       "sub" : "http://purl.obolibrary.org/obo/fbbt/vfb/VFB_10000005",
       "pred" : "is_a",
       "obj" : "http://purl.obolibrary.org/obo/BFO_0000004"

diff --git a/vfbext-base.obo b/vfbext-base.obo
@@ -1,6 +1,6 @@
 format-version: 1.2
-data-version: vfbext/releases/2023-08-15/vfbext-base.owl
-date: 15:08:2023 10:37
+data-version: vfbext/releases/2023-10-26/vfbext-base.owl
+date: 26:10:2023 13:58
 subsetdef: clone ""
 subsetdef: neuron ""
 subsetdef: ns_part ""
@@ -12,7 +12,11 @@ property_value: http://purl.org/dc/elements/1.1/description "An ontology of misc
 property_value: http://purl.org/dc/elements/1.1/title "VFB Extension Ontology" xsd:string
 property_value: http://purl.org/dc/elements/1.1/type IAO:8000001
 property_value: http://purl.org/dc/terms/license "https://creativecommons.org/licenses/by/4.0/</terms:license>" xsd:string
-property_value: owl:versionInfo "2023-08-15" xsd:string
+property_value: owl:versionInfo "2023-10-26" xsd:string
+
+[Term]
+id: SO:0000110
+is_a: BFO:0000040
 
 [Term]
 id: VFB:10000005

diff --git a/vfbext-base.owl b/vfbext-base.owl
@@ -11,17 +11,16 @@
      xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
      xmlns:vfb2="http://purl.obolibrary.org/obo/fbbt/vfb#"
      xmlns:terms="http://purl.org/dc/terms/"
-     xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/vfbext/vfbext-base.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/vfbext/releases/2023-08-15/vfbext-base.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/vfbext/releases/2023-10-26/vfbext-base.owl"/>
         <dc:description>An ontology of miscellaneous terms for data annotation in VFB.</dc:description>
         <dc:title>VFB Extension Ontology</dc:title>
         <dc:type rdf:resource="http://purl.obolibrary.org/obo/IAO_8000001"/>
         <terms:license>https://creativecommons.org/licenses/by/4.0/&lt;/terms:license&gt;</terms:license>
-        <oboInOwl:date>15:08:2023 10:37</oboInOwl:date>
+        <oboInOwl:date>26:10:2023 13:58</oboInOwl:date>
         <rdfs:comment>VFB extension ontology</rdfs:comment>
-        <owl:versionInfo>2023-08-15</owl:versionInfo>
+        <owl:versionInfo>2023-10-26</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -37,12 +36,6 @@
 
 
 
-    <!-- http://protege.stanford.edu/plugins/owl/protege#defaultLanguage -->
-
-    <owl:AnnotationProperty rdf:about="http://protege.stanford.edu/plugins/owl/protege#defaultLanguage"/>
-
-
-
     <!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
 
     <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115"/>
@@ -97,42 +90,12 @@
 
 
 
-    <!-- http://purl.org/dc/elements/1.1/contributor -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/contributor"/>
-
-
-
-    <!-- http://purl.org/dc/elements/1.1/creator -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/creator"/>
-
-
-
-    <!-- http://purl.org/dc/elements/1.1/date -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/date"/>
-
-
-
     <!-- http://purl.org/dc/elements/1.1/description -->
 
     <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/description"/>
 
 
 
-    <!-- http://purl.org/dc/elements/1.1/format -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/format"/>
-
-
-
-    <!-- http://purl.org/dc/elements/1.1/subject -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/subject"/>
-
-
-
     <!-- http://purl.org/dc/elements/1.1/title -->
 
     <owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/title"/>
@@ -169,12 +132,6 @@
 
 
 
-    <!-- http://purl.org/dc/terms/title -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/title"/>
-
-
-
     <!-- http://www.geneontology.org/formats/oboInOwl#SubsetProperty -->
 
     <owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#SubsetProperty"/>
@@ -211,23 +168,6 @@
 
 
 
-    <!-- 
-    ///////////////////////////////////////////////////////////////////////////////////////
-    //
-    // Datatypes
-    //
-    ///////////////////////////////////////////////////////////////////////////////////////
-     -->
-
-
-
-
-    <!-- http://www.w3.org/2001/XMLSchema#date -->
-
-    <rdfs:Datatype rdf:about="http://www.w3.org/2001/XMLSchema#date"/>
-
-
-
     <!-- 
     ///////////////////////////////////////////////////////////////////////////////////////
     //
@@ -363,6 +303,12 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/BFO_0000040 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"/>
+
+
+
     <!-- http://purl.obolibrary.org/obo/CARO_0030002 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/CARO_0030002"/>
@@ -381,6 +327,14 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/SO_0000110 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/SO_0000110">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/>
+    </owl:Class>
+
+
+
     <!-- http://purl.obolibrary.org/obo/fbbt/vfb/VFB_10000005 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/fbbt/vfb/VFB_10000005">
@@ -460,5 +414,5 @@
 
 
 
-<!-- Generated by the OWL API (version 4.5.25) https://github.com/owlcs/owlapi -->
+<!-- Generated by the OWL API (version 4.5.26) https://github.com/owlcs/owlapi -->