From 97287d34b45d308cfb7d450d1e77412bcd4af5f5 Mon Sep 17 00:00:00 2001 From: Mian Umair Ahsan <35819083+umahsn@users.noreply.github.com> Date: Wed, 27 Mar 2024 18:29:05 -0400 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index c7724a4..50785d3 100644 --- a/README.md +++ b/README.md @@ -6,7 +6,7 @@ NanoCaller is a computational method that integrates long reads in deep convolut NanoCaller is distributed under the [MIT License by Wang Genomics Lab](https://wglab.mit-license.org/). ## Latest Updates -_**v3.4.2** (March 27 2024)_: CRAM files are supported in input as well as in phased output if whatshap version>=2 is being used with NanoCaller. +_**v3.5.0** (March 27 2024)_: CRAM files are supported in input as well as in phased output if whatshap version>=2 is being used with NanoCaller. _**v3.4.0** (July 31 2023)_: VCF files contain total and strand-specific allele depths for SNP calls from SNP calling models. A new mode for short ONT reads (5-10kbp) added. `--phase_qual_score` parameter filters out low quality SNP calls from phasing by WhatsHap; these SNP calls are kept in the output, but neither phased nor used for phasing reads.