Releases: WGLab/LongReadSum
Releases · WGLab/LongReadSum
v1.4.0
- Add POD5 support
- Add support for BAM files with base modifications
- Add TIN score support for RNASeq files
- Add RRMS BAM file support
- VBZ plugin is included in the conda environment
- Fix errors with guppy and dorado FAST5 files
- Fix read length histogram bin labels
- Update the README documentation
v1.3.1
- Add RRMS support by generating QC for both accepted and rejected reads given the CSV with this information.
- Fix base quality histogram integer overflow error with large integers
- Add option to plot specific read IDs for FAST5 signal QC
- Add BAM files with base modifications and RNASeq data to the Sample Data for unit tests
v1.3.0
- Reduce dependencies.
- All plots are in dynamic HTML.
- Fix fastq file, NM tag, and log file errors
v1.2.0
Fix memory leaks in the bam file threading implementation.
Reformat the package for bioconda submission.
v1.0.1
Add FAST5 VBZ compression support
Update HTML report styles
v1.0.0
Refactored the project structure.
Implemented automated build and unit testing.
Added support for FAST5 files.
Added a FAST5 signal data QC option.
Added a Docker installation option.
Fix N50 implementations for FASTQ, BAM, and seqtxt files.
v0.1.0
Initial release with sample input data for testing