Histogram of read lengths after log transformation
+Weighted Histogram of read lengths
+Weighted Histogram of read lengths after log transformation
+ +Read lengths vs Average read quality plot using dots
+Read lengths vs Average read quality plot using a kernel density estimation
+General summary: | +|
Mean read length: 4,286.2 | +|
Mean read quality: 10.2 | +|
Median read length: 1,845.0 | +|
Median read quality: 10.5 | +|
Number of reads: 3,991,650.0 | +|
Read length N50: 10,140.0 | +|
Total bases: 17,109,161,879.0 | +|
Number, percentage and megabases of reads above quality cutoffs | +|
>Q5: | 3991650 (100.0%) 17109.2Mb | +
>Q7: | 3991649 (100.0%) 17109.2Mb | +
>Q10: | 2473495 (62.0%) 11731.4Mb | +
>Q12: | 244872 (6.1%) 789.4Mb | +
>Q15: | 0 (0.0%) 0.0Mb | +
Top 5 highest mean basecall quality scores and their read lengths | +|
1: | 14.9 (196) | +
2: | 14.8 (649) | +
3: | 14.7 (607) | +
4: | 14.7 (363) | +
5: | 14.6 (620) | +
Top 5 longest reads and their mean basecall quality score | +|
1: | 301857 (10.7) | +
2: | 265670 (9.4) | +
3: | 250054 (10.4) | +
4: | 238373 (10.0) | +
5: | 230377 (10.3) | +