Releases: WGLab/NanoCaller
Releases · WGLab/NanoCaller
v0.3.0: new parallelization framework, and docker support added
For whole genome variant calling, we are replacing python's multiprocessing module with GNU's parallel command for significant speed up. We have also added support for Docker, by including a Dockerfile for building NanoCaller image locally, as well as uploading a tar zipped docker image in this release as 'nanocaller_docker.tar.gz'.
v0.2.0
We have added functionality for specifying regions to include and exclude via BED files with default options for excluding centromere and telomere regions. This will allow a significant speed up in running NanoCaller. We have also streamlined parallel processing used within NanoCaller to maximize the use of computing power, and implemented a more detailed logging of NanoCaller runs.