This is a package to make it easier to access GNPS Data from various web resources.

1. GNPS Task Data
2. ReDU Repository Data
3. Structure API
4. MassQL Data Conversions
5. Listing Datasets from public Datasets

Installation

Use the following command

pip install git+https://github.com/Wang-Bioinformatics-Lab/GNPSDataPackage.git

Usage

FBMN

How to get the quantification information

from gnpsdata import workflow_fbmn

quant_df = workflow_fbmn.get_quantification_dataframe(task, gnps2=True)
metadata_df = workflow_fbmn.get_metadata_dataframe(task, gnps2=True)